BLASTX nr result
ID: Coptis23_contig00003431
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00003431
(3450 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272410.1| PREDICTED: structural maintenance of chromos... 1414 0.0
ref|XP_004135946.1| PREDICTED: structural maintenance of chromos... 1369 0.0
ref|XP_004158182.1| PREDICTED: LOW QUALITY PROTEIN: structural m... 1362 0.0
ref|XP_002517770.1| structural maintenance of chromosomes 5 smc5... 1356 0.0
ref|NP_197096.1| structural maintenance of chromosomes 5 [Arabid... 1311 0.0
>ref|XP_002272410.1| PREDICTED: structural maintenance of chromosomes protein 5 [Vitis
vinifera] gi|297736324|emb|CBI24962.3| unnamed protein
product [Vitis vinifera]
Length = 1051
Score = 1414 bits (3659), Expect = 0.0
Identities = 705/1047 (67%), Positives = 856/1047 (81%)
Frame = +3
Query: 111 VSERSAKRAKLTKRGEDDYMPGNITEIELHNFMTFSQIKCKPGPRLNLVIGPNGSGKSSL 290
++ER +KR K+T RGEDDY+PGNITEIELHNFMTF+ +KCKPG RLNLVIGPNGSGKSSL
Sbjct: 1 MAERRSKRPKIT-RGEDDYLPGNITEIELHNFMTFNDLKCKPGSRLNLVIGPNGSGKSSL 59
Query: 291 VCAIALGLGGEPQLLGRATSVGAFVKRGEDAGFIRISLRGDTMGEQLTITRQIESKSNKS 470
VCAIALGLGG+PQLLGRA+S+GA+VKRGE++G+I+ISLRGDT EQ+TI R+I+++ NKS
Sbjct: 60 VCAIALGLGGDPQLLGRASSIGAYVKRGEESGYIKISLRGDTEEEQITIMRKIDTR-NKS 118
Query: 471 EWLFNGKSVPKKDVLEIIKRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPE 650
EWLFNGK VPKKDV+EI++RFNIQVNNLTQFLPQDRV EFAKLTPVQLLEETEKAVGDP+
Sbjct: 119 EWLFNGKVVPKKDVIEIVRRFNIQVNNLTQFLPQDRVSEFAKLTPVQLLEETEKAVGDPQ 178
Query: 651 LPVRHHALIEKSRELKRLELSVKQNGDTLNQLKALNAEQEKDVERVRQREQLLAKVESMR 830
LPV+H AL+ KSRELK+LE +V+QNG+ LN LK LN+E+EKDVERVRQR++LLAKVESM+
Sbjct: 179 LPVQHCALVLKSRELKKLEKAVEQNGEMLNCLKTLNSEREKDVERVRQRQELLAKVESMK 238
Query: 831 KKLPWLKYDKVKVDFLQAKEAEKDAEGKMNESINILNDLNLPVEKQKKLREVQDIALKNV 1010
KKLPWLKYD KV +++AKE E DA+ K++E+ LND+ P+EKQ++ + D K V
Sbjct: 239 KKLPWLKYDMQKVRYMEAKEQENDAKKKLDEAAKTLNDIREPIEKQRQEKAALDAKCKKV 298
Query: 1011 SKLIAKNNAKRMERLENESRLGVQVVGSYKEMDELRRQEESRQHRILRAKEDXXXXXXXX 1190
S L+ N+ +RME LE E+RLGVQ G Y EM+ELRRQEESRQ RI +AKED
Sbjct: 299 SGLMNGNSKRRMELLEKENRLGVQARGKYNEMEELRRQEESRQQRISKAKEDLVAAELEL 358
Query: 1191 XXXPIFEPPKSEIDNLAAQIRELDFXXXXXXXXXXXXXXVLNQKKTTLWQCKERLADMES 1370
P +E PK EI+ L +QI EL+F +L QKK L QC +RL DME+
Sbjct: 359 ASLPPYEHPKDEIERLGSQILELEFSASQKRLVKSEKEKLLGQKKGALRQCVDRLKDMEN 418
Query: 1371 IHTKLLEALKRNGAEYIFEAYRWVQEHRNEFNKEVFGPVLLEVKIPNREHAAYVENHVSF 1550
+ KLL+AL+ +GAE IFEAY W+QEHR+E NK+V+GPVLLEV + +R HA Y+E H+ +
Sbjct: 419 KNNKLLQALQNSGAEKIFEAYHWLQEHRHELNKDVYGPVLLEVNVSHRIHADYLEGHIPY 478
Query: 1551 YIWRSFITQDAADRDLLVKNLKLFDVAILNYVADRGNHKVPFEVSEEMQKVGIYSRLDQV 1730
YIW+SFITQD DRD LVKNL+LFDV +LNYV + HK PF++SEEM+K+GI SRLDQV
Sbjct: 479 YIWKSFITQDPDDRDFLVKNLRLFDVPVLNYVRNEDRHKEPFQISEEMRKLGISSRLDQV 538
Query: 1731 FDAPNAVKEVLTSQFMLDNSYIGSEETDRKADGVPELGIRDLWTPDNHYRWTTSRYGGHI 1910
FD+P+AVKEVLTSQF L++SYIGS ETD+KAD V +LGI D WTP+NHYRW+ SRYGGH+
Sbjct: 539 FDSPDAVKEVLTSQFALEHSYIGSRETDQKADEVSKLGILDFWTPENHYRWSVSRYGGHV 598
Query: 1911 SASVEPVSPSHLFLCSVDAGEIQKRRDRKEELEESISHLEGSIRFLQTEQRHYEDEAAKL 2090
SA VEPV+ S L +CS D GEI++ R +K+ELEE I LE + + LQ EQR EDEAAKL
Sbjct: 599 SAIVEPVARSRLLVCSTDTGEIERLRSKKKELEEIIDDLEENFKSLQIEQRLLEDEAAKL 658
Query: 2091 RKQREDISSNAQLEKKKRRDMESRVYQRKRKLESIENEDDMETNMKKLVDQVSRLNMQRL 2270
KQRE+I + QLEK+KRR+ME+RV QRKRKLES+E EDD++T M KL+DQ ++ N+QR
Sbjct: 659 HKQREEIINTVQLEKRKRREMENRVSQRKRKLESMEKEDDLDTVMAKLIDQAAKFNIQRY 718
Query: 2271 QNAIEIKNMLVEAVSLKRSSAEKHITCIELEAKISKLRQNLKDQEKLVKQASVHFEDCKQ 2450
Q IEIKN+L+E+VS KR+ AEKH+T IE +AKI +L +K QE+ QAS+HFE+CK+
Sbjct: 719 QCVIEIKNLLIESVSYKRTFAEKHMTSIEFDAKIRELEVGIKQQERFAMQASLHFENCKK 778
Query: 2451 STEHYKEKLAAAKRHAESIAKITPELSKEFLEMPGTIEELDAAIQDNTSQANSILFLNKN 2630
E ++++LAAAKRHAESIA ITP L K FLEMP TIE+L+AAIQD SQANSILFLN N
Sbjct: 779 EVEDHRQQLAAAKRHAESIAVITPVLEKAFLEMPATIEDLEAAIQDTISQANSILFLNHN 838
Query: 2631 VLEEYENRQRKIENFAEKLGAADTELKACLSEIDNLKQSWLLTLRNLVSHINDTFSRNFQ 2810
+LEEYE Q+KIE + KL A + EL+ L+EID LK++WL TLRNLV+ IN+TFSRNFQ
Sbjct: 839 ILEEYEECQQKIEAISTKLEADEKELRMYLAEIDALKENWLTTLRNLVAQINETFSRNFQ 898
Query: 2811 EMAVAGEVSLDEHEMDFDKFGILIKVKFRQAGELQVLSAHHQSGGERSVSTILYLVSLQD 2990
+MAVAGEVSLDEH++DFD+FGILIKVKFRQAGELQVLSAHHQSGGERSV+TILYLVSLQD
Sbjct: 899 DMAVAGEVSLDEHDIDFDQFGILIKVKFRQAGELQVLSAHHQSGGERSVATILYLVSLQD 958
Query: 2991 ITNCPFRVVDEINQGMDPINERNMFQQLVRAASQPNSPQCFLLTPKLLPNLVYGEACSIL 3170
+TNCPFRVVDEINQGMDPINER MFQQLVRAASQPN+PQCFLLTPKLLP+L Y EACSIL
Sbjct: 959 LTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSIL 1018
Query: 3171 TVMNGPWVESPSNAWKDGGRWGQIMGL 3251
+MNGPW+E PS W +G WG ++GL
Sbjct: 1019 NIMNGPWIEQPSKVWSNGDCWGTVVGL 1045
>ref|XP_004135946.1| PREDICTED: structural maintenance of chromosomes protein 5-like
[Cucumis sativus]
Length = 1053
Score = 1369 bits (3543), Expect = 0.0
Identities = 692/1044 (66%), Positives = 828/1044 (79%)
Frame = +3
Query: 114 SERSAKRAKLTKRGEDDYMPGNITEIELHNFMTFSQIKCKPGPRLNLVIGPNGSGKSSLV 293
SE AKR ++T RGEDDYMPG+I EIELHNFMTF+ +KCKPG RLNLVIGPNGSGKSS+V
Sbjct: 4 SEHRAKRLRIT-RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIV 62
Query: 294 CAIALGLGGEPQLLGRATSVGAFVKRGEDAGFIRISLRGDTMGEQLTITRQIESKSNKSE 473
CAIALGLGGEPQLLGRATSVGA+VKRGE++G++RI+LRG+T E++TITR++++ NKSE
Sbjct: 63 CAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKMDTH-NKSE 121
Query: 474 WLFNGKSVPKKDVLEIIKRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPEL 653
WLFNGK VPKKDV II+RFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDP+L
Sbjct: 122 WLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQL 181
Query: 654 PVRHHALIEKSRELKRLELSVKQNGDTLNQLKALNAEQEKDVERVRQREQLLAKVESMRK 833
P+ H AL++KS +K +E +V++NGDTL+QLKALN EQEKDVE VRQR++LL KVESM+K
Sbjct: 182 PILHRALVDKSHGIKSIERAVEKNGDTLDQLKALNVEQEKDVEHVRQRDELLKKVESMKK 241
Query: 834 KLPWLKYDKVKVDFLQAKEAEKDAEGKMNESINILNDLNLPVEKQKKLREVQDIALKNVS 1013
KLPWLKYD K ++L+ KE EK+A+ K++E+ N LNDL P+EKQK + D K S
Sbjct: 242 KLPWLKYDMKKAEYLEVKEKEKEAKKKLDEAANTLNDLKKPIEKQKLEKAKLDAKTKKYS 301
Query: 1014 KLIAKNNAKRMERLENESRLGVQVVGSYKEMDELRRQEESRQHRILRAKEDXXXXXXXXX 1193
I N+ KR+E E E+RLGVQV G KEM++LR+QEESRQ RI RAKE+
Sbjct: 302 TRINDNHKKRVELQETENRLGVQVQGKLKEMEDLRKQEESRQQRIARAKEELESAEFELQ 361
Query: 1194 XXPIFEPPKSEIDNLAAQIRELDFXXXXXXXXXXXXXXVLNQKKTTLWQCKERLADMESI 1373
P +E PK EI+ L AQI EL+ ++QK+ TL QC +RL DME+
Sbjct: 362 NLPAYEHPKDEIERLRAQILELEVSASQKRLMKSEIEKNISQKRNTLRQCSDRLKDMENT 421
Query: 1374 HTKLLEALKRNGAEYIFEAYRWVQEHRNEFNKEVFGPVLLEVKIPNREHAAYVENHVSFY 1553
+TKLL+ALK +G E IFEAY W+QEHR+EF KEV+GPVLLEV + NR HA Y+E H+ Y
Sbjct: 422 NTKLLQALKNSGTEKIFEAYHWLQEHRHEFKKEVYGPVLLEVNVSNRTHADYLEGHIPSY 481
Query: 1554 IWRSFITQDAADRDLLVKNLKLFDVAILNYVADRGNHKVPFEVSEEMQKVGIYSRLDQVF 1733
+W+SFITQD+ DRD++VKNL F V +LNYV FE+SEE++ GIYSRLDQ+F
Sbjct: 482 VWKSFITQDSHDRDIMVKNLGSFGVPVLNYVGGERRTNQHFELSEEVRAFGIYSRLDQIF 541
Query: 1734 DAPNAVKEVLTSQFMLDNSYIGSEETDRKADGVPELGIRDLWTPDNHYRWTTSRYGGHIS 1913
DAP AVKEVLT QF L++SYIGS+ TD+KAD V +LGI D WTPDNHYRW+ SRYGGHIS
Sbjct: 542 DAPAAVKEVLTMQFGLEHSYIGSKVTDQKADEVSKLGILDFWTPDNHYRWSRSRYGGHIS 601
Query: 1914 ASVEPVSPSHLFLCSVDAGEIQKRRDRKEELEESISHLEGSIRFLQTEQRHYEDEAAKLR 2093
SVEPV S L LC++DAGEI R RK ELEES+S LE + + Q E R EDE AKLR
Sbjct: 602 GSVEPVDRSRLLLCNLDAGEIDGLRSRKSELEESVSALEENCKSCQNELRLIEDEEAKLR 661
Query: 2094 KQREDISSNAQLEKKKRRDMESRVYQRKRKLESIENEDDMETNMKKLVDQVSRLNMQRLQ 2273
K REDI + Q EK+KRR+ME+R+ QRK+KLES+E EDD++T + KLVDQ + N+QR
Sbjct: 662 KHREDILNTVQHEKRKRREMENRIDQRKKKLESMEREDDLDTVVAKLVDQAANFNIQRFH 721
Query: 2274 NAIEIKNMLVEAVSLKRSSAEKHITCIELEAKISKLRQNLKDQEKLVKQASVHFEDCKQS 2453
AIEIKN+L+EAVS ++S + H++ IE+EAKI +L NLK EK+ QASV FE CK+
Sbjct: 722 CAIEIKNLLLEAVSYRQSLTKNHMSSIEIEAKIRELEVNLKQHEKVALQASVQFEYCKKE 781
Query: 2454 TEHYKEKLAAAKRHAESIAKITPELSKEFLEMPGTIEELDAAIQDNTSQANSILFLNKNV 2633
E Y ++L+AAK++AESIA ITPEL KEFLEMP TIEEL+AAIQDN SQANSILFLN NV
Sbjct: 782 VEDYLQQLSAAKKYAESIAAITPELEKEFLEMPTTIEELEAAIQDNISQANSILFLNHNV 841
Query: 2634 LEEYENRQRKIENFAEKLGAADTELKACLSEIDNLKQSWLLTLRNLVSHINDTFSRNFQE 2813
LEEYE+RQR+I A KL A EL+ C++E+D LK +WL TLR LVS IN+TFSRNFQE
Sbjct: 842 LEEYEHRQRQINIIARKLEADKHELRKCMAEVDELKGNWLPTLRKLVSQINETFSRNFQE 901
Query: 2814 MAVAGEVSLDEHEMDFDKFGILIKVKFRQAGELQVLSAHHQSGGERSVSTILYLVSLQDI 2993
MAVAGEV LDEH+MDFD+FGILIKVKFRQ+G+LQVLSAHHQSGGERSVSTILYLVSLQD+
Sbjct: 902 MAVAGEVLLDEHDMDFDQFGILIKVKFRQSGQLQVLSAHHQSGGERSVSTILYLVSLQDL 961
Query: 2994 TNCPFRVVDEINQGMDPINERNMFQQLVRAASQPNSPQCFLLTPKLLPNLVYGEACSILT 3173
TNCPFRVVDEINQGMDPINER MFQQLVRAASQ N+PQCFLLTPKLLP L Y EAC+IL
Sbjct: 962 TNCPFRVVDEINQGMDPINERKMFQQLVRAASQTNTPQCFLLTPKLLPELEYSEACTILN 1021
Query: 3174 VMNGPWVESPSNAWKDGGRWGQIM 3245
+MNGPW+E PS AW +G WG +M
Sbjct: 1022 IMNGPWIEQPSRAWSNGDSWGTLM 1045
>ref|XP_004158182.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of chromosomes
protein 5-like [Cucumis sativus]
Length = 1053
Score = 1362 bits (3525), Expect = 0.0
Identities = 688/1044 (65%), Positives = 826/1044 (79%)
Frame = +3
Query: 114 SERSAKRAKLTKRGEDDYMPGNITEIELHNFMTFSQIKCKPGPRLNLVIGPNGSGKSSLV 293
SE AKR ++T RGEDDYMPG+I EIELHNFMTF+ +KCKPG RLNLVIGPNGSGKSS+V
Sbjct: 4 SEHRAKRLRIT-RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIV 62
Query: 294 CAIALGLGGEPQLLGRATSVGAFVKRGEDAGFIRISLRGDTMGEQLTITRQIESKSNKSE 473
CAIALGLGGEPQLLGRATSVGA+VKRGE++G++RI+LRG+T E++TITR++++ NKSE
Sbjct: 63 CAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKMDTH-NKSE 121
Query: 474 WLFNGKSVPKKDVLEIIKRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPEL 653
WLFNGK VPKKDV II+RFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDP+L
Sbjct: 122 WLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQL 181
Query: 654 PVRHHALIEKSRELKRLELSVKQNGDTLNQLKALNAEQEKDVERVRQREQLLAKVESMRK 833
P+ H AL++KS +K +E +V++NGDTL+QLKALN EQEKDVE VRQR++LL KVESM+K
Sbjct: 182 PILHRALVDKSHGIKSIERAVEKNGDTLDQLKALNVEQEKDVEHVRQRDELLKKVESMKK 241
Query: 834 KLPWLKYDKVKVDFLQAKEAEKDAEGKMNESINILNDLNLPVEKQKKLREVQDIALKNVS 1013
KLPWLKYD K ++L+ KE EK+A+ K++E+ N LNDL P+EKQK + D K S
Sbjct: 242 KLPWLKYDMKKAEYLEVKEKEKEAKKKLDEAANTLNDLKKPIEKQKLEKAKLDAKTKKYS 301
Query: 1014 KLIAKNNAKRMERLENESRLGVQVVGSYKEMDELRRQEESRQHRILRAKEDXXXXXXXXX 1193
I N+ KR+E E E+RLGVQV G KEM++LR+QEESRQ RI RAKE+
Sbjct: 302 TRINDNHKKRVELQETENRLGVQVQGKLKEMEDLRKQEESRQQRITRAKEELESAEFELQ 361
Query: 1194 XXPIFEPPKSEIDNLAAQIRELDFXXXXXXXXXXXXXXVLNQKKTTLWQCKERLADMESI 1373
P +E PK EI+ L AQI EL+ ++QK+ TL QC +RL DME+
Sbjct: 362 NLPAYEHPKDEIERLRAQILELEVSASQKRLMKSEIEKNISQKRNTLRQCSDRLKDMENT 421
Query: 1374 HTKLLEALKRNGAEYIFEAYRWVQEHRNEFNKEVFGPVLLEVKIPNREHAAYVENHVSFY 1553
+TKLL+ALK +G E +AY W+QEHR+EF KEV+GPVLLEV + NR HA Y+E H+ Y
Sbjct: 422 NTKLLQALKNSGTEKXMQAYHWLQEHRHEFKKEVYGPVLLEVNVSNRTHADYLEGHIPSY 481
Query: 1554 IWRSFITQDAADRDLLVKNLKLFDVAILNYVADRGNHKVPFEVSEEMQKVGIYSRLDQVF 1733
+W+SFITQD+ DRD++VKNL F V +LNYV F++SEE++ GIYSRLDQ+F
Sbjct: 482 VWKSFITQDSHDRDIMVKNLGSFGVPVLNYVGGERRTNQHFKLSEEVRAFGIYSRLDQIF 541
Query: 1734 DAPNAVKEVLTSQFMLDNSYIGSEETDRKADGVPELGIRDLWTPDNHYRWTTSRYGGHIS 1913
DAP AVKEVLT QF L++SYIGS+ TD+KAD V +LGI D WTPDNHYRW+ SRYGGHIS
Sbjct: 542 DAPAAVKEVLTMQFGLEHSYIGSKVTDQKADEVSKLGILDFWTPDNHYRWSRSRYGGHIS 601
Query: 1914 ASVEPVSPSHLFLCSVDAGEIQKRRDRKEELEESISHLEGSIRFLQTEQRHYEDEAAKLR 2093
SVEPV S L LC++DAGEI R RK ELEES+S LE + + Q E R EDE AKLR
Sbjct: 602 GSVEPVDRSRLLLCNLDAGEIDGLRSRKSELEESVSALEENCKSCQNELRLIEDEEAKLR 661
Query: 2094 KQREDISSNAQLEKKKRRDMESRVYQRKRKLESIENEDDMETNMKKLVDQVSRLNMQRLQ 2273
K REDI + Q EK+KRR+ME+R+ QRK+KLES+E EDD++T + KLVDQ + N+QR
Sbjct: 662 KHREDILNTVQHEKRKRREMENRIDQRKKKLESMEREDDLDTVVAKLVDQAANFNIQRFH 721
Query: 2274 NAIEIKNMLVEAVSLKRSSAEKHITCIELEAKISKLRQNLKDQEKLVKQASVHFEDCKQS 2453
AIEIKN+L+EAVS ++S + H++ IE+EAKI +L NLK EK+ QASV FE CK+
Sbjct: 722 CAIEIKNLLLEAVSYRQSLTKNHMSSIEIEAKIRELEVNLKQHEKVALQASVQFEYCKKE 781
Query: 2454 TEHYKEKLAAAKRHAESIAKITPELSKEFLEMPGTIEELDAAIQDNTSQANSILFLNKNV 2633
E Y ++L+AAK++AESIA ITPEL KEFLEMP TIEEL+AAIQDN SQANSILFLN NV
Sbjct: 782 VEDYLQQLSAAKKYAESIAAITPELEKEFLEMPTTIEELEAAIQDNISQANSILFLNHNV 841
Query: 2634 LEEYENRQRKIENFAEKLGAADTELKACLSEIDNLKQSWLLTLRNLVSHINDTFSRNFQE 2813
LEEYE+RQR+I A KL A EL+ C++E+D LK +WL TLR LVS IN+TFSRNFQE
Sbjct: 842 LEEYEHRQRQINIIARKLEADKHELRKCMAEVDELKGNWLPTLRKLVSQINETFSRNFQE 901
Query: 2814 MAVAGEVSLDEHEMDFDKFGILIKVKFRQAGELQVLSAHHQSGGERSVSTILYLVSLQDI 2993
MAVAGEV LDEH+MDFD+FGILIKVKFRQ+G+LQVLSAHHQSGGERSVSTILYLVSLQD+
Sbjct: 902 MAVAGEVLLDEHDMDFDQFGILIKVKFRQSGQLQVLSAHHQSGGERSVSTILYLVSLQDL 961
Query: 2994 TNCPFRVVDEINQGMDPINERNMFQQLVRAASQPNSPQCFLLTPKLLPNLVYGEACSILT 3173
TNCPFRVVDEINQGMDPINER MFQQLVRAASQ N+PQCFLLTPKLLP L Y EAC+IL
Sbjct: 962 TNCPFRVVDEINQGMDPINERKMFQQLVRAASQTNTPQCFLLTPKLLPELEYSEACTILN 1021
Query: 3174 VMNGPWVESPSNAWKDGGRWGQIM 3245
+MNGPW+E PS AW +G WG +M
Sbjct: 1022 IMNGPWIEQPSRAWSNGDSWGTLM 1045
>ref|XP_002517770.1| structural maintenance of chromosomes 5 smc5, putative [Ricinus
communis] gi|223543042|gb|EEF44577.1| structural
maintenance of chromosomes 5 smc5, putative [Ricinus
communis]
Length = 1057
Score = 1356 bits (3510), Expect = 0.0
Identities = 684/1055 (64%), Positives = 830/1055 (78%)
Frame = +3
Query: 87 MSRKHSTPVSERSAKRAKLTKRGEDDYMPGNITEIELHNFMTFSQIKCKPGPRLNLVIGP 266
M R V R++KRAK T RGEDDYMPGNI E+ELHNFMT+ + CKPG RLNLVIGP
Sbjct: 1 MKRSSIAEVPNRTSKRAKTT-RGEDDYMPGNIIEMELHNFMTYDHLFCKPGSRLNLVIGP 59
Query: 267 NGSGKSSLVCAIALGLGGEPQLLGRATSVGAFVKRGEDAGFIRISLRGDTMGEQLTITRQ 446
NGSGKSS+VCAIALGLGGEPQLLGRATSVGA+VKRGE+ +I+ISLRG+T E++TI R+
Sbjct: 60 NGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEECAYIKISLRGNTKDERITIMRK 119
Query: 447 IESKSNKSEWLFNGKSVPKKDVLEIIKRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEET 626
I++ NKSEWL+NGK VPKK++ EI +RFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEET
Sbjct: 120 IDTH-NKSEWLYNGKVVPKKEIGEITQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEET 178
Query: 627 EKAVGDPELPVRHHALIEKSRELKRLELSVKQNGDTLNQLKALNAEQEKDVERVRQREQL 806
EKAVGDP+LP++H AL+EKSRELK +E++V++NG+TLNQLKALNAE EKDVERVRQRE+L
Sbjct: 179 EKAVGDPQLPIQHRALVEKSRELKNIEVAVERNGETLNQLKALNAELEKDVERVRQREEL 238
Query: 807 LAKVESMRKKLPWLKYDKVKVDFLQAKEAEKDAEGKMNESINILNDLNLPVEKQKKLREV 986
L KVE M+KKLPWLKYD K ++L+AKE EKDA+ K+ E++ I+ DL P++KQKK + +
Sbjct: 239 LEKVEWMKKKLPWLKYDMKKAEYLEAKEQEKDAQKKLEEAVKIMKDLKEPIDKQKKDKSL 298
Query: 987 QDIALKNVSKLIAKNNAKRMERLENESRLGVQVVGSYKEMDELRRQEESRQHRILRAKED 1166
D K V LI +N +RME LE E+ L V G KEM++L+RQEESRQ RIL+AK D
Sbjct: 299 LDSKCKKVLSLINENTKQRMELLEKENHLEVNFKGKRKEMEDLKRQEESRQQRILKAKND 358
Query: 1167 XXXXXXXXXXXPIFEPPKSEIDNLAAQIRELDFXXXXXXXXXXXXXXVLNQKKTTLWQCK 1346
P +EPP L QI EL F +L+QK+ L QC
Sbjct: 359 LTAAEIELRNLPTYEPPTDVFGRLHNQIVELQFSAKEKRLQKSETEKLLDQKRLLLKQCL 418
Query: 1347 ERLADMESIHTKLLEALKRNGAEYIFEAYRWVQEHRNEFNKEVFGPVLLEVKIPNREHAA 1526
++L DME KLL+AL+ +GAE IF+AY+WV++HRNE EV+GPVLLEV + +R HA
Sbjct: 419 DKLKDMEDTKNKLLQALRNSGAEKIFDAYKWVEQHRNELKAEVYGPVLLEVNVSDRMHAD 478
Query: 1527 YVENHVSFYIWRSFITQDAADRDLLVKNLKLFDVAILNYVADRGNHKVPFEVSEEMQKVG 1706
Y+E V +YIW+SFITQD DRD+LVKNLK FDV ILNYV D + K F+VSE+M ++G
Sbjct: 479 YLEGQVPYYIWKSFITQDPTDRDVLVKNLKAFDVPILNYVRDESHPKEAFQVSEKMHELG 538
Query: 1707 IYSRLDQVFDAPNAVKEVLTSQFMLDNSYIGSEETDRKADGVPELGIRDLWTPDNHYRWT 1886
IYSRLDQVFDAP+AVKEVL SQF LD SYIGS+ETD+KAD V +L I D WTP+NHYRW+
Sbjct: 539 IYSRLDQVFDAPHAVKEVLISQFGLDRSYIGSKETDQKADEVAKLKIWDFWTPENHYRWS 598
Query: 1887 TSRYGGHISASVEPVSPSHLFLCSVDAGEIQKRRDRKEELEESISHLEGSIRFLQTEQRH 2066
SRYGGH+S SVEPV S L LCS D+GEI++ + RK EL+ES++ LE S + LQ EQR
Sbjct: 599 PSRYGGHVSGSVEPVDRSRLLLCSSDSGEIERLKCRKHELQESVTALEESFKVLQREQRQ 658
Query: 2067 YEDEAAKLRKQREDISSNAQLEKKKRRDMESRVYQRKRKLESIENEDDMETNMKKLVDQV 2246
E+E A+L+K+RE+I SN Q EK+KR+DME+ V QRKRKLES+E E D++T+M KL+D+
Sbjct: 659 LENEEAELQKEREEIISNVQHEKRKRKDMENLVNQRKRKLESVEKEVDLDTSMAKLIDES 718
Query: 2247 SRLNMQRLQNAIEIKNMLVEAVSLKRSSAEKHITCIELEAKISKLRQNLKDQEKLVKQAS 2426
+ +RLQ AI IKN+L EAVS + S AEKH+ IE + KI +L NLK EK+ +QA+
Sbjct: 719 ENIKRERLQCAIAIKNLLFEAVSNRWSLAEKHMATIEFDTKIRELEFNLKQHEKVARQAA 778
Query: 2427 VHFEDCKQSTEHYKEKLAAAKRHAESIAKITPELSKEFLEMPGTIEELDAAIQDNTSQAN 2606
+H E CK+ E ++++L++AK AES++ ITPEL K FLEMP TIEEL+AAIQDN SQAN
Sbjct: 779 LHVEYCKKEVEEHRQQLSSAKISAESVSIITPELEKAFLEMPTTIEELEAAIQDNMSQAN 838
Query: 2607 SILFLNKNVLEEYENRQRKIENFAEKLGAADTELKACLSEIDNLKQSWLLTLRNLVSHIN 2786
SILFLN NVLEEYE+RQ+KIE+ KL A ELK CL+EID+LK+SWL TLRNLV+ IN
Sbjct: 839 SILFLNHNVLEEYEHRQQKIESMTRKLEADKEELKRCLAEIDDLKESWLPTLRNLVARIN 898
Query: 2787 DTFSRNFQEMAVAGEVSLDEHEMDFDKFGILIKVKFRQAGELQVLSAHHQSGGERSVSTI 2966
+TFSRNFQEMAVAGEVSLDEH+ DFD++GILIKVKFRQAG+LQVLSAHHQSGGERSVST+
Sbjct: 899 ETFSRNFQEMAVAGEVSLDEHDKDFDQYGILIKVKFRQAGQLQVLSAHHQSGGERSVSTV 958
Query: 2967 LYLVSLQDITNCPFRVVDEINQGMDPINERNMFQQLVRAASQPNSPQCFLLTPKLLPNLV 3146
LYLVSLQD+TNCPFRVVDEINQGMDPINER MFQQLVRAASQPN+PQCFLLTPKLLP+L
Sbjct: 959 LYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLE 1018
Query: 3147 YGEACSILTVMNGPWVESPSNAWKDGGRWGQIMGL 3251
Y EACSIL +MNGPW+E P+ W G W + L
Sbjct: 1019 YSEACSILNIMNGPWIEQPAKVWSSGESWRAVARL 1053
>ref|NP_197096.1| structural maintenance of chromosomes 5 [Arabidopsis thaliana]
gi|9755638|emb|CAC01791.1| putative protein [Arabidopsis
thaliana] gi|332004841|gb|AED92224.1| structural
maintenance of chromosomes 5 [Arabidopsis thaliana]
Length = 1053
Score = 1311 bits (3394), Expect = 0.0
Identities = 654/1044 (62%), Positives = 819/1044 (78%)
Frame = +3
Query: 111 VSERSAKRAKLTKRGEDDYMPGNITEIELHNFMTFSQIKCKPGPRLNLVIGPNGSGKSSL 290
+SER AKR K++ RGEDD++PGNI EIELHNFMTF+ + CKPG RLNLVIGPNGSGKSSL
Sbjct: 1 MSERRAKRPKIS-RGEDDFLPGNIIEIELHNFMTFNHLVCKPGSRLNLVIGPNGSGKSSL 59
Query: 291 VCAIALGLGGEPQLLGRATSVGAFVKRGEDAGFIRISLRGDTMGEQLTITRQIESKSNKS 470
VCAIAL LGGEPQLLGRATSVGA+VKRGED+G+++ISLRG+T E LTI R+I+++ NKS
Sbjct: 60 VCAIALCLGGEPQLLGRATSVGAYVKRGEDSGYVKISLRGNTREENLTIFRKIDTR-NKS 118
Query: 471 EWLFNGKSVPKKDVLEIIKRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPE 650
EW+FNG +V KKD++EII++FNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDP+
Sbjct: 119 EWMFNGSTVSKKDIVEIIQKFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQ 178
Query: 651 LPVRHHALIEKSRELKRLELSVKQNGDTLNQLKALNAEQEKDVERVRQREQLLAKVESMR 830
LPV H AL+EKSR+LK+LE +V +NG+TLNQLKAL EQEKDVERVRQRE L KV+SM+
Sbjct: 179 LPVHHRALVEKSRDLKQLERAVAKNGETLNQLKALVDEQEKDVERVRQRELFLTKVDSMK 238
Query: 831 KKLPWLKYDKVKVDFLQAKEAEKDAEGKMNESINILNDLNLPVEKQKKLREVQDIALKNV 1010
KKLPWLKYD K +++ AK+ K+AE K++E+ LN + P+EKQKK + D K V
Sbjct: 239 KKLPWLKYDMKKAEYMDAKKRMKEAEKKLDEAAKNLNSMKEPIEKQKKEKAETDSKCKKV 298
Query: 1011 SKLIAKNNAKRMERLENESRLGVQVVGSYKEMDELRRQEESRQHRILRAKEDXXXXXXXX 1190
L+ N R LE E +VV +YKE++EL++QEE RQ RIL+A ED
Sbjct: 299 KNLMDANGRNRCHLLEKEDEADARVVATYKELEELKKQEEHRQERILKATEDLVAAEREL 358
Query: 1191 XXXPIFEPPKSEIDNLAAQIRELDFXXXXXXXXXXXXXXVLNQKKTTLWQCKERLADMES 1370
P++E P ++++ L++Q+ EL +L+QK+ TL QC ++L DME+
Sbjct: 359 QNLPVYERPVAKLEELSSQVTELHHSINGKKNQKEDNEKLLSQKRYTLRQCVDKLKDMEN 418
Query: 1371 IHTKLLEALKRNGAEYIFEAYRWVQEHRNEFNKEVFGPVLLEVKIPNREHAAYVENHVSF 1550
+ KLL+AL +GA+ IF+AY+WVQ++R+EF +EV+GPVL+EV +PNRE+A ++E HVSF
Sbjct: 419 ANNKLLKALANSGADRIFDAYQWVQQNRHEFKREVYGPVLVEVNVPNRENACFLEGHVSF 478
Query: 1551 YIWRSFITQDAADRDLLVKNLKLFDVAILNYVADRGNHKVPFEVSEEMQKVGIYSRLDQV 1730
YIW+SFITQD DRDLLVKNLK FDV +LNYV + GN K PF +S++M+ +GI++RLDQ+
Sbjct: 479 YIWKSFITQDPEDRDLLVKNLKRFDVPVLNYVGNSGNQKAPFHISDQMRSLGIHARLDQI 538
Query: 1731 FDAPNAVKEVLTSQFMLDNSYIGSEETDRKADGVPELGIRDLWTPDNHYRWTTSRYGGHI 1910
FDAP+AVKEVL SQF L++SYIGS+ TD++A+ V +LGI+D WTPDNHYRW++SRYGGH
Sbjct: 539 FDAPDAVKEVLNSQFGLEDSYIGSKITDQRAEEVYKLGIKDFWTPDNHYRWSSSRYGGHS 598
Query: 1911 SASVEPVSPSHLFLCSVDAGEIQKRRDRKEELEESISHLEGSIRFLQTEQRHYEDEAAKL 2090
SASV+ V S L LC VD GE++K R RKEELE+SI +E + + LQTEQR E+EAAKL
Sbjct: 599 SASVDSVYQSRLLLCGVDVGELEKLRSRKEELEDSILFMEETHKSLQTEQRRLEEEAAKL 658
Query: 2091 RKQREDISSNAQLEKKKRRDMESRVYQRKRKLESIENEDDMETNMKKLVDQVSRLNMQRL 2270
K+RE+I + + LEKKKRR++ESR QRK KLES+E E+DM+ ++ KL+DQ SR N R
Sbjct: 659 HKEREEIVNVSYLEKKKRRELESRYQQRKTKLESLEQEEDMDASVAKLIDQASRANADRY 718
Query: 2271 QNAIEIKNMLVEAVSLKRSSAEKHITCIELEAKISKLRQNLKDQEKLVKQASVHFEDCKQ 2450
AI +K +LVEAV+ K S AEKH+ IELE KI + N+K EK +Q S+ E CK+
Sbjct: 719 TYAINLKKLLVEAVAHKWSYAEKHMASIELERKIRESEINIKQYEKTAQQLSLAVEYCKK 778
Query: 2451 STEHYKEKLAAAKRHAESIAKITPELSKEFLEMPGTIEELDAAIQDNTSQANSILFLNKN 2630
E +++LA AKR AES+A ITPEL KEF+EMP T+EEL+AAIQDN SQANSILF+N+N
Sbjct: 779 EVEGKQQRLATAKRDAESVATITPELKKEFMEMPTTVEELEAAIQDNLSQANSILFINEN 838
Query: 2631 VLEEYENRQRKIENFAEKLGAADTELKACLSEIDNLKQSWLLTLRNLVSHINDTFSRNFQ 2810
+L+EYE+RQ +I + KL +L C+ EID+LK+ WL TLR LV IN+TFS NFQ
Sbjct: 839 ILQEYEHRQSQIYTISTKLETDKRDLSICMKEIDSLKEKWLPTLRQLVGQINETFSHNFQ 898
Query: 2811 EMAVAGEVSLDEHEMDFDKFGILIKVKFRQAGELQVLSAHHQSGGERSVSTILYLVSLQD 2990
EMAVAGEVSLDE + DFD++GI IKVKFR++G+LQVLS+HHQSGGERSVSTILYLVSLQD
Sbjct: 899 EMAVAGEVSLDERDTDFDQYGIHIKVKFRESGQLQVLSSHHQSGGERSVSTILYLVSLQD 958
Query: 2991 ITNCPFRVVDEINQGMDPINERNMFQQLVRAASQPNSPQCFLLTPKLLPNLVYGEACSIL 3170
+TNCPFRVVDEINQGMDPINER MFQQLVRAASQPN+PQCFLLTPKLLP L Y EACSIL
Sbjct: 959 LTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPELEYSEACSIL 1018
Query: 3171 TVMNGPWVESPSNAWKDGGRWGQI 3242
+MNGP++ PS W G WG +
Sbjct: 1019 NIMNGPYIAEPSKVWSLGDSWGSL 1042