BLASTX nr result

ID: Coptis23_contig00003383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003383
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21528.3| unnamed protein product [Vitis vinifera]               99   5e-19
ref|XP_002275743.1| PREDICTED: uncharacterized protein LOC100259...    99   5e-19
ref|XP_002530260.1| conserved hypothetical protein [Ricinus comm...    78   8e-13
ref|XP_004161813.1| PREDICTED: uncharacterized protein LOC101228...    72   4e-11
ref|XP_004148453.1| PREDICTED: uncharacterized protein LOC101212...    72   4e-11

>emb|CBI21528.3| unnamed protein product [Vitis vinifera]
          Length = 206

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 61/119 (51%), Positives = 69/119 (57%), Gaps = 7/119 (5%)
 Frame = -1

Query: 338 EPIIMATKTTLLLIPYSHLQNHRIPIFKTSLPSLSQHCKTACFPIPMFSSPKTVFHGVSK 159
           +P    TKT        + QN + PI  T+ P L    KTA FP   FS  KT F  VS 
Sbjct: 6   KPSYFLTKTAF------YFQNPQSPIPNTAFPPLLPRRKTAYFPDTSFSLRKTSFRAVS- 58

Query: 158 ITAVLDTKEET-------SVRIMALFGEESVSPLKCAPWEEVMVHTANRLKWVDEGFEM 3
             AVL+T E          VRI+AL G+ SVSPLKCAPW EVM+HTA RLKWVDEGFEM
Sbjct: 59  --AVLETNETPLADQLAPPVRIVALVGDGSVSPLKCAPWVEVMLHTAQRLKWVDEGFEM 115


>ref|XP_002275743.1| PREDICTED: uncharacterized protein LOC100259321 [Vitis vinifera]
          Length = 532

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 61/119 (51%), Positives = 69/119 (57%), Gaps = 7/119 (5%)
 Frame = -1

Query: 338 EPIIMATKTTLLLIPYSHLQNHRIPIFKTSLPSLSQHCKTACFPIPMFSSPKTVFHGVSK 159
           +P    TKT        + QN + PI  T+ P L    KTA FP   FS  KT F  VS 
Sbjct: 6   KPSYFLTKTAF------YFQNPQSPIPNTAFPPLLPRRKTAYFPDTSFSLRKTSFRAVS- 58

Query: 158 ITAVLDTKEET-------SVRIMALFGEESVSPLKCAPWEEVMVHTANRLKWVDEGFEM 3
             AVL+T E          VRI+AL G+ SVSPLKCAPW EVM+HTA RLKWVDEGFEM
Sbjct: 59  --AVLETNETPLADQLAPPVRIVALVGDGSVSPLKCAPWVEVMLHTAQRLKWVDEGFEM 115


>ref|XP_002530260.1| conserved hypothetical protein [Ricinus communis]
           gi|223530226|gb|EEF32130.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 541

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 46/85 (54%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
 Frame = -1

Query: 236 SQHCKTACFPIPMFSSPKTVFHGVSKITAVLD-----TKEETS--VRIMALFGEESVSPL 78
           S H   + FP       K V   ++KI AVL+     T E++   VRI+AL GE SVSPL
Sbjct: 41  SSHRLISSFPF----RAKNVNRQLTKIPAVLERESAVTHEQSDPPVRIVALVGEGSVSPL 96

Query: 77  KCAPWEEVMVHTANRLKWVDEGFEM 3
           KCA WEEVM+HTA RLKWVDEG+EM
Sbjct: 97  KCATWEEVMLHTAKRLKWVDEGYEM 121


>ref|XP_004161813.1| PREDICTED: uncharacterized protein LOC101228126 [Cucumis sativus]
          Length = 531

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 45/101 (44%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
 Frame = -1

Query: 302 LIPYSHL-QNHRIPIFKTSLPSLSQHCKTACFPIPMFSSPKTVFHGVSKITAVLDTKEET 126
           L P+ H   +HR P   T  P+LS           + + P  V    +K  A+ DT    
Sbjct: 21  LNPHFHFFLSHRKP---TYFPTLSMPSHRPTVSRRLLTVPPPVVAEANKNMAMADTP--- 74

Query: 125 SVRIMALFGEESVSPLKCAPWEEVMVHTANRLKWVDEGFEM 3
            VRI+A+ GE S+SPLK  PWEEVM+HTA RLKWVDE +EM
Sbjct: 75  -VRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWVDECYEM 114


>ref|XP_004148453.1| PREDICTED: uncharacterized protein LOC101212663 [Cucumis sativus]
          Length = 531

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 45/101 (44%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
 Frame = -1

Query: 302 LIPYSHL-QNHRIPIFKTSLPSLSQHCKTACFPIPMFSSPKTVFHGVSKITAVLDTKEET 126
           L P+ H   +HR P   T  P+LS           + + P  V    +K  A+ DT    
Sbjct: 21  LNPHFHFFLSHRKP---TYFPTLSMPSHRPTVSRRLLTVPPPVVAEANKNMAMADTP--- 74

Query: 125 SVRIMALFGEESVSPLKCAPWEEVMVHTANRLKWVDEGFEM 3
            VRI+A+ GE S+SPLK  PWEEVM+HTA RLKWVDE +EM
Sbjct: 75  -VRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWVDECYEM 114


Top