BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003376
         (2418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein lig...   488   0.0  
ref|XP_002321983.1| predicted protein [Populus trichocarpa] gi|2...   490   0.0  
emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera]   487   0.0  
ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein lig...   483   0.0  
ref|XP_003601869.1| RCC1 domain-containing protein [Medicago tru...   488   0.0  

>ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 1
            [Vitis vinifera] gi|296081404|emb|CBI16837.3| unnamed
            protein product [Vitis vinifera]
          Length = 534

 Score =  488 bits (1256), Expect(3) = 0.0
 Identities = 240/321 (74%), Positives = 261/321 (81%)
 Frame = +1

Query: 727  LQATCSFFKQPANFAPDYELSISELAALDMCRKRAVFKPMTTSEQEELKQRCGGSWKLVL 906
            L+ATCSFF+QPA+FAPD+ELSISELAALDMC KRA+F+PM   E+E LKQRCGGSWKLVL
Sbjct: 74   LEATCSFFRQPAHFAPDFELSISELAALDMCLKRAIFRPMMLEEREVLKQRCGGSWKLVL 133

Query: 907  RFLLAGEACCRREKFQAIAGPGHSIVVTSKGKVYSFGSNSSGQLGHGTLEEESRPHPIRS 1086
            RFLLAGEACCRREK QAIAGPGHSI VT KG VYSFGSNSSGQLGHGT +EE RP  IRS
Sbjct: 134  RFLLAGEACCRREKSQAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWRPRQIRS 193

Query: 1087 LQGVRIIQAAAGAGRTMLISDAGHVYAFGKDSFGEAEYGAQGTKFVMTPHRLESLKNIFV 1266
            L+G+RIIQAAAGAGRTMLISDAG VYAFGKDSFGEAEYG QGTK V TP  +ESLKNIFV
Sbjct: 194  LEGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVESLKNIFV 253

Query: 1267 VQAAIGNFFTAILSREGRVYTFSWGNDATLGHQTDPSDLEPHPLLGPLENVPIVQIXXXX 1446
            VQAAIGNFFTA+LSREGRVYTFSWGNDA LGHQT+ +DLEPHPLLG LEN+P+VQI    
Sbjct: 254  VQAAIGNFFTAVLSREGRVYTFSWGNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGY 313

Query: 1447 XXXXXXXXQPGGMSVYSVXXXXXXXXXXXSRTDERYPKLIEQFQTLNLQPXXXXXXXXXX 1626
                    QP GMSVYSV           +RTDE++P+LIEQF+ LNLQP          
Sbjct: 314  CYLLALACQPNGMSVYSVGCGLGGKLGHGTRTDEKHPRLIEQFRILNLQPMVVAAGAWHA 373

Query: 1627 XXXGRDGRVCTWGWGRYGCLG 1689
               GRDGRVCTWGWGRYGCLG
Sbjct: 374  AVVGRDGRVCTWGWGRYGCLG 394



 Score =  221 bits (564), Expect(3) = 0.0
 Identities = 106/126 (84%), Positives = 114/126 (90%)
 Frame = +2

Query: 1769 VEALAEIKAVHVATGDYTTFVVSEDGDVYSFGCGESSSLGHNAGADGQENRHTNVLTPEL 1948
            VEAL  +KAVHVATGDYTTFVVS+DGDVYSFGCGESSSLGHN G DGQ NRH N+L+PEL
Sbjct: 407  VEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPEL 466

Query: 1949 VTSLKQVNERFVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGLELAGQQSERGNP 2128
            VTSLKQ+ ER VQISLTNSIYWNAHTFALTE+GKLYAFGAGDKGQLG+EL   Q+ERGNP
Sbjct: 467  VTSLKQIKERMVQISLTNSIYWNAHTFALTETGKLYAFGAGDKGQLGVELVANQTERGNP 526

Query: 2129 ELVDID 2146
            E VDID
Sbjct: 527  ERVDID 532



 Score =  117 bits (292), Expect(3) = 0.0
 Identities = 54/77 (70%), Positives = 61/77 (79%)
 Frame = +2

Query: 413 MDTTASGTPSIHYHNIVDQTXXXXXXXXXPTFQRQQRHCFGESTPGEFPLAANPSIVLHV 592
           MD T SGTP++ YHNI DQ          PTFQRQQRHCFG+S+PGEFPLAANPSIVLHV
Sbjct: 1   MDATRSGTPTVQYHNIPDQPIAAIVTSPLPTFQRQQRHCFGDSSPGEFPLAANPSIVLHV 60

Query: 593 LTGCDLDPQDLATLEAS 643
           LT C+L+PQDLA LEA+
Sbjct: 61  LTACNLEPQDLAKLEAT 77



 Score = 69.3 bits (168), Expect = 4e-09
 Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
 Frame = +1

Query: 1003 VYSFGSNSSGQLGHGTLEEESRPHPIRSLQGVRI--IQAAAGAGRTMLISDAGHVYAFGK 1176
            VYS G    G+LGHGT  +E  P  I   + + +  +  AAGA    ++   G V  +G 
Sbjct: 328  VYSVGCGLGGKLGHGTRTDEKHPRLIEQFRILNLQPMVVAAGAWHAAVVGRDGRVCTWGW 387

Query: 1177 DSFGEAEYGAQGTKFVMTPHRLESLKNIFVVQAAIGNFFTAILSREGRVYTFSWGNDATL 1356
              +G   +G +  + V  P  +E+L N+  V  A G++ T ++S +G VY+F  G  ++L
Sbjct: 388  GRYGCLGHGNEECESV--PKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSL 445

Query: 1357 GHQTDP 1374
            GH   P
Sbjct: 446  GHNNGP 451



 Score = 65.9 bits (159), Expect = 5e-08
 Identities = 46/167 (27%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
 Frame = +1

Query: 952  QAIAGPGHSIVVTSKGKVYSFGSNSSGQLGHGTLEEESRPHPIR-SLQGVRIIQAAAGAG 1128
            QA  G   + V++ +G+VY+F   +  +LGH T   +  PHP+  +L+ + ++Q AAG  
Sbjct: 255  QAAIGNFFTAVLSREGRVYTFSWGNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYC 314

Query: 1129 RTMLIS---DAGHVYAFGKDSFGEAEYGAQGTKFVMTPHRLESLK--NIFVVQAAIGNFF 1293
              + ++   +   VY+ G    G+  +G +  +    P  +E  +  N+  +  A G + 
Sbjct: 315  YLLALACQPNGMSVYSVGCGLGGKLGHGTRTDE--KHPRLIEQFRILNLQPMVVAAGAWH 372

Query: 1294 TAILSREGRVYTFSWGNDATLGHQTDPSDLEPHPLLGPLENVPIVQI 1434
             A++ R+GRV T+ WG    LGH  +  +  P  ++  L NV  V +
Sbjct: 373  AAVVGRDGRVCTWGWGRYGCLGHGNEECESVP-KVVEALINVKAVHV 418



 Score = 64.7 bits (156), Expect = 1e-07
 Identities = 49/146 (33%), Positives = 72/146 (49%), Gaps = 13/146 (8%)
 Frame = +1

Query: 961  AGPGHSIVVTSKGKVYSFGSNSSGQLGHGTLEEESRPHPIRSLQGVRIIQAAAGAGRTML 1140
            AG  H+ VV   G+V ++G    G LGHG  E ES P  + +L  V+ +  A G   T +
Sbjct: 368  AGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALINVKAVHVATGDYTTFV 427

Query: 1141 ISDAGHVYAFG---KDSFGEAE-YGAQGTKF--VMTPHRLESLKNI--FVVQAAIGNFF- 1293
            +SD G VY+FG     S G       QG +   +++P  + SLK I   +VQ ++ N   
Sbjct: 428  VSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPELVTSLKQIKERMVQISLTNSIY 487

Query: 1294 ----TAILSREGRVYTFSWGNDATLG 1359
                T  L+  G++Y F  G+   LG
Sbjct: 488  WNAHTFALTETGKLYAFGAGDKGQLG 513


>ref|XP_002321983.1| predicted protein [Populus trichocarpa] gi|222868979|gb|EEF06110.1|
            predicted protein [Populus trichocarpa]
          Length = 538

 Score =  490 bits (1262), Expect(3) = 0.0
 Identities = 240/319 (75%), Positives = 259/319 (81%)
 Frame = +1

Query: 733  ATCSFFKQPANFAPDYELSISELAALDMCRKRAVFKPMTTSEQEELKQRCGGSWKLVLRF 912
            ATCSFF+QPA+FAPDYELS+SELAALDMC+KRA+FKPMT  E+++LKQRCGGSWKLVLRF
Sbjct: 80   ATCSFFRQPASFAPDYELSMSELAALDMCQKRAIFKPMTPEERQDLKQRCGGSWKLVLRF 139

Query: 913  LLAGEACCRREKFQAIAGPGHSIVVTSKGKVYSFGSNSSGQLGHGTLEEESRPHPIRSLQ 1092
            LLAGEACCRRE+ QAIAGPGHSI VTS G  YSFGSNSSGQLGHGT EEE RP  IRSLQ
Sbjct: 140  LLAGEACCRRERSQAIAGPGHSIAVTSNGVAYSFGSNSSGQLGHGTTEEEWRPRQIRSLQ 199

Query: 1093 GVRIIQAAAGAGRTMLISDAGHVYAFGKDSFGEAEYGAQGTKFVMTPHRLESLKNIFVVQ 1272
            G+RIIQAAAG GRTMLISDAG VYAFGKDSFGEAEYG QGTK V TP  +ESLKNIFVVQ
Sbjct: 200  GIRIIQAAAGPGRTMLISDAGEVYAFGKDSFGEAEYGVQGTKTVTTPQLVESLKNIFVVQ 259

Query: 1273 AAIGNFFTAILSREGRVYTFSWGNDATLGHQTDPSDLEPHPLLGPLENVPIVQIXXXXXX 1452
            AAIGNFFTA+LSREGRVYTFSWGND  LGHQT+P+D+ PHPLLG LEN+P+VQI      
Sbjct: 260  AAIGNFFTAVLSREGRVYTFSWGNDGKLGHQTEPNDVVPHPLLGALENIPVVQIAAGYCY 319

Query: 1453 XXXXXXQPGGMSVYSVXXXXXXXXXXXSRTDERYPKLIEQFQTLNLQPXXXXXXXXXXXX 1632
                  QP GMSVYSV           SRTDE+YP+LIEQFQ LNLQP            
Sbjct: 320  LLALACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQLLNLQPMVVAAGAWHAAV 379

Query: 1633 XGRDGRVCTWGWGRYGCLG 1689
             GRDGRVCTWGWGRYGCLG
Sbjct: 380  VGRDGRVCTWGWGRYGCLG 398



 Score =  219 bits (558), Expect(3) = 0.0
 Identities = 103/126 (81%), Positives = 116/126 (92%)
 Frame = +2

Query: 1769 VEALAEIKAVHVATGDYTTFVVSEDGDVYSFGCGESSSLGHNAGADGQENRHTNVLTPEL 1948
            V+AL+++KAVHVATGDYTTFVVS+DGDVYSFGCGES+SLGHN   DGQ NRHTNVL+PEL
Sbjct: 411  VDALSKVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNGDGDGQGNRHTNVLSPEL 470

Query: 1949 VTSLKQVNERFVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGLELAGQQSERGNP 2128
            VTSLK+V ER VQISLTNS+YWNAHTFALTESGKL+AFGAGDKGQLG+EL   Q+ERGNP
Sbjct: 471  VTSLKEVKERVVQISLTNSVYWNAHTFALTESGKLFAFGAGDKGQLGMELVNNQTERGNP 530

Query: 2129 ELVDID 2146
            E VD+D
Sbjct: 531  EQVDVD 536



 Score =  113 bits (282), Expect(3) = 0.0
 Identities = 56/88 (63%), Positives = 62/88 (70%)
 Frame = +2

Query: 413 MDTTASGTPSIHYHNIVDQTXXXXXXXXXPTFQRQQRHCFGESTPGEFPLAANPSIVLHV 592
           MD+T SGTP+I YHNI DQ           T+QR QRHCFG+S PGEFPLAANPSIVLHV
Sbjct: 1   MDSTTSGTPTIQYHNITDQPVTAIVAVPVSTYQRNQRHCFGDSIPGEFPLAANPSIVLHV 60

Query: 593 LTGCDLDPQDLATLEASVMILICLIIRK 676
           LT C+LDPQDLA LEA   I  C   R+
Sbjct: 61  LTTCNLDPQDLAKLEAK-SIATCSFFRQ 87



 Score = 66.6 bits (161), Expect = 3e-08
 Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
 Frame = +1

Query: 1003 VYSFGSNSSGQLGHGTLEEESRPHPIRSLQGVRI--IQAAAGAGRTMLISDAGHVYAFGK 1176
            VYS G    G+LGHG+  +E  P  I   Q + +  +  AAGA    ++   G V  +G 
Sbjct: 332  VYSVGCGLGGKLGHGSRTDEKYPRLIEQFQLLNLQPMVVAAGAWHAAVVGRDGRVCTWGW 391

Query: 1177 DSFGEAEYGAQGTKFVMTPHRLESLKNIFVVQAAIGNFFTAILSREGRVYTFSWGNDATL 1356
              +G   +G +  + V  P  +++L  +  V  A G++ T ++S +G VY+F  G  A+L
Sbjct: 392  GRYGCLGHGNEECESV--PKVVDALSKVKAVHVATGDYTTFVVSDDGDVYSFGCGESASL 449

Query: 1357 GHQTD 1371
            GH  D
Sbjct: 450  GHNGD 454



 Score = 66.2 bits (160), Expect = 4e-08
 Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
 Frame = +1

Query: 952  QAIAGPGHSIVVTSKGKVYSFGSNSSGQLGHGTLEEESRPHPIR-SLQGVRIIQAAAGAG 1128
            QA  G   + V++ +G+VY+F   + G+LGH T   +  PHP+  +L+ + ++Q AAG  
Sbjct: 259  QAAIGNFFTAVLSREGRVYTFSWGNDGKLGHQTEPNDVVPHPLLGALENIPVVQIAAGYC 318

Query: 1129 RTMLIS---DAGHVYAFGKDSFGEAEYGAQGTKFVMTPHRLES--LKNIFVVQAAIGNFF 1293
              + ++       VY+ G    G+  +G++  +    P  +E   L N+  +  A G + 
Sbjct: 319  YLLALACQPSGMSVYSVGCGLGGKLGHGSRTDE--KYPRLIEQFQLLNLQPMVVAAGAWH 376

Query: 1294 TAILSREGRVYTFSWGNDATLGHQTDPSDLEP 1389
             A++ R+GRV T+ WG    LGH  +  +  P
Sbjct: 377  AAVVGRDGRVCTWGWGRYGCLGHGNEECESVP 408



 Score = 65.1 bits (157), Expect = 8e-08
 Identities = 50/146 (34%), Positives = 73/146 (50%), Gaps = 13/146 (8%)
 Frame = +1

Query: 961  AGPGHSIVVTSKGKVYSFGSNSSGQLGHGTLEEESRPHPIRSLQGVRIIQAAAGAGRTML 1140
            AG  H+ VV   G+V ++G    G LGHG  E ES P  + +L  V+ +  A G   T +
Sbjct: 372  AGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVDALSKVKAVHVATGDYTTFV 431

Query: 1141 ISDAGHVYAFG---KDSFGEAEYG-AQGTKF--VMTPHRLESLKNI--FVVQAAI----- 1281
            +SD G VY+FG     S G    G  QG +   V++P  + SLK +   VVQ ++     
Sbjct: 432  VSDDGDVYSFGCGESASLGHNGDGDGQGNRHTNVLSPELVTSLKEVKERVVQISLTNSVY 491

Query: 1282 GNFFTAILSREGRVYTFSWGNDATLG 1359
             N  T  L+  G+++ F  G+   LG
Sbjct: 492  WNAHTFALTESGKLFAFGAGDKGQLG 517


>emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera]
          Length = 541

 Score =  487 bits (1254), Expect(3) = 0.0
 Identities = 240/319 (75%), Positives = 259/319 (81%)
 Frame = +1

Query: 733  ATCSFFKQPANFAPDYELSISELAALDMCRKRAVFKPMTTSEQEELKQRCGGSWKLVLRF 912
            ATCSFF+QPA+FAPD+ELSISELAALDMC KRA+F+PM   E+E LKQRCGGSWKLVLRF
Sbjct: 78   ATCSFFRQPAHFAPDFELSISELAALDMCLKRAIFRPMXLEEREVLKQRCGGSWKLVLRF 137

Query: 913  LLAGEACCRREKFQAIAGPGHSIVVTSKGKVYSFGSNSSGQLGHGTLEEESRPHPIRSLQ 1092
            LLAGEACCRREK QAIAGPGHSI VT KG VYSFGSNSSGQLGHGT +EE RP  IRSL+
Sbjct: 138  LLAGEACCRREKSQAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWRPRQIRSLE 197

Query: 1093 GVRIIQAAAGAGRTMLISDAGHVYAFGKDSFGEAEYGAQGTKFVMTPHRLESLKNIFVVQ 1272
            G+RIIQAAAGAGRTMLISDAG VYAFGKDSFGEAEYG QGTK V TP  +ESLKNIFVVQ
Sbjct: 198  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVESLKNIFVVQ 257

Query: 1273 AAIGNFFTAILSREGRVYTFSWGNDATLGHQTDPSDLEPHPLLGPLENVPIVQIXXXXXX 1452
            AAIGNFFTA+LSREGRVYTFSWGNDA LGHQT+ +DLEPHPLLG LEN+P+VQI      
Sbjct: 258  AAIGNFFTAVLSREGRVYTFSWGNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCY 317

Query: 1453 XXXXXXQPGGMSVYSVXXXXXXXXXXXSRTDERYPKLIEQFQTLNLQPXXXXXXXXXXXX 1632
                  QP GMSVYSV           +RTDE++P+LIEQFQ LNLQP            
Sbjct: 318  LLALACQPNGMSVYSVGCGLGGKLGHGTRTDEKHPRLIEQFQILNLQPMVVAAGAWHAAV 377

Query: 1633 XGRDGRVCTWGWGRYGCLG 1689
             GRDGRVCTWGWGRYGCLG
Sbjct: 378  VGRDGRVCTWGWGRYGCLG 396



 Score =  214 bits (545), Expect(3) = 0.0
 Identities = 102/121 (84%), Positives = 110/121 (90%)
 Frame = +2

Query: 1769 VEALAEIKAVHVATGDYTTFVVSEDGDVYSFGCGESSSLGHNAGADGQENRHTNVLTPEL 1948
            VEAL  +KAVHVATGDYTTFVVS+DGDVYSFGCGESSSLGHN G DGQ NRH N+L+PEL
Sbjct: 409  VEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPEL 468

Query: 1949 VTSLKQVNERFVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGLELAGQQSERGNP 2128
            VTSLKQ+ ER VQISLTNSIYWNAHTFALTE+GKLYAFGAGDKGQLG+EL   Q+ERGNP
Sbjct: 469  VTSLKQIKERMVQISLTNSIYWNAHTFALTETGKLYAFGAGDKGQLGVELVXNQTERGNP 528

Query: 2129 E 2131
            E
Sbjct: 529  E 529



 Score =  118 bits (295), Expect(3) = 0.0
 Identities = 55/77 (71%), Positives = 61/77 (79%)
 Frame = +2

Query: 413 MDTTASGTPSIHYHNIVDQTXXXXXXXXXPTFQRQQRHCFGESTPGEFPLAANPSIVLHV 592
           MD T SGTP++ YHNI DQ          PTFQRQQRHCFG+S+PGEFPLAANPSIVLHV
Sbjct: 1   MDATRSGTPTVQYHNIPDQPIAAIVTSPLPTFQRQQRHCFGDSSPGEFPLAANPSIVLHV 60

Query: 593 LTGCDLDPQDLATLEAS 643
           LT C+L+PQDLA LEAS
Sbjct: 61  LTACNLEPQDLAKLEAS 77



 Score = 70.9 bits (172), Expect = 2e-09
 Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
 Frame = +1

Query: 1003 VYSFGSNSSGQLGHGTLEEESRPHPIRSLQGVRI--IQAAAGAGRTMLISDAGHVYAFGK 1176
            VYS G    G+LGHGT  +E  P  I   Q + +  +  AAGA    ++   G V  +G 
Sbjct: 330  VYSVGCGLGGKLGHGTRTDEKHPRLIEQFQILNLQPMVVAAGAWHAAVVGRDGRVCTWGW 389

Query: 1177 DSFGEAEYGAQGTKFVMTPHRLESLKNIFVVQAAIGNFFTAILSREGRVYTFSWGNDATL 1356
              +G   +G +  + V  P  +E+L N+  V  A G++ T ++S +G VY+F  G  ++L
Sbjct: 390  GRYGCLGHGNEECESV--PKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSL 447

Query: 1357 GHQTDP 1374
            GH   P
Sbjct: 448  GHNNGP 453



 Score = 65.5 bits (158), Expect = 6e-08
 Identities = 46/167 (27%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
 Frame = +1

Query: 952  QAIAGPGHSIVVTSKGKVYSFGSNSSGQLGHGTLEEESRPHPIR-SLQGVRIIQAAAGAG 1128
            QA  G   + V++ +G+VY+F   +  +LGH T   +  PHP+  +L+ + ++Q AAG  
Sbjct: 257  QAAIGNFFTAVLSREGRVYTFSWGNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYC 316

Query: 1129 RTMLIS---DAGHVYAFGKDSFGEAEYGAQGTKFVMTPHRLESLK--NIFVVQAAIGNFF 1293
              + ++   +   VY+ G    G+  +G +  +    P  +E  +  N+  +  A G + 
Sbjct: 317  YLLALACQPNGMSVYSVGCGLGGKLGHGTRTDE--KHPRLIEQFQILNLQPMVVAAGAWH 374

Query: 1294 TAILSREGRVYTFSWGNDATLGHQTDPSDLEPHPLLGPLENVPIVQI 1434
             A++ R+GRV T+ WG    LGH  +  +  P  ++  L NV  V +
Sbjct: 375  AAVVGRDGRVCTWGWGRYGCLGHGNEECESVP-KVVEALINVKAVHV 420



 Score = 64.7 bits (156), Expect = 1e-07
 Identities = 49/146 (33%), Positives = 72/146 (49%), Gaps = 13/146 (8%)
 Frame = +1

Query: 961  AGPGHSIVVTSKGKVYSFGSNSSGQLGHGTLEEESRPHPIRSLQGVRIIQAAAGAGRTML 1140
            AG  H+ VV   G+V ++G    G LGHG  E ES P  + +L  V+ +  A G   T +
Sbjct: 370  AGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALINVKAVHVATGDYTTFV 429

Query: 1141 ISDAGHVYAFG---KDSFGEAE-YGAQGTKF--VMTPHRLESLKNI--FVVQAAIGNFF- 1293
            +SD G VY+FG     S G       QG +   +++P  + SLK I   +VQ ++ N   
Sbjct: 430  VSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPELVTSLKQIKERMVQISLTNSIY 489

Query: 1294 ----TAILSREGRVYTFSWGNDATLG 1359
                T  L+  G++Y F  G+   LG
Sbjct: 490  WNAHTFALTETGKLYAFGAGDKGQLG 515


>ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
            max]
          Length = 535

 Score =  483 bits (1244), Expect(3) = 0.0
 Identities = 234/321 (72%), Positives = 260/321 (80%)
 Frame = +1

Query: 727  LQATCSFFKQPANFAPDYELSISELAALDMCRKRAVFKPMTTSEQEELKQRCGGSWKLVL 906
            L+ATCSFF+QPANFAPD +LS+SELAALDMC+KRA+FKPMTT ++++LK RCGGSWKL L
Sbjct: 74   LEATCSFFRQPANFAPDLDLSLSELAALDMCQKRAIFKPMTTEQRQDLKLRCGGSWKLAL 133

Query: 907  RFLLAGEACCRREKFQAIAGPGHSIVVTSKGKVYSFGSNSSGQLGHGTLEEESRPHPIRS 1086
            R+L+AGEACCRREK QAIAGPGHSI VTSKG VYSFGSNSSGQLGHGT +EE RP PIR+
Sbjct: 134  RYLMAGEACCRREKSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTDEEWRPRPIRT 193

Query: 1087 LQGVRIIQAAAGAGRTMLISDAGHVYAFGKDSFGEAEYGAQGTKFVMTPHRLESLKNIFV 1266
            LQG+RIIQAAAGAGRTML+SD+G VYAFGKDSFGEAEYG QG+K V  P  +ESLKNIFV
Sbjct: 194  LQGIRIIQAAAGAGRTMLVSDSGQVYAFGKDSFGEAEYGVQGSKTVAAPQIVESLKNIFV 253

Query: 1267 VQAAIGNFFTAILSREGRVYTFSWGNDATLGHQTDPSDLEPHPLLGPLENVPIVQIXXXX 1446
            VQAAIGNFFTA+LSREGRVYTFSWG+D  LGH TD SD+EPHPLLG LEN+P+VQI    
Sbjct: 254  VQAAIGNFFTAVLSREGRVYTFSWGSDGKLGHHTDQSDVEPHPLLGALENIPVVQIAAGY 313

Query: 1447 XXXXXXXXQPGGMSVYSVXXXXXXXXXXXSRTDERYPKLIEQFQTLNLQPXXXXXXXXXX 1626
                    QP GMSVYSV           SRTDE+YP+LIEQF  LNLQP          
Sbjct: 314  CYLLCLACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFGLLNLQPMVVAAGAWHA 373

Query: 1627 XXXGRDGRVCTWGWGRYGCLG 1689
               GRDGRVCTWGWGRYGCLG
Sbjct: 374  AVVGRDGRVCTWGWGRYGCLG 394



 Score =  218 bits (554), Expect(3) = 0.0
 Identities = 107/127 (84%), Positives = 116/127 (91%), Gaps = 1/127 (0%)
 Frame = +2

Query: 1769 VEALAEIKAVHVATGDYTTFVVSEDGDVYSFGCGESSSLGHNA-GADGQENRHTNVLTPE 1945
            VEAL+ +KAVHVATGDYTTFVVS+DGDVYSFGCGES+SLGHNA G D Q NRH NVL+PE
Sbjct: 407  VEALSNVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNAAGNDEQGNRHANVLSPE 466

Query: 1946 LVTSLKQVNERFVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGLELAGQQSERGN 2125
            LVTSLKQ+NER VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG+EL   Q+ERGN
Sbjct: 467  LVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVANQTERGN 526

Query: 2126 PELVDID 2146
            PE V+ID
Sbjct: 527  PERVEID 533



 Score =  117 bits (294), Expect(3) = 0.0
 Identities = 54/77 (70%), Positives = 61/77 (79%)
 Frame = +2

Query: 413 MDTTASGTPSIHYHNIVDQTXXXXXXXXXPTFQRQQRHCFGESTPGEFPLAANPSIVLHV 592
           MD T SGTP++ YHNI DQ          PTFQRQQRHCFG+STPGEFPL+ANPSIVLHV
Sbjct: 1   MDATTSGTPTVQYHNIPDQPITAIIATPLPTFQRQQRHCFGDSTPGEFPLSANPSIVLHV 60

Query: 593 LTGCDLDPQDLATLEAS 643
           LT C+L+PQDLA LEA+
Sbjct: 61  LTACNLEPQDLAKLEAT 77



 Score = 71.2 bits (173), Expect = 1e-09
 Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 6/167 (3%)
 Frame = +1

Query: 952  QAIAGPGHSIVVTSKGKVYSFGSNSSGQLGHGTLEEESRPHPIR-SLQGVRIIQAAAGAG 1128
            QA  G   + V++ +G+VY+F   S G+LGH T + +  PHP+  +L+ + ++Q AAG  
Sbjct: 255  QAAIGNFFTAVLSREGRVYTFSWGSDGKLGHHTDQSDVEPHPLLGALENIPVVQIAAGYC 314

Query: 1129 RTMLIS---DAGHVYAFGKDSFGEAEYGAQGTKFVMTPHRLES--LKNIFVVQAAIGNFF 1293
              + ++       VY+ G    G+  +G++  +    P  +E   L N+  +  A G + 
Sbjct: 315  YLLCLACQPSGMSVYSVGCGLGGKLGHGSRTDE--KYPRLIEQFGLLNLQPMVVAAGAWH 372

Query: 1294 TAILSREGRVYTFSWGNDATLGHQTDPSDLEPHPLLGPLENVPIVQI 1434
             A++ R+GRV T+ WG    LGH  +  +  P  ++  L NV  V +
Sbjct: 373  AAVVGRDGRVCTWGWGRYGCLGHGNEECESVP-KVVEALSNVKAVHV 418



 Score = 68.9 bits (167), Expect = 6e-09
 Identities = 49/147 (33%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
 Frame = +1

Query: 961  AGPGHSIVVTSKGKVYSFGSNSSGQLGHGTLEEESRPHPIRSLQGVRIIQAAAGAGRTML 1140
            AG  H+ VV   G+V ++G    G LGHG  E ES P  + +L  V+ +  A G   T +
Sbjct: 368  AGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALSNVKAVHVATGDYTTFV 427

Query: 1141 ISDAGHVYAFGKDSFGEAEYGAQGT-------KFVMTPHRLESLKNI--FVVQAAIGNFF 1293
            +SD G VY+FG        + A G          V++P  + SLK I   VVQ ++ N  
Sbjct: 428  VSDDGDVYSFGCGESASLGHNAAGNDEQGNRHANVLSPELVTSLKQINERVVQISLTNSI 487

Query: 1294 -----TAILSREGRVYTFSWGNDATLG 1359
                 T  L+  G++Y F  G+   LG
Sbjct: 488  YWNAHTFALTESGKLYAFGAGDKGQLG 514



 Score = 68.6 bits (166), Expect = 8e-09
 Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
 Frame = +1

Query: 1003 VYSFGSNSSGQLGHGTLEEESRPHPIRS--LQGVRIIQAAAGAGRTMLISDAGHVYAFGK 1176
            VYS G    G+LGHG+  +E  P  I    L  ++ +  AAGA    ++   G V  +G 
Sbjct: 328  VYSVGCGLGGKLGHGSRTDEKYPRLIEQFGLLNLQPMVVAAGAWHAAVVGRDGRVCTWGW 387

Query: 1177 DSFGEAEYGAQGTKFVMTPHRLESLKNIFVVQAAIGNFFTAILSREGRVYTFSWGNDATL 1356
              +G   +G +  + V  P  +E+L N+  V  A G++ T ++S +G VY+F  G  A+L
Sbjct: 388  GRYGCLGHGNEECESV--PKVVEALSNVKAVHVATGDYTTFVVSDDGDVYSFGCGESASL 445

Query: 1357 GHQTDPSD 1380
            GH    +D
Sbjct: 446  GHNAAGND 453


>ref|XP_003601869.1| RCC1 domain-containing protein [Medicago truncatula]
            gi|355490917|gb|AES72120.1| RCC1 domain-containing
            protein [Medicago truncatula]
          Length = 535

 Score =  488 bits (1255), Expect(3) = 0.0
 Identities = 235/321 (73%), Positives = 263/321 (81%)
 Frame = +1

Query: 727  LQATCSFFKQPANFAPDYELSISELAALDMCRKRAVFKPMTTSEQEELKQRCGGSWKLVL 906
            L+ATCSFF+QPANFAPD+ LS++ELAA DMC KRA+FKPMTT E+++LKQRCGGSWKLVL
Sbjct: 75   LEATCSFFRQPANFAPDFALSLAELAAFDMCMKRAIFKPMTTEERQDLKQRCGGSWKLVL 134

Query: 907  RFLLAGEACCRREKFQAIAGPGHSIVVTSKGKVYSFGSNSSGQLGHGTLEEESRPHPIRS 1086
            R+LLAGEACCRREK QAIAGPGHSI VTSKG VYSFGSNSSGQLGHGT EEE RP PIR+
Sbjct: 135  RYLLAGEACCRREKSQAIAGPGHSIAVTSKGDVYSFGSNSSGQLGHGTTEEEWRPKPIRT 194

Query: 1087 LQGVRIIQAAAGAGRTMLISDAGHVYAFGKDSFGEAEYGAQGTKFVMTPHRLESLKNIFV 1266
            LQG+RIIQAAAGAGRTMLI+D+G VYAFGKDSFGEAEYG QG+K V+ P  +ESLKNIFV
Sbjct: 195  LQGIRIIQAAAGAGRTMLITDSGQVYAFGKDSFGEAEYGGQGSKTVIAPRLVESLKNIFV 254

Query: 1267 VQAAIGNFFTAILSREGRVYTFSWGNDATLGHQTDPSDLEPHPLLGPLENVPIVQIXXXX 1446
            VQAAIGNFFTA+LSREGRVYTFSWG+D  LGH TD +D+EPHPLLG LE++P+VQI    
Sbjct: 255  VQAAIGNFFTAVLSREGRVYTFSWGSDGKLGHHTDSNDMEPHPLLGALEDIPVVQIAAGY 314

Query: 1447 XXXXXXXXQPGGMSVYSVXXXXXXXXXXXSRTDERYPKLIEQFQTLNLQPXXXXXXXXXX 1626
                    QP GMSVYSV           +RTDE++P+LIEQFQTLNLQP          
Sbjct: 315  CYLLCLACQPSGMSVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQTLNLQPMVISAGAWHA 374

Query: 1627 XXXGRDGRVCTWGWGRYGCLG 1689
               GRDGRVCTWGWGRYGCLG
Sbjct: 375  AVVGRDGRVCTWGWGRYGCLG 395



 Score =  215 bits (547), Expect(3) = 0.0
 Identities = 104/126 (82%), Positives = 112/126 (88%)
 Frame = +2

Query: 1769 VEALAEIKAVHVATGDYTTFVVSEDGDVYSFGCGESSSLGHNAGADGQENRHTNVLTPEL 1948
            V+AL  +KAVHVATGDYTTFVV+EDGDVYSFGCGES+SLGHNA  D + NRH NVL PEL
Sbjct: 408  VDALTNVKAVHVATGDYTTFVVAEDGDVYSFGCGESASLGHNAVIDAEGNRHANVLNPEL 467

Query: 1949 VTSLKQVNERFVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGLELAGQQSERGNP 2128
            VTSLKQ+NER VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG+EL   Q+ER NP
Sbjct: 468  VTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVANQTERVNP 527

Query: 2129 ELVDID 2146
            E VDID
Sbjct: 528  EQVDID 533



 Score =  110 bits (274), Expect(3) = 0.0
 Identities = 54/78 (69%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
 Frame = +2

Query: 413 MDTTASGTPSIHYHNIVDQTXXXXXXXXX-PTFQRQQRHCFGESTPGEFPLAANPSIVLH 589
           MD T SGTP+I YHNI DQT          PTFQRQQR C G STPGEFPL+A+PSIVLH
Sbjct: 1   MDATTSGTPTIQYHNITDQTITAIVVATPLPTFQRQQRQCLGNSTPGEFPLSASPSIVLH 60

Query: 590 VLTGCDLDPQDLATLEAS 643
           VLT C+LDPQDLA LEA+
Sbjct: 61  VLTSCNLDPQDLAKLEAT 78



 Score = 70.5 bits (171), Expect = 2e-09
 Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 5/166 (3%)
 Frame = +1

Query: 952  QAIAGPGHSIVVTSKGKVYSFGSNSSGQLGHGTLEEESRPHPIR-SLQGVRIIQAAAGAG 1128
            QA  G   + V++ +G+VY+F   S G+LGH T   +  PHP+  +L+ + ++Q AAG  
Sbjct: 256  QAAIGNFFTAVLSREGRVYTFSWGSDGKLGHHTDSNDMEPHPLLGALEDIPVVQIAAGYC 315

Query: 1129 RTMLIS---DAGHVYAFGKDSFGEAEYGAQ-GTKFVMTPHRLESLKNIFVVQAAIGNFFT 1296
              + ++       VY+ G    G+  +G +   KF     + ++L N+  +  + G +  
Sbjct: 316  YLLCLACQPSGMSVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQTL-NLQPMVISAGAWHA 374

Query: 1297 AILSREGRVYTFSWGNDATLGHQTDPSDLEPHPLLGPLENVPIVQI 1434
            A++ R+GRV T+ WG    LGH  +  +  P  ++  L NV  V +
Sbjct: 375  AVVGRDGRVCTWGWGRYGCLGHGNEECEAAP-KVVDALTNVKAVHV 419



 Score = 65.9 bits (159), Expect = 5e-08
 Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
 Frame = +1

Query: 1003 VYSFGSNSSGQLGHGTLEEESRPHPIRSLQGVRI--IQAAAGAGRTMLISDAGHVYAFGK 1176
            VYS G    G+LGHGT  +E  P  I   Q + +  +  +AGA    ++   G V  +G 
Sbjct: 329  VYSVGCGLGGKLGHGTRTDEKFPRLIEQFQTLNLQPMVISAGAWHAAVVGRDGRVCTWGW 388

Query: 1177 DSFGEAEYGAQGTKFVMTPHRLESLKNIFVVQAAIGNFFTAILSREGRVYTFSWGNDATL 1356
              +G   +G +  +    P  +++L N+  V  A G++ T +++ +G VY+F  G  A+L
Sbjct: 389  GRYGCLGHGNEECE--AAPKVVDALTNVKAVHVATGDYTTFVVAEDGDVYSFGCGESASL 446

Query: 1357 GH 1362
            GH
Sbjct: 447  GH 448



 Score = 65.1 bits (157), Expect = 8e-08
 Identities = 49/146 (33%), Positives = 73/146 (50%), Gaps = 13/146 (8%)
 Frame = +1

Query: 961  AGPGHSIVVTSKGKVYSFGSNSSGQLGHGTLEEESRPHPIRSLQGVRIIQAAAGAGRTML 1140
            AG  H+ VV   G+V ++G    G LGHG  E E+ P  + +L  V+ +  A G   T +
Sbjct: 369  AGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECEAAPKVVDALTNVKAVHVATGDYTTFV 428

Query: 1141 ISDAGHVYAFG---KDSFG-EAEYGAQGTKF--VMTPHRLESLKNI--FVVQAAIGNFF- 1293
            +++ G VY+FG     S G  A   A+G +   V+ P  + SLK I   VVQ ++ N   
Sbjct: 429  VAEDGDVYSFGCGESASLGHNAVIDAEGNRHANVLNPELVTSLKQINERVVQISLTNSIY 488

Query: 1294 ----TAILSREGRVYTFSWGNDATLG 1359
                T  L+  G++Y F  G+   LG
Sbjct: 489  WNAHTFALTESGKLYAFGAGDKGQLG 514