BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003395
         (874 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276795.1| PREDICTED: protein TIC 20-II, chloroplastic ...   242   7e-62
ref|XP_002328962.1| predicted protein [Populus trichocarpa] gi|1...   220   3e-55
ref|XP_004139099.1| PREDICTED: protein TIC 20-II, chloroplastic-...   209   9e-52
ref|XP_002882135.1| hypothetical protein ARALYDRAFT_483969 [Arab...   199   7e-49
gb|AAK91363.1| At2g47840/F17A22.23 [Arabidopsis thaliana] gi|203...   198   2e-48

>ref|XP_002276795.1| PREDICTED: protein TIC 20-II, chloroplastic [Vitis vinifera]
           gi|147792791|emb|CAN71033.1| hypothetical protein
           VITISV_000355 [Vitis vinifera]
          Length = 218

 Score =  242 bits (618), Expect = 7e-62
 Identities = 132/219 (60%), Positives = 156/219 (71%), Gaps = 10/219 (4%)
 Frame = +2

Query: 230 MAATTLLRFSLHLSP--QTLKSPFLSHTPLRHY-NFPTPRISPLKSS------NSKPIIA 382
           MA+  LLR SLH     + L  P+ + +      NFP P    L+ S       S+P I 
Sbjct: 1   MASIPLLRLSLHRQTPLKPLHQPYSAASITAQLPNFPHPLKPTLQISPRPLRPRSRPSIT 60

Query: 383 MSSYQPVPATERLISACAYFLPFFNGLQYGRYLFMKYPSLGLLIEPIFPLLKAYRSVPYA 562
           MS Y  VPATERLISA AY LPFFNGLQYGR+L M+YP+LGL++EPI P+L  YRS+PYA
Sbjct: 61  MS-YSAVPATERLISAAAYCLPFFNGLQYGRFLLMQYPALGLVLEPILPILSLYRSIPYA 119

Query: 563 SFVAFFALYLGVVRNPSFSKYVRFNSMQXXXXXXXXXXXXXFQRIFSPGK-GLGLQLLVM 739
           SFVAFFALYLGVVRNPSFS++VRFNSMQ               RIF+PG+ G+G +L+VM
Sbjct: 120 SFVAFFALYLGVVRNPSFSRFVRFNSMQAVVLDVLLVVPLLVNRIFNPGRAGVGFRLMVM 179

Query: 740 GYNGIFVFIVFCFLYSLGFCVLGRTPYLPFVADAADRQL 856
           G+N IFVF+V CFLYSLGFC+LGRTPYLPFVADAA RQL
Sbjct: 180 GHNAIFVFVVACFLYSLGFCILGRTPYLPFVADAAGRQL 218


>ref|XP_002328962.1| predicted protein [Populus trichocarpa] gi|118482664|gb|ABK93251.1|
           unknown [Populus trichocarpa]
           gi|222839196|gb|EEE77547.1| predicted protein [Populus
           trichocarpa]
          Length = 209

 Score =  220 bits (561), Expect = 3e-55
 Identities = 117/213 (54%), Positives = 146/213 (68%), Gaps = 4/213 (1%)
 Frame = +2

Query: 230 MAATTLLRFSLHLSPQTLKSPFLSHTPLRHYNFP-TP--RISPLKSSNSKPIIAMSSYQP 400
           MA+ +LLR SL  +P+TL     SH P   +N P TP  +  P    + K  +   SY P
Sbjct: 1   MASISLLRLSLIPTPKTLSK---SH-PFSSFNPPLTPFLKFPPKTRLSQKSTVTRMSYNP 56

Query: 401 VPATERLISACAYFLPFFNGLQYGRYLFMKYPSLGLLIEPIFPLLKAYRSVPYASFVAFF 580
            PAT+RL+SA +Y LPFFN LQYGR+LF  YPSL LL++P+ PLL  YRS+PYASFVAFF
Sbjct: 57  TPATDRLVSAVSYTLPFFNSLQYGRFLFTTYPSLALLVDPLIPLLSLYRSIPYASFVAFF 116

Query: 581 ALYLGVVRNPSFSKYVRFNSMQXXXXXXXXXXXXXFQRIFSPGK-GLGLQLLVMGYNGIF 757
           ALYLGVVRNPSFS+YVRFN+MQ               RI SPG+ GLG +L+V G+N +F
Sbjct: 117 ALYLGVVRNPSFSQYVRFNAMQAVTLDVLLVVPLLLTRILSPGRAGLGFKLMVWGHNALF 176

Query: 758 VFIVFCFLYSLGFCVLGRTPYLPFVADAADRQL 856
           +F  FCF+Y L   VLG+TPYLPF+A+AA RQ+
Sbjct: 177 LFSCFCFVYGLASSVLGKTPYLPFIAEAAGRQV 209


>ref|XP_004139099.1| PREDICTED: protein TIC 20-II, chloroplastic-like [Cucumis sativus]
           gi|449485336|ref|XP_004157137.1| PREDICTED: protein TIC
           20-II, chloroplastic-like [Cucumis sativus]
          Length = 208

 Score =  209 bits (531), Expect = 9e-52
 Identities = 114/212 (53%), Positives = 141/212 (66%), Gaps = 3/212 (1%)
 Frame = +2

Query: 230 MAATT--LLRFSLHLSPQTLKSPFLSHTPLRHYNFPTPRISPLKSSNSKPIIAMSSYQPV 403
           MA+T+  LL  S   S +    P  S    RH++  +    P KS    PI    SY P 
Sbjct: 1   MASTSIPLLNLSAKTSIRAALFPHSSAIKSRHHS--SLPFLPSKSPKFTPI--RMSYNPT 56

Query: 404 PATERLISACAYFLPFFNGLQYGRYLFMKYPSLGLLIEPIFPLLKAYRSVPYASFVAFFA 583
           PAT+RLISA AY LPFFN LQYGR+LF +YP+LG   EP+ P+L  YRS+P++SFVAFFA
Sbjct: 57  PATDRLISAVAYTLPFFNSLQYGRFLFAQYPALGFAFEPLLPILGLYRSIPHSSFVAFFA 116

Query: 584 LYLGVVRNPSFSKYVRFNSMQXXXXXXXXXXXXXFQRIFSPGK-GLGLQLLVMGYNGIFV 760
           LYLGVVRNPSF+ YVRFNSMQ              QRI SPG+ G+G +++V  +NG+FV
Sbjct: 117 LYLGVVRNPSFNHYVRFNSMQAVTLDVLLVVPLLIQRILSPGRSGIGFKIMVWSHNGLFV 176

Query: 761 FIVFCFLYSLGFCVLGRTPYLPFVADAADRQL 856
           F V CFLYS+  C+LGRTP+LP VADAA RQ+
Sbjct: 177 FSVLCFLYSVVSCLLGRTPHLPIVADAAGRQI 208


>ref|XP_002882135.1| hypothetical protein ARALYDRAFT_483969 [Arabidopsis lyrata subsp.
           lyrata] gi|297327974|gb|EFH58394.1| hypothetical protein
           ARALYDRAFT_483969 [Arabidopsis lyrata subsp. lyrata]
          Length = 209

 Score =  199 bits (506), Expect = 7e-49
 Identities = 106/207 (51%), Positives = 132/207 (63%), Gaps = 4/207 (1%)
 Frame = +2

Query: 248 LRFSLHLSPQTLKSPFLSHTPLRHYNFPTPRISPLKSSNSKP--IIAMSSYQPVPATERL 421
           L  SLH +  T     L   PL   +FP      ++ S  +   +   +SY P PATER+
Sbjct: 4   LCLSLHQTLNTNPLAALRGRPLS-LSFPGSSTVSIRPSGRRATAVTTRASYTPTPATERV 62

Query: 422 ISACAYFLPFFNGLQYGRYLFMKYPSLGLLIEPIFPLLKAYRSVPYASFVAFFALYLGVV 601
           IS  +Y LPFFN LQYGR+LF +YP LGLL EPIFP+L  YRSVPYASFVAFF LYLGVV
Sbjct: 63  ISIASYALPFFNSLQYGRFLFAQYPRLGLLFEPIFPILNLYRSVPYASFVAFFGLYLGVV 122

Query: 602 RNPSFSKYVRFNSMQXXXXXXXXXXXXXFQRIFSPGK--GLGLQLLVMGYNGIFVFIVFC 775
           RN S S+YVRFN+MQ               RI  PG+  G G++ ++ G+ G+FVF   C
Sbjct: 123 RNTSLSRYVRFNAMQAVTLDVLLAVPVLLTRILDPGQGGGFGMKAMMWGHTGVFVFSSMC 182

Query: 776 FLYSLGFCVLGRTPYLPFVADAADRQL 856
           F+Y +  C+LG+TPY+PFVADAA RQL
Sbjct: 183 FVYGVVSCLLGKTPYIPFVADAAGRQL 209


>gb|AAK91363.1| At2g47840/F17A22.23 [Arabidopsis thaliana]
           gi|20334890|gb|AAM16201.1| At2g47840/F17A22.23
           [Arabidopsis thaliana]
          Length = 208

 Score =  198 bits (503), Expect = 2e-48
 Identities = 109/209 (52%), Positives = 133/209 (63%), Gaps = 6/209 (2%)
 Frame = +2

Query: 248 LRFSLHLSPQTLKSPFLSHTPLRHYNFPTPRISPLK----SSNSKPIIAMSSYQPVPATE 415
           L  SLH   QTL +P LS    R  +   P  S       S  +  +   +SY P PATE
Sbjct: 4   LCLSLH---QTLTNP-LSAPRCRPLSLSFPGSSTFSTRPSSRRATALTTRASYTPTPATE 59

Query: 416 RLISACAYFLPFFNGLQYGRYLFMKYPSLGLLIEPIFPLLKAYRSVPYASFVAFFALYLG 595
           R+IS  +Y LPFFN LQYGR+LF +YP LGLL EPIFP+L  YRSVPYASFVAFF LYLG
Sbjct: 60  RVISIASYALPFFNSLQYGRFLFAQYPRLGLLFEPIFPILNLYRSVPYASFVAFFGLYLG 119

Query: 596 VVRNPSFSKYVRFNSMQXXXXXXXXXXXXXFQRIFSPGK--GLGLQLLVMGYNGIFVFIV 769
           VVRN SFS+YVRFN+MQ               RI  PG+  G G++ ++ G+ G+FVF  
Sbjct: 120 VVRNTSFSRYVRFNAMQAVTLDVLLAVPVLLTRILDPGQGGGFGMKAMMWGHTGVFVFSF 179

Query: 770 FCFLYSLGFCVLGRTPYLPFVADAADRQL 856
            CF+Y +   +LG+TPY+PFVADAA RQL
Sbjct: 180 MCFVYGVVSSLLGKTPYIPFVADAAGRQL 208