BLASTX nr result

ID: Coptis23_contig00003469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003469
         (1387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278742.1| PREDICTED: lysM domain-containing GPI-anchor...   140   6e-31
gb|AEJ08745.1| RSI3 [Solanum tuberosum]                               140   1e-30
ref|XP_002525811.1| LysM domain GPI-anchored protein 2 precursor...   139   1e-30
ref|XP_003524821.1| PREDICTED: lysM domain-containing GPI-anchor...   138   4e-30
gb|AAO32065.1| Erwinia induced protein 1 [Solanum tuberosum]          137   9e-30

>ref|XP_002278742.1| PREDICTED: lysM domain-containing GPI-anchored protein 2 [Vitis
            vinifera] gi|297744534|emb|CBI37796.3| unnamed protein
            product [Vitis vinifera]
          Length = 357

 Score =  140 bits (354), Expect = 6e-31
 Identities = 71/115 (61%), Positives = 90/115 (78%), Gaps = 1/115 (0%)
 Frame = -2

Query: 1386 VQQIANDYGTNESVLLSLNGLADANDLKAGAVLDVPLKACTSMISNN-SLDYPLLVPNGT 1210
            V+ IA +YGT +  LL LNG+ D  +L+AGAVLDVPLKACTSM++NN SLDYPLLV NGT
Sbjct: 181  VELIAEEYGTTQETLLRLNGITDPKNLQAGAVLDVPLKACTSMVANNNSLDYPLLVANGT 240

Query: 1209 YTFTANNCVRCKCDAANNMRLQCEPSPKEVKITKWLQCPSMQCESPVTLSLGNTS 1045
            Y +TAN+CV CKCD+ANN  LQCEPS  ++K++    CPSMQCE   +L +GN++
Sbjct: 241  YVYTANSCVMCKCDSANNWTLQCEPS--QLKLSN-RTCPSMQCEGS-SLYIGNST 291


>gb|AEJ08745.1| RSI3 [Solanum tuberosum]
          Length = 354

 Score =  140 bits (352), Expect = 1e-30
 Identities = 67/114 (58%), Positives = 81/114 (71%)
 Frame = -2

Query: 1386 VQQIANDYGTNESVLLSLNGLADANDLKAGAVLDVPLKACTSMISNNSLDYPLLVPNGTY 1207
            ++ IA  Y  ++  LL LNGLA   +L AGAVLDVPLKAC S +SN SLDYPLLVPN TY
Sbjct: 177  IEAIAQQYNVSQETLLRLNGLASPRELLAGAVLDVPLKACQSTVSNASLDYPLLVPNDTY 236

Query: 1206 TFTANNCVRCKCDAANNMRLQCEPSPKEVKITKWLQCPSMQCESPVTLSLGNTS 1045
             FTA NCV CKCDAA+N  LQC+PS  ++K + W  CPSMQC+    L +GN +
Sbjct: 237  VFTAANCVTCKCDAASNWTLQCQPS--QIKSSLWKTCPSMQCQGLDNLYIGNVT 288


>ref|XP_002525811.1| LysM domain GPI-anchored protein 2 precursor, putative [Ricinus
            communis] gi|223534898|gb|EEF36585.1| LysM domain
            GPI-anchored protein 2 precursor, putative [Ricinus
            communis]
          Length = 361

 Score =  139 bits (351), Expect = 1e-30
 Identities = 62/114 (54%), Positives = 84/114 (73%)
 Frame = -2

Query: 1386 VQQIANDYGTNESVLLSLNGLADANDLKAGAVLDVPLKACTSMISNNSLDYPLLVPNGTY 1207
            ++ IA +YGT++ +L+SLN   +   L AG +LDVPL+AC S ++ +SLDYPLLVPNGTY
Sbjct: 181  LEVIAEEYGTSKDILMSLNNGVNDTSLLAGQILDVPLQACNSSVTTSSLDYPLLVPNGTY 240

Query: 1206 TFTANNCVRCKCDAANNMRLQCEPSPKEVKITKWLQCPSMQCESPVTLSLGNTS 1045
             FTAN+CVRCKCD+ANN  LQCEPS   +  + W  CP M+C+    LS+GN++
Sbjct: 241  AFTANSCVRCKCDSANNWILQCEPSGLTIANSTWSTCPPMKCDGADNLSIGNST 294


>ref|XP_003524821.1| PREDICTED: lysM domain-containing GPI-anchored protein 2-like
            [Glycine max]
          Length = 375

 Score =  138 bits (347), Expect = 4e-30
 Identities = 60/108 (55%), Positives = 85/108 (78%)
 Frame = -2

Query: 1386 VQQIANDYGTNESVLLSLNGLADANDLKAGAVLDVPLKACTSMISNNSLDYPLLVPNGTY 1207
            V+ IA ++GT + +LL+LNG++D  +L+AG +LDVPL+AC+S + N+SLDYPLLVPN TY
Sbjct: 190  VEGIAEEFGTTQQILLNLNGISDPKNLQAGQILDVPLQACSSNVKNDSLDYPLLVPNATY 249

Query: 1206 TFTANNCVRCKCDAANNMRLQCEPSPKEVKITKWLQCPSMQCESPVTL 1063
             +TA+ CV+CKCD++NN  LQCEPS  ++K T W  CPSM+C + V +
Sbjct: 250  AYTAHECVKCKCDSSNNFILQCEPS--QLKPTNWSVCPSMECSANVLI 295


>gb|AAO32065.1| Erwinia induced protein 1 [Solanum tuberosum]
          Length = 354

 Score =  137 bits (344), Expect = 9e-30
 Identities = 66/114 (57%), Positives = 80/114 (70%)
 Frame = -2

Query: 1386 VQQIANDYGTNESVLLSLNGLADANDLKAGAVLDVPLKACTSMISNNSLDYPLLVPNGTY 1207
            ++ IA  Y  ++  LL LNGLA   +L AGAVLDVPLKAC S +SN SLDYPLLVPN TY
Sbjct: 177  IEAIAQQYNVSQETLLRLNGLASPKELLAGAVLDVPLKACQSTVSNASLDYPLLVPNDTY 236

Query: 1206 TFTANNCVRCKCDAANNMRLQCEPSPKEVKITKWLQCPSMQCESPVTLSLGNTS 1045
             FTA NCV CKCDAA+N  LQC+PS  ++K + W  CPSMQC+    L + N +
Sbjct: 237  VFTAANCVTCKCDAASNWTLQCQPS--QIKSSLWKTCPSMQCQGLDNLYIENVT 288


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