BLASTX nr result

ID: Coptis23_contig00003450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003450
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36916.1| unknown [Medicago truncatula]                           99   3e-19
ref|NP_001238240.1| uncharacterized protein LOC100499935 [Glycin...    99   5e-19
ref|XP_003534321.1| PREDICTED: 60S ribosomal protein L13-2 isofo...    97   1e-18
ref|XP_003522855.1| PREDICTED: 60S ribosomal protein L13-2-like ...    97   2e-18
gb|ACJ86119.1| unknown [Medicago truncatula]                           96   2e-18

>gb|AFK36916.1| unknown [Medicago truncatula]
          Length = 207

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/73 (67%), Positives = 57/73 (78%)
 Frame = -1

Query: 372 VFPRCAHKYKAGDSSPEEFAAATQVPSSYMRVVAETPTVGLVKPTEDIKAFKAYAKLRIE 193
           VFPR A K KAGDS+PEE A ATQV  SY+ +V E PTVGLVK T+++KAFKAY KLR+E
Sbjct: 125 VFPRRARKTKAGDSTPEELANATQVQGSYLPIVREKPTVGLVKVTDEMKAFKAYYKLRLE 184

Query: 192 MVNKKHFGARTKR 154
             NK+H GAR KR
Sbjct: 185 RTNKRHLGARLKR 197


>ref|NP_001238240.1| uncharacterized protein LOC100499935 [Glycine max]
           gi|255627819|gb|ACU14254.1| unknown [Glycine max]
          Length = 141

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/73 (64%), Positives = 58/73 (79%)
 Frame = -1

Query: 372 VFPRCAHKYKAGDSSPEEFAAATQVPSSYMRVVAETPTVGLVKPTEDIKAFKAYAKLRIE 193
           VFPR AHK KAGDS+PEE A ATQV  S++ +V E PTV LVK T+++KAFKAY KLR+E
Sbjct: 59  VFPRRAHKVKAGDSTPEELANATQVQGSFLPIVREKPTVDLVKVTDEMKAFKAYYKLRLE 118

Query: 192 MVNKKHFGARTKR 154
             NK+H+GAR K+
Sbjct: 119 RTNKRHYGARLKK 131


>ref|XP_003534321.1| PREDICTED: 60S ribosomal protein L13-2 isoform 1 [Glycine max]
           gi|356531513|ref|XP_003534322.1| PREDICTED: 60S
           ribosomal protein L13-2 isoform 2 [Glycine max]
          Length = 207

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/73 (64%), Positives = 57/73 (78%)
 Frame = -1

Query: 372 VFPRCAHKYKAGDSSPEEFAAATQVPSSYMRVVAETPTVGLVKPTEDIKAFKAYAKLRIE 193
           VFPR AHK KAGDS+PEE A ATQV  +++ +V E PTV LVK T+D+KAFKAY KLR+E
Sbjct: 125 VFPRRAHKVKAGDSTPEELANATQVQGAFLPIVREKPTVELVKVTDDMKAFKAYYKLRLE 184

Query: 192 MVNKKHFGARTKR 154
             NK+H GAR K+
Sbjct: 185 RTNKRHHGARLKK 197


>ref|XP_003522855.1| PREDICTED: 60S ribosomal protein L13-2-like [Glycine max]
          Length = 207

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/73 (64%), Positives = 57/73 (78%)
 Frame = -1

Query: 372 VFPRCAHKYKAGDSSPEEFAAATQVPSSYMRVVAETPTVGLVKPTEDIKAFKAYAKLRIE 193
           VFPR A K KAGDS+PEE A ATQV  S++ +V E PTV LVK T+D+KAFKAY KLR+E
Sbjct: 125 VFPRRAQKVKAGDSTPEELANATQVQGSFLPIVREKPTVELVKVTDDMKAFKAYYKLRLE 184

Query: 192 MVNKKHFGARTKR 154
             NK+H+GAR K+
Sbjct: 185 RTNKRHYGARLKK 197


>gb|ACJ86119.1| unknown [Medicago truncatula]
          Length = 207

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 48/73 (65%), Positives = 56/73 (76%)
 Frame = -1

Query: 372 VFPRCAHKYKAGDSSPEEFAAATQVPSSYMRVVAETPTVGLVKPTEDIKAFKAYAKLRIE 193
           VFPR A K KAGDS+PEE A ATQV  SY+ +V E PTV LVK T+++KAFKAY KLR+E
Sbjct: 125 VFPRRARKTKAGDSTPEELANATQVQGSYLPIVREKPTVELVKVTDEMKAFKAYYKLRLE 184

Query: 192 MVNKKHFGARTKR 154
             NK+H GAR KR
Sbjct: 185 RTNKRHLGARLKR 197


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