BLASTX nr result

ID: Coptis23_contig00003443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003443
         (2027 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243...   123   2e-25
emb|CBI36980.3| unnamed protein product [Vitis vinifera]              123   2e-25
emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]   123   2e-25
ref|XP_002302785.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-24
ref|XP_002320283.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-23

>ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243428 [Vitis vinifera]
          Length = 1214

 Score =  123 bits (308), Expect = 2e-25
 Identities = 65/142 (45%), Positives = 94/142 (66%)
 Frame = -1

Query: 731  TGNQCYKAIEDVEKETVPQAFLVDHRSDEVTFENGSLPFTKSHPLWGNVESMEVFRLMPQ 552
            T NQ  +A E      V Q+  +D   + +   N SLPF KS P+W  +E++EVF+ MPQ
Sbjct: 993  TVNQWNEARE--RPSEVTQSPRIDPTGEIMLDLNQSLPFVKSSPIWNTLETLEVFQRMPQ 1050

Query: 551  HPHFRPLQQLNELLREGQALGYMLTFANVIDKVSKAQLDEPYSTFENELEALIELETNGF 372
             PHFRPL+   E  REG A+G M+TF+ +I+KV+K + D+P S F + LEAL+ELE +GF
Sbjct: 1051 KPHFRPLENCKEERREGLAIGNMVTFSTLIEKVAKLRFDDPRSIFGSSLEALVELEMHGF 1110

Query: 371  NVHPVRARIKKLLRIKDTRARL 306
            +  PV++RI +L+ IKD + +L
Sbjct: 1111 DTKPVQSRINELVFIKDQQEQL 1132


>emb|CBI36980.3| unnamed protein product [Vitis vinifera]
          Length = 1074

 Score =  123 bits (308), Expect = 2e-25
 Identities = 65/142 (45%), Positives = 94/142 (66%)
 Frame = -1

Query: 731  TGNQCYKAIEDVEKETVPQAFLVDHRSDEVTFENGSLPFTKSHPLWGNVESMEVFRLMPQ 552
            T NQ  +A E      V Q+  +D   + +   N SLPF KS P+W  +E++EVF+ MPQ
Sbjct: 853  TVNQWNEARE--RPSEVTQSPRIDPTGEIMLDLNQSLPFVKSSPIWNTLETLEVFQRMPQ 910

Query: 551  HPHFRPLQQLNELLREGQALGYMLTFANVIDKVSKAQLDEPYSTFENELEALIELETNGF 372
             PHFRPL+   E  REG A+G M+TF+ +I+KV+K + D+P S F + LEAL+ELE +GF
Sbjct: 911  KPHFRPLENCKEERREGLAIGNMVTFSTLIEKVAKLRFDDPRSIFGSSLEALVELEMHGF 970

Query: 371  NVHPVRARIKKLLRIKDTRARL 306
            +  PV++RI +L+ IKD + +L
Sbjct: 971  DTKPVQSRINELVFIKDQQEQL 992


>emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]
          Length = 1348

 Score =  123 bits (308), Expect = 2e-25
 Identities = 65/142 (45%), Positives = 94/142 (66%)
 Frame = -1

Query: 731  TGNQCYKAIEDVEKETVPQAFLVDHRSDEVTFENGSLPFTKSHPLWGNVESMEVFRLMPQ 552
            T NQ  +A E      V Q+  +D   + +   N SLPF KS P+W  +E++EVF+ MPQ
Sbjct: 975  TVNQWNEARE--RPSEVTQSPRIDPTGEIMLDLNQSLPFVKSSPIWNTLETLEVFQRMPQ 1032

Query: 551  HPHFRPLQQLNELLREGQALGYMLTFANVIDKVSKAQLDEPYSTFENELEALIELETNGF 372
             PHFRPL+   E  REG A+G M+TF+ +I+KV+K + D+P S F + LEAL+ELE +GF
Sbjct: 1033 KPHFRPLENCKEERREGLAIGNMVTFSTLIEKVAKLRFDDPRSIFGSSLEALVELEMHGF 1092

Query: 371  NVHPVRARIKKLLRIKDTRARL 306
            +  PV++RI +L+ IKD + +L
Sbjct: 1093 DTKPVQSRINELVFIKDQQEQL 1114


>ref|XP_002302785.1| predicted protein [Populus trichocarpa] gi|222844511|gb|EEE82058.1|
            predicted protein [Populus trichocarpa]
          Length = 919

 Score =  120 bits (300), Expect = 2e-24
 Identities = 61/146 (41%), Positives = 91/146 (62%), Gaps = 1/146 (0%)
 Frame = -1

Query: 731  TGNQCYKAIEDVEKETVP-QAFLVDHRSDEVTFENGSLPFTKSHPLWGNVESMEVFRLMP 555
            TG       E  EK+ V  Q+  VD +S++   EN  +PF K  P+W  +ESMEVF+++P
Sbjct: 692  TGRIASGVSEAREKKVVAVQSCTVDPKSNDTMVENQLVPFVKKSPVWNTIESMEVFQIIP 751

Query: 554  QHPHFRPLQQLNELLREGQALGYMLTFANVIDKVSKAQLDEPYSTFENELEALIELETNG 375
            Q PHF PL +  E  REG A+G M+TFA++ +K+S  Q D+  S  E+ LE+L++LE +G
Sbjct: 752  QKPHFHPLTECKEEYREGSAIGIMVTFASLFEKISSLQFDDCRSILESTLESLVDLEKHG 811

Query: 374  FNVHPVRARIKKLLRIKDTRARLHEE 297
            F++   R R+ +LL IKD +  +  E
Sbjct: 812  FDITVPRCRLNELLSIKDGQGEVINE 837


>ref|XP_002320283.1| predicted protein [Populus trichocarpa] gi|222861056|gb|EEE98598.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  117 bits (293), Expect = 1e-23
 Identities = 60/151 (39%), Positives = 91/151 (60%), Gaps = 1/151 (0%)
 Frame = -1

Query: 746 EGHTDTGNQCYKAIEDVEKETVP-QAFLVDHRSDEVTFENGSLPFTKSHPLWGNVESMEV 570
           E  + TG       E  EK+ V  ++  +D + ++   EN S+PF K  P+W  +ESMEV
Sbjct: 38  ELRSSTGRAASGGSEAREKQAVAVESCTIDAKGNDTLVENQSVPFVKRSPVWNTIESMEV 97

Query: 569 FRLMPQHPHFRPLQQLNELLREGQALGYMLTFANVIDKVSKAQLDEPYSTFENELEALIE 390
           FR +PQ  HF PL +  E  REG A+G M+TFA++ DK++  Q D+  S  E+ LE+L++
Sbjct: 98  FRAIPQKLHFHPLTECKEEYREGSAIGIMVTFASLFDKITSLQFDDCRSILESTLESLLD 157

Query: 389 LETNGFNVHPVRARIKKLLRIKDTRARLHEE 297
           LE +GF++   R R+ +LL IKD +  +  E
Sbjct: 158 LEKHGFDITVPRGRLNELLSIKDGQGEVLNE 188


Top