BLASTX nr result
ID: Coptis23_contig00003398
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00003398
(1573 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277218.2| PREDICTED: eukaryotic initiation factor iso-... 687 0.0
emb|CBI36548.3| unnamed protein product [Vitis vinifera] 687 0.0
emb|CAN70546.1| hypothetical protein VITISV_013807 [Vitis vinifera] 687 0.0
ref|XP_003633181.1| PREDICTED: eukaryotic initiation factor iso-... 685 0.0
ref|XP_003549535.1| PREDICTED: eukaryotic initiation factor iso-... 661 0.0
>ref|XP_002277218.2| PREDICTED: eukaryotic initiation factor iso-4F subunit p82-34-like
isoform 1 [Vitis vinifera]
Length = 794
Score = 687 bits (1774), Expect = 0.0
Identities = 349/436 (80%), Positives = 390/436 (89%), Gaps = 10/436 (2%)
Frame = -1
Query: 1279 FGSISSDLPILRPHGGGLAPSS-SLKTGDPWSEGQERVKYTRDQLLQLREAVAVREDILN 1103
FGS SSDLP+LRPHGG APSS S+K GD EG+ERV++TRD+LLQLRE V V EDIL
Sbjct: 41 FGS-SSDLPVLRPHGG--APSSFSIKAGDSRFEGRERVRFTRDKLLQLREVVDVPEDILK 97
Query: 1102 IKREIEAELLGEDQSWGRGDANAQTQSQNRYSEPDNRDWRGRSSQLPAAGEERSWGENKD 923
IK+EIEAEL GEDQ+WGRG++N QSQ+RYSEPDNRDWRGRS+QLPA+GEERSW +++
Sbjct: 98 IKQEIEAELFGEDQNWGRGESNLPNQSQSRYSEPDNRDWRGRSAQLPASGEERSWFDSRQ 157
Query: 922 -----LRQQEQLSAQFSRAQI----GGPTATLIKAEVPWSARRGTLSEKDRVLKTVKGIL 770
+Q+QL++QF++AQI GGP L+KAEVPWSARR LSEK+RVLKTVKGIL
Sbjct: 158 QEANQFNRQDQLNSQFAKAQISSVLGGPAPALVKAEVPWSARRVNLSEKERVLKTVKGIL 217
Query: 769 NKLTPEKFDLLKGQLIDSGITTPDILKDVISLIFEKAVLEPTFCNMYAILCSDLNEKLPP 590
NKLTPEKFDLLKGQLIDSGITT DILK VISLIF+KAVLEPTFC MYA+LCSDLNEKLPP
Sbjct: 218 NKLTPEKFDLLKGQLIDSGITTADILKGVISLIFDKAVLEPTFCPMYALLCSDLNEKLPP 277
Query: 589 FPSDEPGGKDITFKRVLLNNCQEAFEGAENLRAEVRQMTAPEQEMERRDKERMLKLRTLG 410
FPSDEPGGK+ITFKRVLLNNCQEAFEG++ LRAE+RQMTAPEQE+ERRDKERM+KLRTLG
Sbjct: 278 FPSDEPGGKEITFKRVLLNNCQEAFEGSDKLRAEIRQMTAPEQELERRDKERMVKLRTLG 337
Query: 409 NIRLIGELLKQKMVPEKIVHHIVQELLGQDPKICPDEENVEAICQFFNTIGKQLDESPKS 230
NIRLIGELLKQKMVPEKIVHHIVQELLG D K CPDEENVEAICQFFNTIGKQLDES KS
Sbjct: 338 NIRLIGELLKQKMVPEKIVHHIVQELLGHDNKSCPDEENVEAICQFFNTIGKQLDESTKS 397
Query: 229 RRVNDAYFNRMKELTTHPQLAPRLRFMVRDVLDLRANKWVPRREEIKAKTITEIHSDAEK 50
RR+ND YF+R+KELTT+PQLAPRLRFMVRDVLDLRAN WVPRREE+KAKTITEIH++AEK
Sbjct: 398 RRINDMYFSRLKELTTNPQLAPRLRFMVRDVLDLRANSWVPRREEVKAKTITEIHTEAEK 457
Query: 49 TLGLRPGATASMRVTR 2
LGLRPGATAS+R +R
Sbjct: 458 NLGLRPGATASIRNSR 473
>emb|CBI36548.3| unnamed protein product [Vitis vinifera]
Length = 630
Score = 687 bits (1774), Expect = 0.0
Identities = 349/436 (80%), Positives = 390/436 (89%), Gaps = 10/436 (2%)
Frame = -1
Query: 1279 FGSISSDLPILRPHGGGLAPSS-SLKTGDPWSEGQERVKYTRDQLLQLREAVAVREDILN 1103
FGS SSDLP+LRPHGG APSS S+K GD EG+ERV++TRD+LLQLRE V V EDIL
Sbjct: 41 FGS-SSDLPVLRPHGG--APSSFSIKAGDSRFEGRERVRFTRDKLLQLREVVDVPEDILK 97
Query: 1102 IKREIEAELLGEDQSWGRGDANAQTQSQNRYSEPDNRDWRGRSSQLPAAGEERSWGENKD 923
IK+EIEAEL GEDQ+WGRG++N QSQ+RYSEPDNRDWRGRS+QLPA+GEERSW +++
Sbjct: 98 IKQEIEAELFGEDQNWGRGESNLPNQSQSRYSEPDNRDWRGRSAQLPASGEERSWFDSRQ 157
Query: 922 -----LRQQEQLSAQFSRAQI----GGPTATLIKAEVPWSARRGTLSEKDRVLKTVKGIL 770
+Q+QL++QF++AQI GGP L+KAEVPWSARR LSEK+RVLKTVKGIL
Sbjct: 158 QEANQFNRQDQLNSQFAKAQISSVLGGPAPALVKAEVPWSARRVNLSEKERVLKTVKGIL 217
Query: 769 NKLTPEKFDLLKGQLIDSGITTPDILKDVISLIFEKAVLEPTFCNMYAILCSDLNEKLPP 590
NKLTPEKFDLLKGQLIDSGITT DILK VISLIF+KAVLEPTFC MYA+LCSDLNEKLPP
Sbjct: 218 NKLTPEKFDLLKGQLIDSGITTADILKGVISLIFDKAVLEPTFCPMYALLCSDLNEKLPP 277
Query: 589 FPSDEPGGKDITFKRVLLNNCQEAFEGAENLRAEVRQMTAPEQEMERRDKERMLKLRTLG 410
FPSDEPGGK+ITFKRVLLNNCQEAFEG++ LRAE+RQMTAPEQE+ERRDKERM+KLRTLG
Sbjct: 278 FPSDEPGGKEITFKRVLLNNCQEAFEGSDKLRAEIRQMTAPEQELERRDKERMVKLRTLG 337
Query: 409 NIRLIGELLKQKMVPEKIVHHIVQELLGQDPKICPDEENVEAICQFFNTIGKQLDESPKS 230
NIRLIGELLKQKMVPEKIVHHIVQELLG D K CPDEENVEAICQFFNTIGKQLDES KS
Sbjct: 338 NIRLIGELLKQKMVPEKIVHHIVQELLGHDNKSCPDEENVEAICQFFNTIGKQLDESTKS 397
Query: 229 RRVNDAYFNRMKELTTHPQLAPRLRFMVRDVLDLRANKWVPRREEIKAKTITEIHSDAEK 50
RR+ND YF+R+KELTT+PQLAPRLRFMVRDVLDLRAN WVPRREE+KAKTITEIH++AEK
Sbjct: 398 RRINDMYFSRLKELTTNPQLAPRLRFMVRDVLDLRANSWVPRREEVKAKTITEIHTEAEK 457
Query: 49 TLGLRPGATASMRVTR 2
LGLRPGATAS+R +R
Sbjct: 458 NLGLRPGATASIRNSR 473
>emb|CAN70546.1| hypothetical protein VITISV_013807 [Vitis vinifera]
Length = 794
Score = 687 bits (1774), Expect = 0.0
Identities = 349/436 (80%), Positives = 390/436 (89%), Gaps = 10/436 (2%)
Frame = -1
Query: 1279 FGSISSDLPILRPHGGGLAPSS-SLKTGDPWSEGQERVKYTRDQLLQLREAVAVREDILN 1103
FGS SSDLP+LRPHGG APSS S+K GD EG+ERV++TRD+LLQLRE V V EDIL
Sbjct: 41 FGS-SSDLPVLRPHGG--APSSFSIKAGDSRFEGRERVRFTRDKLLQLREVVDVPEDILK 97
Query: 1102 IKREIEAELLGEDQSWGRGDANAQTQSQNRYSEPDNRDWRGRSSQLPAAGEERSWGENKD 923
IK+EIEAEL GEDQ+WGRG++N QSQ+RYSEPDNRDWRGRS+QLPA+GEERSW +++
Sbjct: 98 IKQEIEAELFGEDQNWGRGESNLPNQSQSRYSEPDNRDWRGRSAQLPASGEERSWFDSRQ 157
Query: 922 -----LRQQEQLSAQFSRAQI----GGPTATLIKAEVPWSARRGTLSEKDRVLKTVKGIL 770
+Q+QL++QF++AQI GGP L+KAEVPWSARR LSEK+RVLKTVKGIL
Sbjct: 158 QEANQFNRQDQLNSQFAKAQISSVQGGPAPALVKAEVPWSARRVNLSEKERVLKTVKGIL 217
Query: 769 NKLTPEKFDLLKGQLIDSGITTPDILKDVISLIFEKAVLEPTFCNMYAILCSDLNEKLPP 590
NKLTPEKFDLLKGQLIDSGITT DILK VISLIF+KAVLEPTFC MYA+LCSDLNEKLPP
Sbjct: 218 NKLTPEKFDLLKGQLIDSGITTADILKGVISLIFDKAVLEPTFCPMYALLCSDLNEKLPP 277
Query: 589 FPSDEPGGKDITFKRVLLNNCQEAFEGAENLRAEVRQMTAPEQEMERRDKERMLKLRTLG 410
FPSDEPGGK+ITFKRVLLNNCQEAFEG++ LRAE+RQMTAPEQE+ERRDKERM+KLRTLG
Sbjct: 278 FPSDEPGGKEITFKRVLLNNCQEAFEGSDKLRAEIRQMTAPEQELERRDKERMVKLRTLG 337
Query: 409 NIRLIGELLKQKMVPEKIVHHIVQELLGQDPKICPDEENVEAICQFFNTIGKQLDESPKS 230
NIRLIGELLKQKMVPEKIVHHIVQELLG D K CPDEENVEAICQFFNTIGKQLDES KS
Sbjct: 338 NIRLIGELLKQKMVPEKIVHHIVQELLGHDNKSCPDEENVEAICQFFNTIGKQLDESTKS 397
Query: 229 RRVNDAYFNRMKELTTHPQLAPRLRFMVRDVLDLRANKWVPRREEIKAKTITEIHSDAEK 50
RR+ND YF+R+KELTT+PQLAPRLRFMVRDVLDLRAN WVPRREE+KAKTITEIH++AEK
Sbjct: 398 RRINDMYFSRLKELTTNPQLAPRLRFMVRDVLDLRANSWVPRREEVKAKTITEIHTEAEK 457
Query: 49 TLGLRPGATASMRVTR 2
LGLRPGATAS+R +R
Sbjct: 458 NLGLRPGATASIRNSR 473
>ref|XP_003633181.1| PREDICTED: eukaryotic initiation factor iso-4F subunit p82-34-like
isoform 2 [Vitis vinifera]
Length = 795
Score = 685 bits (1767), Expect = 0.0
Identities = 348/437 (79%), Positives = 389/437 (89%), Gaps = 11/437 (2%)
Frame = -1
Query: 1279 FGSISSDLPILRPHGGGLAPSS-SLKTGDPWSEGQERVKYTRDQLLQLREAVAVREDILN 1103
FGS SSDLP+LRPHGG APSS S+K GD EG+ERV++TRD+LLQLRE V V EDIL
Sbjct: 41 FGS-SSDLPVLRPHGG--APSSFSIKAGDSRFEGRERVRFTRDKLLQLREVVDVPEDILK 97
Query: 1102 IKREIEAELLGEDQSWGRGDANAQTQSQNRYSEPDNRDWRGRSSQLPAAGEERSWGENKD 923
IK+EIEAEL GEDQ+WGRG++N QSQ+RYSEPDNRDWRGRS+QLPA+GEERSW +++
Sbjct: 98 IKQEIEAELFGEDQNWGRGESNLPNQSQSRYSEPDNRDWRGRSAQLPASGEERSWFDSRQ 157
Query: 922 -----LRQQEQLSAQFSRAQIG-----GPTATLIKAEVPWSARRGTLSEKDRVLKTVKGI 773
+Q+QL++QF++AQI GP L+KAEVPWSARR LSEK+RVLKTVKGI
Sbjct: 158 QEANQFNRQDQLNSQFAKAQISSVLGVGPAPALVKAEVPWSARRVNLSEKERVLKTVKGI 217
Query: 772 LNKLTPEKFDLLKGQLIDSGITTPDILKDVISLIFEKAVLEPTFCNMYAILCSDLNEKLP 593
LNKLTPEKFDLLKGQLIDSGITT DILK VISLIF+KAVLEPTFC MYA+LCSDLNEKLP
Sbjct: 218 LNKLTPEKFDLLKGQLIDSGITTADILKGVISLIFDKAVLEPTFCPMYALLCSDLNEKLP 277
Query: 592 PFPSDEPGGKDITFKRVLLNNCQEAFEGAENLRAEVRQMTAPEQEMERRDKERMLKLRTL 413
PFPSDEPGGK+ITFKRVLLNNCQEAFEG++ LRAE+RQMTAPEQE+ERRDKERM+KLRTL
Sbjct: 278 PFPSDEPGGKEITFKRVLLNNCQEAFEGSDKLRAEIRQMTAPEQELERRDKERMVKLRTL 337
Query: 412 GNIRLIGELLKQKMVPEKIVHHIVQELLGQDPKICPDEENVEAICQFFNTIGKQLDESPK 233
GNIRLIGELLKQKMVPEKIVHHIVQELLG D K CPDEENVEAICQFFNTIGKQLDES K
Sbjct: 338 GNIRLIGELLKQKMVPEKIVHHIVQELLGHDNKSCPDEENVEAICQFFNTIGKQLDESTK 397
Query: 232 SRRVNDAYFNRMKELTTHPQLAPRLRFMVRDVLDLRANKWVPRREEIKAKTITEIHSDAE 53
SRR+ND YF+R+KELTT+PQLAPRLRFMVRDVLDLRAN WVPRREE+KAKTITEIH++AE
Sbjct: 398 SRRINDMYFSRLKELTTNPQLAPRLRFMVRDVLDLRANSWVPRREEVKAKTITEIHTEAE 457
Query: 52 KTLGLRPGATASMRVTR 2
K LGLRPGATAS+R +R
Sbjct: 458 KNLGLRPGATASIRNSR 474
>ref|XP_003549535.1| PREDICTED: eukaryotic initiation factor iso-4F subunit p82-34-like
isoform 1 [Glycine max]
Length = 789
Score = 661 bits (1706), Expect = 0.0
Identities = 335/439 (76%), Positives = 377/439 (85%), Gaps = 13/439 (2%)
Frame = -1
Query: 1279 FGSISSDLPILRPHGGGLAPSSSLKTGDPWSEGQERVKYTRDQLLQLREAVAVREDILNI 1100
FGS S+DLP+LRPH G +P S +K GD EG+ERV+YTR+QLLQL+E V + +D+L I
Sbjct: 38 FGSFSADLPLLRPHAGAPSPFS-IKAGDARFEGRERVRYTREQLLQLKEGVEILDDVLKI 96
Query: 1099 KREIEAELLGEDQSWGRGDANAQTQSQNRYSEPDNRDWRGRSSQLPAAGEERSWGENKDL 920
K++IEAEL GEDQSW R + N Q QNRY+EPDNRDWRGRS QL +ERSW K+
Sbjct: 97 KQDIEAELFGEDQSWARPENNPTQQFQNRYTEPDNRDWRGRSGQLSGNADERSWDNLKEN 156
Query: 919 RQ-------QEQLSAQFSRAQI-----GGPTATLIKAEVPWSARRGTLSEKDRVLKTVKG 776
R+ Q+QL++QF+R QI GGPT TL+KAEVPWSARRGTLS+KDRVLKTVKG
Sbjct: 157 REFGNTSNRQDQLNSQFARTQISSNQGGGPTPTLVKAEVPWSARRGTLSDKDRVLKTVKG 216
Query: 775 ILNKLTPEKFDLLKGQLIDSGITTPDILKDVISLIFEKAVLEPTFCNMYAILCSDLNEKL 596
ILNKLTPEKFDLLKGQLIDSGIT+ DILK VISLIF+KAVLEPTFC MYA LCSDLNEKL
Sbjct: 217 ILNKLTPEKFDLLKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAQLCSDLNEKL 276
Query: 595 PPFPSDEPGGKDITFKRVLLNNCQEAFEGAENLRAEVRQMTAPEQEMERRDKERMLKLRT 416
PPFPSDEPGGK+ITFKRVLLN CQEAFEGA+ LR E+RQMTAP+QEMERRDKER++K+RT
Sbjct: 277 PPFPSDEPGGKEITFKRVLLNICQEAFEGADKLREELRQMTAPDQEMERRDKERLVKIRT 336
Query: 415 LGNIRLIGELLKQKMVPEKIVHHIVQELLG-QDPKICPDEENVEAICQFFNTIGKQLDES 239
LGNIRLIGELLKQKMVPEKIVHHIVQELLG D K+CP EENVEAICQFFNTIGKQLDES
Sbjct: 337 LGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDIKVCPAEENVEAICQFFNTIGKQLDES 396
Query: 238 PKSRRVNDAYFNRMKELTTHPQLAPRLRFMVRDVLDLRANKWVPRREEIKAKTITEIHSD 59
PKSRR+ND YF R+KEL+T+PQLAPRLRFMVRDVLDLR+N W+PRREE+KAKTITEIHS+
Sbjct: 397 PKSRRINDMYFIRLKELSTNPQLAPRLRFMVRDVLDLRSNNWIPRREEVKAKTITEIHSE 456
Query: 58 AEKTLGLRPGATASMRVTR 2
AEK LGLRPGATASMR R
Sbjct: 457 AEKNLGLRPGATASMRNNR 475