BLASTX nr result
ID: Coptis23_contig00003370
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00003370
(1141 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003547622.1| PREDICTED: probable LRR receptor-like serine... 62 1e-11
ref|XP_002526889.1| serine-threonine protein kinase, plant-type,... 60 5e-11
ref|XP_002330621.1| predicted protein [Populus trichocarpa] gi|2... 47 3e-10
ref|XP_003545235.1| PREDICTED: probable LRR receptor-like serine... 60 7e-10
ref|XP_002877545.1| hypothetical protein ARALYDRAFT_347816 [Arab... 48 1e-09
>ref|XP_003547622.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At3g47570-like [Glycine max]
Length = 991
Score = 61.6 bits (148), Expect(2) = 1e-11
Identities = 38/125 (30%), Positives = 68/125 (54%)
Frame = +3
Query: 405 HFITPLPLYYRNINRPKRIKNSVEQRS*NI*RRD*LTTMLVSGS*LSGPVPEDLGSLQHP 584
H + L +Y +N+ I S+ N+ + L+ + +SG+ +G VP LG L+
Sbjct: 242 HTLPNLQRFYVALNQ---ISGSIPPSIINVSK---LSVLEISGNQFTGQVPP-LGKLRDL 294
Query: 585 YRIHAGSNRLGSRAGSNMEFLSSLSNCTNLEVLSVCGNVP*GSIPKSMGIFFSTVENIDI 764
+ + N+LG + +N+EFL SL+NC+ LE+LS+ N G +P S+G + + +++
Sbjct: 295 FHLRLSWNKLGDNSANNLEFLKSLTNCSRLEMLSIADNNFGGHLPNSLGNLSTQLSQLNL 354
Query: 765 ENNTI 779
N I
Sbjct: 355 GGNQI 359
Score = 35.0 bits (79), Expect(2) = 1e-11
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +1
Query: 766 KIIQYLGNLIGLIYFGVADNLITGNIPNILGRLGYRNRLTVQISSYIGK 912
+I + +GNLIGL + + DN I G IP G+ L V I+ +G+
Sbjct: 362 EIPETIGNLIGLSFLTMQDNRIDGIIPTTFGKFQKMQVLDVSINKLLGE 410
>ref|XP_002526889.1| serine-threonine protein kinase, plant-type, putative [Ricinus
communis] gi|223533788|gb|EEF35520.1| serine-threonine
protein kinase, plant-type, putative [Ricinus communis]
Length = 891
Score = 60.5 bits (145), Expect(2) = 5e-11
Identities = 34/83 (40%), Positives = 49/83 (59%)
Frame = +3
Query: 531 GS*LSGPVPEDLGSLQHPYRIHAGSNRLGSRAGSNMEFLSSLSNCTNLEVLSVCGNVP*G 710
G+ SG VPE LG L++ + G N LGS + FLSSLSNCT LE+L++ GN G
Sbjct: 277 GNNFSGSVPETLGKLKNLQELLIGYNSLGSAKAGDFNFLSSLSNCTKLELLAIHGNRFGG 336
Query: 711 SIPKSMGIFFSTVENIDIENNTI 779
+P ++G S ++ + + N I
Sbjct: 337 VLPDAVGNLSSQLKMLFMGRNHI 359
Score = 33.9 bits (76), Expect(2) = 5e-11
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 11/94 (11%)
Frame = +1
Query: 769 IIQYLGNLIGLIYFGVADNLITGNIPNILGRLG-------YRNRLTVQISSYIGKXXXXX 927
I + +GNL+GL + N +TG IP +G+L +RN L ++ S+ G
Sbjct: 363 IPEAIGNLVGLTLLDMGINFLTGTIPVSVGKLRNIGRLFFHRNNLHGKVPSFFGNFSRLF 422
Query: 928 XXXXXXXXXYGIIHSNLSKC---QN-WLHRIQMS 1017
G I +L C QN +LH+ S
Sbjct: 423 DLYLHDNNFEGSIPISLKNCTEMQNLFLHKNNFS 456
>ref|XP_002330621.1| predicted protein [Populus trichocarpa] gi|222872225|gb|EEF09356.1|
predicted protein [Populus trichocarpa]
Length = 774
Score = 47.0 bits (110), Expect(2) = 3e-10
Identities = 29/90 (32%), Positives = 47/90 (52%)
Frame = +3
Query: 510 LTTMLVSGS*LSGPVPEDLGSLQHPYRIHAGSNRLGSRAGSNMEFLSSLSNCTNLEVLSV 689
L+ + +S + +G VP LGSL + + + G N LGS ++ FL L N T LE+ +
Sbjct: 32 LSNVELSDNFFTGKVPA-LGSLPYLWHLSIGYNDLGSGQDDDLSFLYPLENNTVLEIFEI 90
Query: 690 CGNVP*GSIPKSMGIFFSTVENIDIENNTI 779
GN G +P+++G F + + N I
Sbjct: 91 AGNHLGGVLPETLGNFSKNLRMMGFGRNQI 120
Score = 45.1 bits (105), Expect(2) = 3e-10
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Frame = +1
Query: 781 LGNLIGLIYFGVADNLITGNIPNILGR---LGY----RNRLTVQISSYIGKXXXXXXXXX 939
+GNLI L+ G+ N ++G IP+ +G+ LGY +N+++ I S +G
Sbjct: 128 IGNLISLVALGLESNQLSGMIPSSIGKLQNLGYLYLDQNKISGSIPSSVGNMTSLIAAHL 187
Query: 940 XXXXXYGIIHSNLSKCQNWL 999
+G I SNL CQN L
Sbjct: 188 ELNSLHGSIPSNLGNCQNLL 207
>ref|XP_003545235.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At3g47570-like [Glycine max]
Length = 952
Score = 59.7 bits (143), Expect(2) = 7e-10
Identities = 32/85 (37%), Positives = 47/85 (55%)
Frame = +3
Query: 525 VSGS*LSGPVPEDLGSLQHPYRIHAGSNRLGSRAGSNMEFLSSLSNCTNLEVLSVCGNVP 704
+S + SG +P LGSL R H N GS +++FLSSL+NCT L +L + GN
Sbjct: 258 ISSNGFSGSIPPTLGSLNKLKRFHIAYNSFGSGRAQDLDFLSSLTNCTRLNILILEGNQF 317
Query: 705 *GSIPKSMGIFFSTVENIDIENNTI 779
G +P +G F + + +D+ N I
Sbjct: 318 GGVLPDLIGNFSANLTLLDMGKNQI 342
Score = 30.8 bits (68), Expect(2) = 7e-10
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 781 LGNLIGLIYFGVADNLITGNIPNILGRLGYRNRLTVQISSYIG 909
+G LIGL F + DN + G IP +G L R +Q ++ G
Sbjct: 350 IGKLIGLTEFIMGDNYLEGTIPGSIGNLKNLVRFVLQGNNLSG 392
>ref|XP_002877545.1| hypothetical protein ARALYDRAFT_347816 [Arabidopsis lyrata subsp.
lyrata] gi|297323383|gb|EFH53804.1| hypothetical protein
ARALYDRAFT_347816 [Arabidopsis lyrata subsp. lyrata]
Length = 1013
Score = 48.1 bits (113), Expect(2) = 1e-09
Identities = 24/81 (29%), Positives = 49/81 (60%)
Frame = +3
Query: 540 LSGPVPEDLGSLQHPYRIHAGSNRLGSRAGSNMEFLSSLSNCTNLEVLSVCGNVP*GSIP 719
++G + + G LQ+ + + +N LGS + ++EFL +L+NC++L LSV N G++P
Sbjct: 299 MTGSISPNFGKLQNLHYLELANNSLGSYSFGDLEFLDALTNCSHLHGLSVSYNRLGGALP 358
Query: 720 KSMGIFFSTVENIDIENNTIF 782
S+ + + ++++ N I+
Sbjct: 359 TSIVNMSAELTVLNLKGNLIY 379
Score = 42.0 bits (97), Expect(2) = 1e-09
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 13/103 (12%)
Frame = +1
Query: 769 IIQYLGNLIGLIYFGVADNLITGNIPNILGRLG-------YRNRLTVQISSYIGKXXXXX 927
I Q + NLIGL +ADNL+TG +P LG+L + NR++ +I S+IG
Sbjct: 382 IPQDIENLIGLQSLLLADNLLTGPLPTSLGKLVGLGELILFSNRISGEIPSFIGNVTQLV 441
Query: 928 XXXXXXXXXYGIIHSNLSKCQNWL------HRIQMSLPAEVRE 1038
G++ +L C + L +++ +P E+ +
Sbjct: 442 KLNLSNNSFEGMVPPSLGDCSHMLDLQIGYNKLNGKIPKEIMQ 484