BLASTX nr result

ID: Coptis23_contig00003461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003461
         (938 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268619.2| PREDICTED: uncharacterized protein LOC100245...   187   2e-45
emb|CAN80815.1| hypothetical protein VITISV_020466 [Vitis vinifera]   186   5e-45
ref|XP_004134868.1| PREDICTED: uncharacterized protein LOC101203...   169   1e-39
ref|XP_002327759.1| predicted protein [Populus trichocarpa] gi|2...   169   1e-39
ref|XP_003520259.1| PREDICTED: uncharacterized protein LOC100784...   167   3e-39

>ref|XP_002268619.2| PREDICTED: uncharacterized protein LOC100245437 [Vitis vinifera]
           gi|297735022|emb|CBI17384.3| unnamed protein product
           [Vitis vinifera]
          Length = 325

 Score =  187 bits (476), Expect = 2e-45
 Identities = 94/181 (51%), Positives = 111/181 (61%), Gaps = 2/181 (1%)
 Frame = -2

Query: 892 NNTNSLA-IPSGWRTGDWICNCGFHNYSSRGECKKCNASLPSGTASSMVNTAITGMFPSH 716
           N+ N L  +P GWR GDWICNCGFHNYSSR +CKKCNAS+P                P+ 
Sbjct: 158 NHANQLLMVPKGWRNGDWICNCGFHNYSSRAQCKKCNASMP----------------PAL 201

Query: 715 GTKRLASEEFCGEWENKRLNAGDINNHFLTNQQPSYQGYEHIGRPGNDQTSGPY-PYRNG 539
           G KRLASEEF  +W++KRLNAG  N      QQPSY G+E +     D     Y PY + 
Sbjct: 202 GMKRLASEEFVRDWDSKRLNAGHANG-----QQPSYPGFEQLAGSSVDPKGVAYAPYPSV 256

Query: 538 SSITPWNSXXXXXXXXXXXXXXXXGKGAKQWRDGDWMCTNCSNHNYASRSQCNRCKTEKD 359
           + + P N                 GKGAKQWRDGDWMCTNC+NHN+ASRSQCNRCKT++D
Sbjct: 257 TPVAPPNLQVPMQFPHQTTTPTLLGKGAKQWRDGDWMCTNCNNHNFASRSQCNRCKTQRD 316

Query: 358 A 356
           A
Sbjct: 317 A 317


>emb|CAN80815.1| hypothetical protein VITISV_020466 [Vitis vinifera]
          Length = 849

 Score =  186 bits (473), Expect = 5e-45
 Identities = 94/181 (51%), Positives = 111/181 (61%), Gaps = 3/181 (1%)
 Frame = -2

Query: 892 NNTNSLA-IPSGWRTGDWICNCGFHNYSSRGECKKCNASLPSGTASSMVNTAITGMFPSH 716
           N+ N L  +P GWR GDWICNCGFHNYSSR +CKKCNAS+P                P+ 
Sbjct: 51  NHANQLLMVPKGWRNGDWICNCGFHNYSSRAQCKKCNASMP----------------PAL 94

Query: 715 GTKRLASEEFCGEWENKRLNAGDINNHFLTN-QQPSYQGYEHIGRPGNDQTSGPY-PYRN 542
           G KRLASEEF  +W++KRLNAG + +HFL N QQPSY G+E +     D     Y PY +
Sbjct: 95  GMKRLASEEFVRDWDSKRLNAGHVKDHFLANGQQPSYPGFEQLAGSSVDPKGVAYAPYPS 154

Query: 541 GSSITPWNSXXXXXXXXXXXXXXXXGKGAKQWRDGDWMCTNCSNHNYASRSQCNRCKTEK 362
            + + P N                 GKGAKQWRDGDWMCTNC+NHN+ASRSQCNR K   
Sbjct: 155 VTPVAPPNLQVPMQFPHQTTTPTLLGKGAKQWRDGDWMCTNCNNHNFASRSQCNRPKDGG 214

Query: 361 D 359
           D
Sbjct: 215 D 215


>ref|XP_004134868.1| PREDICTED: uncharacterized protein LOC101203537 [Cucumis sativus]
           gi|449525888|ref|XP_004169948.1| PREDICTED:
           uncharacterized protein LOC101224503 [Cucumis sativus]
          Length = 340

 Score =  169 bits (427), Expect = 1e-39
 Identities = 87/175 (49%), Positives = 102/175 (58%), Gaps = 1/175 (0%)
 Frame = -2

Query: 877 LAIPSGWRTGDWICNCGFHNYSSRGECKKCNASLPSGTASSMVNTAITGMFPSHGTKRLA 698
           L++P GWR GDW+CNCGFHNYSSR +CKKCNAS P                   G KRLA
Sbjct: 180 LSVPKGWRNGDWLCNCGFHNYSSRAQCKKCNAS-PQAL----------------GMKRLA 222

Query: 697 SEEFCGEWENKRLNAGDINNHFLTNQQPSYQGYEHIGRPGNDQTSGPY-PYRNGSSITPW 521
           SEE   +W+NKRLN G  N      QQ SY G+E +   G+D   G Y  Y + SS    
Sbjct: 223 SEELVHQWDNKRLNIGQANE-----QQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAP 277

Query: 520 NSXXXXXXXXXXXXXXXXGKGAKQWRDGDWMCTNCSNHNYASRSQCNRCKTEKDA 356
           N                 GKGAKQWR+GDWMCTNC+NHNYASR  CNRCKT++D+
Sbjct: 278 NLEMPMQFPPQATAPTLLGKGAKQWRNGDWMCTNCNNHNYASRLHCNRCKTQRDS 332


>ref|XP_002327759.1| predicted protein [Populus trichocarpa] gi|222836844|gb|EEE75237.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score =  169 bits (427), Expect = 1e-39
 Identities = 87/173 (50%), Positives = 103/173 (59%), Gaps = 2/173 (1%)
 Frame = -2

Query: 871 IPSGWRTGDWICNCGFHNYSSRGECKKCNASLPSGTASSMVNTAITGMFPSHGTKRLASE 692
           IP GWR GDW+CNCGFHNYSSR +CKKCNASLP                   GTKRLAS+
Sbjct: 167 IPKGWRNGDWLCNCGFHNYSSRAQCKKCNASLPPV-----------------GTKRLASQ 209

Query: 691 EFCGEWENKRLNAGDINNHFLTNQQPS-YQGYEHIGRPGNDQTSGPY-PYRNGSSITPWN 518
           EF  +WENKRLN+G+      T+ QP  Y  +  +     DQ+SG Y  Y   S+    N
Sbjct: 210 EFFQDWENKRLNSGN------TDGQPQPYPSFNQMAGTNGDQSSGVYVSYPTYSTELAPN 263

Query: 517 SXXXXXXXXXXXXXXXXGKGAKQWRDGDWMCTNCSNHNYASRSQCNRCKTEKD 359
                            GKGAKQWR+GDWMC NC+NHNYASR+QCNRCKT++D
Sbjct: 264 WQAPVQIPLQITTPALLGKGAKQWRNGDWMCANCNNHNYASRAQCNRCKTQRD 316



 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 52/174 (29%), Positives = 68/174 (39%), Gaps = 13/174 (7%)
 Frame = -2

Query: 856 RTGDWICN-CGFHNYSSRGECKKCNASLPSGTASSMVNTAITGMFPSHGTKRLASEEFCG 680
           R GDWIC  C  +NY+SR +CKKC          ++    ++    SH   R        
Sbjct: 48  RIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAMPGVSLPTYSHYFARSPG----- 102

Query: 679 EWENKRLNAGDINNHFLTNQQPSYQGYEHIGRP------------GNDQTSGPYPYRNGS 536
              ++RLN G   N  L    P    +   G              G  Q SG +PY N  
Sbjct: 103 -GPDQRLNIGLEGNGALQQPVPLNSSWSGGGADNYGVQQTSTWPLGGKQMSG-HPYAN-- 158

Query: 535 SITPWNSXXXXXXXXXXXXXXXXGKGAKQWRDGDWMCTNCSNHNYASRSQCNRC 374
              P N                     K WR+GDW+C NC  HNY+SR+QC +C
Sbjct: 159 ---PLNQPPPPI--------------PKGWRNGDWLC-NCGFHNYSSRAQCKKC 194


>ref|XP_003520259.1| PREDICTED: uncharacterized protein LOC100784874 [Glycine max]
          Length = 336

 Score =  167 bits (424), Expect = 3e-39
 Identities = 88/183 (48%), Positives = 108/183 (59%), Gaps = 2/183 (1%)
 Frame = -2

Query: 898 HINNTN-SLAIPSGWRTGDWICNCGFHNYSSRGECKKCNASLPSGTASSMVNTAITGMFP 722
           H N+TN +L++P GWR GDWICNCGFHNYSSR +CKKCNA                   P
Sbjct: 168 HENSTNHNLSVPKGWRNGDWICNCGFHNYSSRSQCKKCNA-----------------FPP 210

Query: 721 SHGTKRLASEEFCGEWENKRLNAGDINNHFLTNQQPSYQGYEHIGRPGNDQTSGPYP-YR 545
           + GTKRLASEE   +W+NKRLN G  N+     QQ +Y   + +   G D   G +P Y 
Sbjct: 211 ALGTKRLASEELVYDWDNKRLNVGTTND-----QQQTYTSLDLVVGTGADPKPGVFPSYP 265

Query: 544 NGSSITPWNSXXXXXXXXXXXXXXXXGKGAKQWRDGDWMCTNCSNHNYASRSQCNRCKTE 365
           + +S T  +                 GKGAKQWR GDWMC+NC+NHNYASR QCNRCKT+
Sbjct: 266 SMNSSTAPSLPLATLLPPQVSTPALIGKGAKQWRSGDWMCSNCNNHNYASRLQCNRCKTQ 325

Query: 364 KDA 356
           + A
Sbjct: 326 RMA 328


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