BLASTX nr result

ID: Coptis23_contig00003404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003404
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279323.1| PREDICTED: uncharacterized protein LOC100262...   166   3e-39
ref|NP_001235605.1| uncharacterized protein LOC100305709 [Glycin...   165   8e-39
ref|XP_002872869.1| predicted protein [Arabidopsis lyrata subsp....   164   1e-38
ref|XP_003626011.1| hypothetical protein MTR_7g109980 [Medicago ...   162   5e-38
ref|NP_849284.1| uncharacterized protein [Arabidopsis thaliana] ...   160   2e-37

>ref|XP_002279323.1| PREDICTED: uncharacterized protein LOC100262326 [Vitis vinifera]
           gi|297744029|emb|CBI36999.3| unnamed protein product
           [Vitis vinifera]
          Length = 129

 Score =  166 bits (420), Expect = 3e-39
 Identities = 85/123 (69%), Positives = 98/123 (79%), Gaps = 2/123 (1%)
 Frame = +3

Query: 39  EKE-EEFVYRISTAEEWEELQKKGFSFGVELDKTTCCFHLSKLDQVKGTLQNFF-KGRDD 212
           EKE EEFVYRISTA+EWEELQK G  +G +LDK+T C HLS L QV+ TLQNFF K + +
Sbjct: 7   EKEAEEFVYRISTAQEWEELQKAGACYGGQLDKSTGCIHLSNLHQVQSTLQNFFMKTQAE 66

Query: 213 LYLLQIHTKKLGDGLIYEADDNSNFFPHFYGPSRSFGPLPFDAVTRAEKLTLLGGQFSCC 392
           LYLLQ+ +KKLGDGLIYE  D  N FPHFYGPSRSF PLP DAVT+AEK+TL  G+FSC 
Sbjct: 67  LYLLQVDSKKLGDGLIYERVDECNVFPHFYGPSRSFIPLPLDAVTKAEKITLSDGKFSCS 126

Query: 393 WLD 401
            L+
Sbjct: 127 LLN 129


>ref|NP_001235605.1| uncharacterized protein LOC100305709 [Glycine max]
           gi|255626377|gb|ACU13533.1| unknown [Glycine max]
          Length = 120

 Score =  165 bits (417), Expect = 8e-39
 Identities = 81/118 (68%), Positives = 93/118 (78%), Gaps = 1/118 (0%)
 Frame = +3

Query: 51  EFVYRISTAEEWEELQKKGFSFGVELDKTTCCFHLSKLDQVKGTLQNFF-KGRDDLYLLQ 227
           E VYRISTA+EWEELQ  G SFG +LDK++   HLSKLDQV+ TL+NFF   +++LYLLQ
Sbjct: 3   ELVYRISTAKEWEELQSNGSSFGGDLDKSSAFIHLSKLDQVRSTLENFFLNSKEELYLLQ 62

Query: 228 IHTKKLGDGLIYEADDNSNFFPHFYGPSRSFGPLPFDAVTRAEKLTLLGGQFSCCWLD 401
           I  KKLGDGL+YE  D  N FPHFYGPSRSF PLP DAVT+AEKLTL  G+FSC  LD
Sbjct: 63  IDAKKLGDGLVYEIVDGKNSFPHFYGPSRSFVPLPLDAVTKAEKLTLTDGRFSCSLLD 120


>ref|XP_002872869.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318706|gb|EFH49128.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score =  164 bits (416), Expect = 1e-38
 Identities = 77/119 (64%), Positives = 94/119 (78%), Gaps = 1/119 (0%)
 Frame = +3

Query: 45  EEEFVYRISTAEEWEELQKKGFSFGVELDKTTCCFHLSKLDQVKGTLQNFFKG-RDDLYL 221
           EE+F+YRIST +EWEE QK G SFG E+DK+TC +HLSKLDQV+ TL+NFF   ++DLYL
Sbjct: 3   EEDFIYRISTEQEWEEFQKNGSSFGAEIDKSTCYYHLSKLDQVQLTLKNFFLNVKEDLYL 62

Query: 222 LQIHTKKLGDGLIYEADDNSNFFPHFYGPSRSFGPLPFDAVTRAEKLTLLGGQFSCCWL 398
           LQ+  KKLGDGLIYEA D  N FPHFYGP ++F PLP D+V +AEKLT   G F+C +L
Sbjct: 63  LQVDPKKLGDGLIYEAVDEVNSFPHFYGPEKTFVPLPLDSVVKAEKLTFTNGNFTCSFL 121


>ref|XP_003626011.1| hypothetical protein MTR_7g109980 [Medicago truncatula]
           gi|355501026|gb|AES82229.1| hypothetical protein
           MTR_7g109980 [Medicago truncatula]
           gi|388506772|gb|AFK41452.1| unknown [Medicago
           truncatula]
          Length = 120

 Score =  162 bits (410), Expect = 5e-38
 Identities = 79/118 (66%), Positives = 94/118 (79%), Gaps = 1/118 (0%)
 Frame = +3

Query: 51  EFVYRISTAEEWEELQKKGFSFGVELDKTTCCFHLSKLDQVKGTLQNFF-KGRDDLYLLQ 227
           +FVYRISTA+EWEELQ+ G +FG ELDK++   HLSKL+QV+ TL NFF   +D+LYLLQ
Sbjct: 3   DFVYRISTAKEWEELQRNGSTFGGELDKSSSFIHLSKLEQVRSTLDNFFLNSKDELYLLQ 62

Query: 228 IHTKKLGDGLIYEADDNSNFFPHFYGPSRSFGPLPFDAVTRAEKLTLLGGQFSCCWLD 401
           I  KKLGDGL+YE  D SN FPHFYGPSRSF PLP D VT+AE+L+L  G+FSC  LD
Sbjct: 63  IDAKKLGDGLVYEIVDGSNSFPHFYGPSRSFIPLPLDVVTKAEELSLSNGRFSCSLLD 120


>ref|NP_849284.1| uncharacterized protein [Arabidopsis thaliana]
           gi|21555678|gb|AAM63912.1| unknown [Arabidopsis
           thaliana] gi|89001077|gb|ABD59128.1| At4g01897
           [Arabidopsis thaliana] gi|332656693|gb|AEE82093.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 122

 Score =  160 bits (405), Expect = 2e-37
 Identities = 75/119 (63%), Positives = 94/119 (78%), Gaps = 1/119 (0%)
 Frame = +3

Query: 45  EEEFVYRISTAEEWEELQKKGFSFGVELDKTTCCFHLSKLDQVKGTLQNFFKG-RDDLYL 221
           EEEF+YRIST +EWEE +K G S+G E+DK+TC +HLSKLDQV+ TL+NFF   ++ LYL
Sbjct: 3   EEEFIYRISTEQEWEEFKKNGSSYGAEIDKSTCYYHLSKLDQVQLTLKNFFVDVKEYLYL 62

Query: 222 LQIHTKKLGDGLIYEADDNSNFFPHFYGPSRSFGPLPFDAVTRAEKLTLLGGQFSCCWL 398
           LQ+  KKLGDGLIYEA D  N FPHFYGP ++F PLP D+V +AEKLT + G F+C +L
Sbjct: 63  LQVDPKKLGDGLIYEAVDEVNSFPHFYGPDKTFVPLPLDSVVKAEKLTFINGNFTCSFL 121


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