BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003449
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001056613.1| Os06g0115500 [Oryza sativa Japonica Group] g...    41   1e-06
ref|NP_001148638.1| 60S ribosomal protein L13-2 [Zea mays] gi|19...    40   3e-06
gb|AFW84113.1| hypothetical protein ZEAMMB73_641905 [Zea mays]         40   4e-06
dbj|BAB71993.1| BBC1-like protein [Oryza sativa Japonica Group]        42   4e-06
ref|NP_001050537.1| Os03g0576700 [Oryza sativa Japonica Group] g...    42   5e-06

>ref|NP_001056613.1| Os06g0115500 [Oryza sativa Japonica Group]
           gi|7248415|dbj|BAA92738.1| putative 60S ribosomal
           protein L13E [Oryza sativa Japonica Group]
           gi|24413953|dbj|BAC22205.1| putative 60S ribosomal
           protein L13E [Oryza sativa Japonica Group]
           gi|113594653|dbj|BAF18527.1| Os06g0115500 [Oryza sativa
           Japonica Group] gi|125553806|gb|EAY99411.1| hypothetical
           protein OsI_21382 [Oryza sativa Indica Group]
           gi|125595832|gb|EAZ35612.1| hypothetical protein
           OsJ_19902 [Oryza sativa Japonica Group]
           gi|149391053|gb|ABR25544.1| 60S ribosomal protein l13-2
           [Oryza sativa Indica Group] gi|215678596|dbj|BAG92251.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 208

 Score = 41.2 bits (95), Expect(2) = 1e-06
 Identities = 18/26 (69%), Positives = 23/26 (88%)
 Frame = -3

Query: 297 LVKPTEEMKACKAYAKLRTERMNKKH 220
           +VK T++MKA KAYAKLR ERMN++H
Sbjct: 166 VVKVTDDMKAFKAYAKLRVERMNQRH 191



 Score = 35.8 bits (81), Expect(2) = 1e-06
 Identities = 19/39 (48%), Positives = 26/39 (66%)
 Frame = -1

Query: 473 LQARDSIPDELASVTNVQRYMRMGIMGEKRTVELVKPTE 357
           ++A DS P+ELA+ T VQ        GEKR+VE+VK T+
Sbjct: 133 VKAGDSTPEELATATQVQGDYMPITRGEKRSVEVVKVTD 171


>ref|NP_001148638.1| 60S ribosomal protein L13-2 [Zea mays] gi|195621010|gb|ACG32335.1|
           60S ribosomal protein L13-2 [Zea mays]
           gi|195627958|gb|ACG35809.1| 60S ribosomal protein L13-2
           [Zea mays] gi|195657485|gb|ACG48210.1| 60S ribosomal
           protein L13-2 [Zea mays] gi|413951463|gb|AFW84112.1| 60S
           ribosomal protein L13 [Zea mays]
          Length = 208

 Score = 39.7 bits (91), Expect(2) = 3e-06
 Identities = 18/26 (69%), Positives = 21/26 (80%)
 Frame = -3

Query: 297 LVKPTEEMKACKAYAKLRTERMNKKH 220
           +VK T+EMK+  AY KLR ERMNKKH
Sbjct: 166 VVKVTDEMKSFAAYGKLRLERMNKKH 191



 Score = 36.2 bits (82), Expect(2) = 3e-06
 Identities = 19/39 (48%), Positives = 26/39 (66%)
 Frame = -1

Query: 473 LQARDSIPDELASVTNVQRYMRMGIMGEKRTVELVKPTE 357
           ++A DS P+ELA+ T VQ        GEKR+VE+VK T+
Sbjct: 133 VKAGDSTPEELATATQVQGDYMPFTRGEKRSVEVVKVTD 171


>gb|AFW84113.1| hypothetical protein ZEAMMB73_641905 [Zea mays]
          Length = 206

 Score = 39.7 bits (91), Expect(2) = 4e-06
 Identities = 18/26 (69%), Positives = 21/26 (80%)
 Frame = -3

Query: 297 LVKPTEEMKACKAYAKLRTERMNKKH 220
           +VK T+EMK+  AY KLR ERMNKKH
Sbjct: 164 VVKVTDEMKSFAAYGKLRLERMNKKH 189



 Score = 35.8 bits (81), Expect(2) = 4e-06
 Identities = 19/38 (50%), Positives = 25/38 (65%)
 Frame = -1

Query: 470 QARDSIPDELASVTNVQRYMRMGIMGEKRTVELVKPTE 357
           +A DS P+ELA+ T VQ        GEKR+VE+VK T+
Sbjct: 132 KAGDSTPEELATATQVQGDYMPFTRGEKRSVEVVKVTD 169


>dbj|BAB71993.1| BBC1-like protein [Oryza sativa Japonica Group]
          Length = 142

 Score = 42.4 bits (98), Expect(2) = 4e-06
 Identities = 19/26 (73%), Positives = 23/26 (88%)
 Frame = -3

Query: 297 LVKPTEEMKACKAYAKLRTERMNKKH 220
           +VK T+EMKA KAYAKLR ERMN++H
Sbjct: 100 VVKVTDEMKAFKAYAKLRVERMNQRH 125



 Score = 33.1 bits (74), Expect(2) = 4e-06
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = -1

Query: 473 LQARDSIPDELASVTNVQRYMRMGIMGEKRTVELVKPTE 357
           ++A DS  +ELA+ T VQ        GEKR+VE+VK T+
Sbjct: 67  VKAXDSTAEELATATQVQGDYMPIARGEKRSVEVVKVTD 105


>ref|NP_001050537.1| Os03g0576700 [Oryza sativa Japonica Group]
           gi|18873677|emb|CAC81268.1| putative cold-induced
           protein [Oryza sativa Indica Group]
           gi|32493112|gb|AAP85547.1| ribosomal protein large
           subunit 13 [Oryza sativa Japonica Group]
           gi|38093740|gb|AAR10856.1| putative 60S ribosomal
           protein [Oryza sativa Japonica Group]
           gi|108709459|gb|ABF97254.1| 60S ribosomal protein L13-2,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113549008|dbj|BAF12451.1| Os03g0576700 [Oryza sativa
           Japonica Group] gi|125544606|gb|EAY90745.1| hypothetical
           protein OsI_12345 [Oryza sativa Indica Group]
           gi|125586909|gb|EAZ27573.1| hypothetical protein
           OsJ_11521 [Oryza sativa Japonica Group]
           gi|215687345|dbj|BAG91910.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215737421|dbj|BAG96551.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740859|dbj|BAG97015.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 208

 Score = 42.4 bits (98), Expect(2) = 5e-06
 Identities = 19/26 (73%), Positives = 23/26 (88%)
 Frame = -3

Query: 297 LVKPTEEMKACKAYAKLRTERMNKKH 220
           +VK T+EMKA KAYAKLR ERMN++H
Sbjct: 166 VVKVTDEMKAFKAYAKLRVERMNQRH 191



 Score = 32.7 bits (73), Expect(2) = 5e-06
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = -1

Query: 473 LQARDSIPDELASVTNVQRYMRMGIMGEKRTVELVKPTE 357
           ++A DS  +ELA+ T VQ        GEKR+VE+VK T+
Sbjct: 133 VKAGDSTAEELATATQVQGDYMPIARGEKRSVEVVKVTD 171