BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003465
         (1222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25819.1| unknown [Picea sitchensis]                             460   e-127
ref|XP_003568783.1| PREDICTED: proteasome subunit beta type-7-B-...   456   e-126
ref|XP_002461734.1| hypothetical protein SORBIDRAFT_02g007210 [S...   449   e-124
ref|NP_001149857.1| LOC100283485 [Zea mays] gi|194702548|gb|ACF8...   449   e-124
gb|ACG40493.1| proteasome subunit beta type 7-A precursor [Zea m...   447   e-123

>gb|ABK25819.1| unknown [Picea sitchensis]
          Length = 273

 Score =  460 bits (1184), Expect = e-127
 Identities = 222/264 (84%), Positives = 246/264 (93%)
 Frame = +3

Query: 87  QGGFNFDLCRRNEMLMIKSGFKPPTYRKTGTTIVGLVFQDGIILGADTRATEGPIVADKN 266
           +GGF+FDLCRRNEML  K G + P++RKTGTTIVGLVFQDG+ILGADTRATEGPIV DKN
Sbjct: 11  KGGFSFDLCRRNEMLA-KKGVQSPSFRKTGTTIVGLVFQDGVILGADTRATEGPIVCDKN 69

Query: 267 CEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRQATGRDSRVVTALTLLKTHLFGY 446
           CEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQL+LHR ATGR+SRVVTALTLLK+HL+ Y
Sbjct: 70  CEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLELHRYATGRESRVVTALTLLKSHLYSY 129

Query: 447 QGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPYATMGSGSLAAMAMFESNYKEGLSRDE 626
           QGHVSAALVLGGVD TGPHLHTIYPHGSTDTLP+ATMGSGSLAAMAMFES Y+EG++R+E
Sbjct: 130 QGHVSAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESRYREGMTREE 189

Query: 627 GIKLVCQAICAGIFNDLGSGSNVDVCVITKGKTDYLRNYQLPNPRTYVSSKGYSFARGQT 806
           GIKLVCQAIC+GIFNDLGSGSNVDVCVITKG+ +YLRNY+LPNPRTYVSSKGYSFA+G T
Sbjct: 190 GIKLVCQAICSGIFNDLGSGSNVDVCVITKGQKEYLRNYELPNPRTYVSSKGYSFAKGHT 249

Query: 807 EVLSTRIIPLMANLVLAEGDEMEE 878
           EVLST+I PL  ++ + EGD MEE
Sbjct: 250 EVLSTKITPLKEHVKIIEGDAMEE 273


>ref|XP_003568783.1| PREDICTED: proteasome subunit beta type-7-B-like [Brachypodium
           distachyon]
          Length = 272

 Score =  456 bits (1174), Expect = e-126
 Identities = 222/264 (84%), Positives = 242/264 (91%)
 Frame = +3

Query: 87  QGGFNFDLCRRNEMLMIKSGFKPPTYRKTGTTIVGLVFQDGIILGADTRATEGPIVADKN 266
           +GGF+FDLCRRN ML  K G K P +RKTGTTIVGLVFQDG++LGADTRATEGPIVADKN
Sbjct: 10  KGGFSFDLCRRNAMLE-KKGLKVPGFRKTGTTIVGLVFQDGVVLGADTRATEGPIVADKN 68

Query: 267 CEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRQATGRDSRVVTALTLLKTHLFGY 446
           CEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQL LHR AT R+SRVVTALTLLKTHLF Y
Sbjct: 69  CEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLHLHRYATSRESRVVTALTLLKTHLFNY 128

Query: 447 QGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPYATMGSGSLAAMAMFESNYKEGLSRDE 626
           QGHVSAALVLGGVD+TGPHLHT+YPHGSTDTLP+ATMGSGSLAAM++FES YKEGL+R+E
Sbjct: 129 QGHVSAALVLGGVDVTGPHLHTVYPHGSTDTLPFATMGSGSLAAMSVFESKYKEGLTREE 188

Query: 627 GIKLVCQAICAGIFNDLGSGSNVDVCVITKGKTDYLRNYQLPNPRTYVSSKGYSFARGQT 806
           GI+LV +AICAGIFNDLGSGSNVDVCVITKGKT+YLRN+QLPNPRTY SSKGYSF +G T
Sbjct: 189 GIQLVAEAICAGIFNDLGSGSNVDVCVITKGKTEYLRNHQLPNPRTYASSKGYSFTKGHT 248

Query: 807 EVLSTRIIPLMANLVLAEGDEMEE 878
           EVLST+IIPL     +AEGD MEE
Sbjct: 249 EVLSTKIIPLKQKAEVAEGDAMEE 272


>ref|XP_002461734.1| hypothetical protein SORBIDRAFT_02g007210 [Sorghum bicolor]
           gi|241925111|gb|EER98255.1| hypothetical protein
           SORBIDRAFT_02g007210 [Sorghum bicolor]
          Length = 273

 Score =  449 bits (1156), Expect = e-124
 Identities = 221/265 (83%), Positives = 244/265 (92%), Gaps = 1/265 (0%)
 Frame = +3

Query: 87  QGGFNFDLCRRNEMLMIKSGFKPPTYRKTGTTIVGLVFQDGIILGADTRATEGPIVADKN 266
           +GGF+FDLCRRN ML  K+G K P +RKTGTTIVGLVFQDG++LGADTRATEGPIVADKN
Sbjct: 10  KGGFSFDLCRRNNMLE-KNGLKLPGFRKTGTTIVGLVFQDGVVLGADTRATEGPIVADKN 68

Query: 267 CEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRQATGRDSRVVTALTLLKTHLFGY 446
           CEKIH+MAPNIYCCGAGTAADTEAVTDMVSSQLQLHR ATGR+SRVVTALTLLK+HLF Y
Sbjct: 69  CEKIHFMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYATGRESRVVTALTLLKSHLFRY 128

Query: 447 QGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPYATMGSGSLAAMAMFESNYKEGLSRDE 626
           QGHVSAALVLGGVD TGPHLHT+YPHGSTDTLP+ATMGSGSLAAM++FES YKEGL+R+E
Sbjct: 129 QGHVSAALVLGGVDCTGPHLHTVYPHGSTDTLPFATMGSGSLAAMSVFESKYKEGLTREE 188

Query: 627 GIKLVCQAICAGIFNDLGSGSNVDVCVITKGKTDYLRNYQLPNPRTYVSSKGYSFARGQT 806
           GI+LV  AICAGIFNDLGSGSNVDVCVITKGKT+YLRN+QLPNPRTY SSKGYSF++GQT
Sbjct: 189 GIQLVSDAICAGIFNDLGSGSNVDVCVITKGKTEYLRNHQLPNPRTYASSKGYSFSKGQT 248

Query: 807 EVLSTRIIPLMANLVLAE-GDEMEE 878
           EVLST+I PL   + + E GD MEE
Sbjct: 249 EVLSTKITPLKQKVEVTEGGDAMEE 273


>ref|NP_001149857.1| LOC100283485 [Zea mays] gi|194702548|gb|ACF85358.1| unknown [Zea
           mays] gi|195612088|gb|ACG27874.1| proteasome subunit
           beta type 7-A precursor [Zea mays]
           gi|195635121|gb|ACG37029.1| proteasome subunit beta type
           7-A precursor [Zea mays] gi|413942586|gb|AFW75235.1|
           proteasome subunit beta type isoform 1 [Zea mays]
           gi|413942587|gb|AFW75236.1| proteasome subunit beta type
           isoform 2 [Zea mays] gi|413942588|gb|AFW75237.1|
           proteasome subunit beta type isoform 3 [Zea mays]
          Length = 273

 Score =  449 bits (1155), Expect = e-124
 Identities = 219/265 (82%), Positives = 245/265 (92%), Gaps = 1/265 (0%)
 Frame = +3

Query: 87  QGGFNFDLCRRNEMLMIKSGFKPPTYRKTGTTIVGLVFQDGIILGADTRATEGPIVADKN 266
           +GGF+FDLCRRN ML  K+G K P +RKTGTTIVGLVFQDG++LGADTRATEGPIVADKN
Sbjct: 10  KGGFSFDLCRRNNMLE-KNGLKVPGFRKTGTTIVGLVFQDGVVLGADTRATEGPIVADKN 68

Query: 267 CEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRQATGRDSRVVTALTLLKTHLFGY 446
           CEKIH+MAPNIYCCGAGTAADTEAVTDMVSSQLQLHR ATGR+SRVVTALTLLK+HLF Y
Sbjct: 69  CEKIHFMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYATGRESRVVTALTLLKSHLFKY 128

Query: 447 QGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPYATMGSGSLAAMAMFESNYKEGLSRDE 626
           QGHVSAALVLGGVD TGPHLHT+YPHGSTDTLP+ATMGSGSLAAM++FES YKEGL+R+E
Sbjct: 129 QGHVSAALVLGGVDCTGPHLHTVYPHGSTDTLPFATMGSGSLAAMSVFESKYKEGLTREE 188

Query: 627 GIKLVCQAICAGIFNDLGSGSNVDVCVITKGKTDYLRNYQLPNPRTYVSSKGYSFARGQT 806
           GI++VC+AICAGIFNDLGSGSNVDVCVITKGKT+YLRN+QLPNPRTY SSKGYSF +GQT
Sbjct: 189 GIQIVCEAICAGIFNDLGSGSNVDVCVITKGKTEYLRNHQLPNPRTYASSKGYSFTKGQT 248

Query: 807 EVLSTRIIPLMANLVLAE-GDEMEE 878
           EVLS+++  L   + +AE GD MEE
Sbjct: 249 EVLSSKVTLLKQKVEVAEGGDAMEE 273


>gb|ACG40493.1| proteasome subunit beta type 7-A precursor [Zea mays]
          Length = 273

 Score =  447 bits (1151), Expect = e-123
 Identities = 218/265 (82%), Positives = 245/265 (92%), Gaps = 1/265 (0%)
 Frame = +3

Query: 87  QGGFNFDLCRRNEMLMIKSGFKPPTYRKTGTTIVGLVFQDGIILGADTRATEGPIVADKN 266
           +GGF+FDLCRRN ML  K+G K P +RKTGTTIVGLVFQDG++LGADTRATEGPIVADKN
Sbjct: 10  KGGFSFDLCRRNNMLE-KNGLKVPGFRKTGTTIVGLVFQDGVVLGADTRATEGPIVADKN 68

Query: 267 CEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRQATGRDSRVVTALTLLKTHLFGY 446
           CEKIH+MAPNIYCCGAGTAADTEAVTDMVSSQLQLHR ATGR+SRVVTALTLLK+HLF Y
Sbjct: 69  CEKIHFMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYATGRESRVVTALTLLKSHLFKY 128

Query: 447 QGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPYATMGSGSLAAMAMFESNYKEGLSRDE 626
           QGHVSAALVLGGVD TGPHLHT+YPHGSTDTLP+ATMGSGSLAAM++FES YKEGL+R+E
Sbjct: 129 QGHVSAALVLGGVDCTGPHLHTVYPHGSTDTLPFATMGSGSLAAMSVFESKYKEGLTREE 188

Query: 627 GIKLVCQAICAGIFNDLGSGSNVDVCVITKGKTDYLRNYQLPNPRTYVSSKGYSFARGQT 806
           GI++VC+AICAGIFNDLGSGSNVDVCVITKGKT+YLRN+QLPNPRTY SSKGYSF +GQT
Sbjct: 189 GIQIVCEAICAGIFNDLGSGSNVDVCVITKGKTEYLRNHQLPNPRTYASSKGYSFTKGQT 248

Query: 807 EVLSTRIIPLMANLVLAE-GDEMEE 878
           EVLS+++  L   + +AE GD +EE
Sbjct: 249 EVLSSKVTLLKQKVEVAEGGDAIEE 273