BLASTX nr result

ID: Coptis23_contig00003367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003367
         (1401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28942.3| unnamed protein product [Vitis vinifera]              402   e-109
ref|XP_002273713.1| PREDICTED: glutamate receptor 3.7 [Vitis vin...   402   e-109
ref|XP_002301626.1| glutamate-gated kainate-type ion channel rec...   387   e-105
ref|XP_002524180.1| glutamate receptor 3 plant, putative [Ricinu...   383   e-104
ref|XP_003540305.1| PREDICTED: glutamate receptor 3.7-like [Glyc...   377   e-102

>emb|CBI28942.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  402 bits (1032), Expect = e-109
 Identities = 205/342 (59%), Positives = 240/342 (70%), Gaps = 1/342 (0%)
 Frame = +1

Query: 112  LH*SKWSAWVFLKLFIV*IWCITEAFFXXXXXXXXXLEHRINDDFRGPPRRQIVTMFLFS 291
            +H +K SAWVFLK F V +WC+T A F         LEHR+NDDFRGPP+RQ++TMFLFS
Sbjct: 497  VHNTKLSAWVFLKPFTVEMWCVTAAAFVMIAVVIWILEHRVNDDFRGPPKRQLITMFLFS 556

Query: 292  FSTLFKTNQEDTVSTLGRXXXXXXXXXXXXXTSSYTASLTSILTVEQLSSPITGIDSLIA 471
            FSTLFKTNQEDT STLGR             TSSYTASLTSILTV+QLSSPITGIDSLIA
Sbjct: 557  FSTLFKTNQEDTRSTLGRIVMVVWLFLLMVITSSYTASLTSILTVQQLSSPITGIDSLIA 616

Query: 472  SNQPIGCQNGSFVKGYLTESLNIRSSRIVSLSNIGEYAKALQRGPNNGGVAAVVDELPYI 651
            S+ PIG Q GSF   YL +SL +  SR+VSL +   Y  AL++GP  GGVAA+VDELPY+
Sbjct: 617  SDLPIGYQVGSFAFSYLRDSLYVHQSRLVSLGSPEAYEMALRKGPKGGGVAAIVDELPYV 676

Query: 652  ELFLSKYTEFGMVGQMFTKSGWGFAFKRSSPLTLDFSTAILKLVETGELEKIRKDWFCKS 831
            ELFL K  +FG+ GQ FTKSGWGFAF++ SPL  D STAIL+L ETG L+KI ++WFCK 
Sbjct: 677  ELFLEKQKDFGVFGQTFTKSGWGFAFQKDSPLAADLSTAILRLSETGTLQKIHENWFCKM 736

Query: 832  GCAAERTHHSNPKQLHLSSFWGLFLLCXXXXXXXXXXXXXXXXXQFVRYK-KKQRNLSPS 1008
            GC   R   S P QLH+ SFWGL+LLC                 QF RYK KK   +  S
Sbjct: 737  GCPGWRRRKSEPNQLHMISFWGLYLLCGSITLIALLVFLLRTIRQFARYKRKKPIQIGDS 796

Query: 1009 PSSETNISCSQVCYNFFDFIDEKEEAVKRMFKQSDSAQEQVN 1134
            PS  +N  CSQV YNFFDFIDEKEEA+K+MFKQ ++ Q QV+
Sbjct: 797  PSVSSNTRCSQVIYNFFDFIDEKEEAIKKMFKQQENPQPQVS 838


>ref|XP_002273713.1| PREDICTED: glutamate receptor 3.7 [Vitis vinifera]
          Length = 909

 Score =  402 bits (1032), Expect = e-109
 Identities = 205/342 (59%), Positives = 240/342 (70%), Gaps = 1/342 (0%)
 Frame = +1

Query: 112  LH*SKWSAWVFLKLFIV*IWCITEAFFXXXXXXXXXLEHRINDDFRGPPRRQIVTMFLFS 291
            +H +K SAWVFLK F V +WC+T A F         LEHR+NDDFRGPP+RQ++TMFLFS
Sbjct: 568  VHNTKLSAWVFLKPFTVEMWCVTAAAFVMIAVVIWILEHRVNDDFRGPPKRQLITMFLFS 627

Query: 292  FSTLFKTNQEDTVSTLGRXXXXXXXXXXXXXTSSYTASLTSILTVEQLSSPITGIDSLIA 471
            FSTLFKTNQEDT STLGR             TSSYTASLTSILTV+QLSSPITGIDSLIA
Sbjct: 628  FSTLFKTNQEDTRSTLGRIVMVVWLFLLMVITSSYTASLTSILTVQQLSSPITGIDSLIA 687

Query: 472  SNQPIGCQNGSFVKGYLTESLNIRSSRIVSLSNIGEYAKALQRGPNNGGVAAVVDELPYI 651
            S+ PIG Q GSF   YL +SL +  SR+VSL +   Y  AL++GP  GGVAA+VDELPY+
Sbjct: 688  SDLPIGYQVGSFAFSYLRDSLYVHQSRLVSLGSPEAYEMALRKGPKGGGVAAIVDELPYV 747

Query: 652  ELFLSKYTEFGMVGQMFTKSGWGFAFKRSSPLTLDFSTAILKLVETGELEKIRKDWFCKS 831
            ELFL K  +FG+ GQ FTKSGWGFAF++ SPL  D STAIL+L ETG L+KI ++WFCK 
Sbjct: 748  ELFLEKQKDFGVFGQTFTKSGWGFAFQKDSPLAADLSTAILRLSETGTLQKIHENWFCKM 807

Query: 832  GCAAERTHHSNPKQLHLSSFWGLFLLCXXXXXXXXXXXXXXXXXQFVRYK-KKQRNLSPS 1008
            GC   R   S P QLH+ SFWGL+LLC                 QF RYK KK   +  S
Sbjct: 808  GCPGWRRRKSEPNQLHMISFWGLYLLCGSITLIALLVFLLRTIRQFARYKRKKPIQIGDS 867

Query: 1009 PSSETNISCSQVCYNFFDFIDEKEEAVKRMFKQSDSAQEQVN 1134
            PS  +N  CSQV YNFFDFIDEKEEA+K+MFKQ ++ Q QV+
Sbjct: 868  PSVSSNTRCSQVIYNFFDFIDEKEEAIKKMFKQQENPQPQVS 909


>ref|XP_002301626.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222843352|gb|EEE80899.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 861

 Score =  387 bits (995), Expect = e-105
 Identities = 194/338 (57%), Positives = 234/338 (69%)
 Frame = +1

Query: 121  SKWSAWVFLKLFIV*IWCITEAFFXXXXXXXXXLEHRINDDFRGPPRRQIVTMFLFSFST 300
            SK SAWVFLK F   +WC+T A F         LEHR+NDDFRGPPRRQ+VTMF+FSFST
Sbjct: 523  SKSSAWVFLKPFTAEMWCVTAASFVVIAVVIWVLEHRVNDDFRGPPRRQLVTMFMFSFST 582

Query: 301  LFKTNQEDTVSTLGRXXXXXXXXXXXXXTSSYTASLTSILTVEQLSSPITGIDSLIASNQ 480
            LFKTN+E TVS LG+             T+SYTASLTSILT++QLSSPITGI+SLIAS+ 
Sbjct: 583  LFKTNKETTVSPLGKLVMVVWLFLLMVITASYTASLTSILTIQQLSSPITGIESLIASHW 642

Query: 481  PIGCQNGSFVKGYLTESLNIRSSRIVSLSNIGEYAKALQRGPNNGGVAAVVDELPYIELF 660
            PIG Q GSF   YL+E+L I  SR+V L +  EY  AL+RGP++GGVAA+VDELPY+ELF
Sbjct: 643  PIGYQTGSFAYNYLSETLYIARSRLVPLGSPEEYESALRRGPSDGGVAAIVDELPYVELF 702

Query: 661  LSKYTEFGMVGQMFTKSGWGFAFKRSSPLTLDFSTAILKLVETGELEKIRKDWFCKSGCA 840
            LS   +FG++GQ FT+ GWGFAF+R SPL LD STAILKL E GEL+KI + WFCK GC 
Sbjct: 703  LSSQKDFGIIGQPFTRGGWGFAFQRESPLALDISTAILKLSENGELQKIYEKWFCKMGCH 762

Query: 841  AERTHHSNPKQLHLSSFWGLFLLCXXXXXXXXXXXXXXXXXQFVRYKKKQRNLSPSPSSE 1020
             E+ H   P QL L+SFWGL++LC                 QFVRYK++Q   S   S  
Sbjct: 763  GEKKHGDGPNQLKLTSFWGLYILCGAFALTALVVFLLRMVRQFVRYKRRQLRCSSPSSIS 822

Query: 1021 TNISCSQVCYNFFDFIDEKEEAVKRMFKQSDSAQEQVN 1134
             +  CS V Y+FFDFIDE+EEA+K+MF Q +    Q N
Sbjct: 823  PSTRCSHVIYHFFDFIDEREEAIKKMFNQREHPHPQAN 860


>ref|XP_002524180.1| glutamate receptor 3 plant, putative [Ricinus communis]
            gi|223536549|gb|EEF38195.1| glutamate receptor 3 plant,
            putative [Ricinus communis]
          Length = 921

 Score =  383 bits (983), Expect = e-104
 Identities = 200/339 (58%), Positives = 232/339 (68%), Gaps = 1/339 (0%)
 Frame = +1

Query: 121  SKWSAWVFLKLFIV*IWCITEAFFXXXXXXXXXLEHRINDDFRGPPRRQIVTMFLFSFST 300
            SK SAWVFLK F V +WC+T A F         LEHR+ND+FRGPPRRQIVTMF+FSFST
Sbjct: 579  SKSSAWVFLKPFTVEMWCVTAASFLMIAVVIWILEHRVNDEFRGPPRRQIVTMFMFSFST 638

Query: 301  LFKTNQEDTVSTLGRXXXXXXXXXXXXXTSSYTASLTSILTVEQLSSPITGIDSLIASNQ 480
            LFKTNQE T+S L R             T+SYTASLTSILTVEQLSSPITGIDSLIAS  
Sbjct: 639  LFKTNQETTISPLARMVMVVWLFVLMVITASYTASLTSILTVEQLSSPITGIDSLIASKW 698

Query: 481  PIGCQNGSFVKGYLTESLNIRSSRIVSLSNIGEYAKALQRGPNN-GGVAAVVDELPYIEL 657
            PIG Q GSF   YL ESL I  SR+V L    EY +AL+ GP N GGVAAVVDELPY+EL
Sbjct: 699  PIGYQVGSFAYEYLYESLYISRSRLVPLGTPEEYERALRLGPQNVGGVAAVVDELPYVEL 758

Query: 658  FLSKYTEFGMVGQMFTKSGWGFAFKRSSPLTLDFSTAILKLVETGELEKIRKDWFCKSGC 837
            FL+K+ +FG++GQ FT+ GWGFAF+R SPL LD STAILKL ETG L+KI + WFCK GC
Sbjct: 759  FLAKHGDFGIIGQPFTRGGWGFAFQRDSPLALDMSTAILKLSETGVLQKIHEKWFCKKGC 818

Query: 838  AAERTHHSNPKQLHLSSFWGLFLLCXXXXXXXXXXXXXXXXXQFVRYKKKQRNLSPSPSS 1017
            A E+   S P QL L SFWGL+LLC                 QFV YK++Q    P    
Sbjct: 819  AGEKRQKSEPNQLRLISFWGLYLLCGGVTLAALLLFLLRAVRQFVHYKRRQMQQVPPSVI 878

Query: 1018 ETNISCSQVCYNFFDFIDEKEEAVKRMFKQSDSAQEQVN 1134
             +   CSQ+ ++FFDFID+KEEA+K+MF Q D    QV+
Sbjct: 879  LSTTRCSQIIFHFFDFIDKKEEAIKKMFMQCDHPAPQVS 917


>ref|XP_003540305.1| PREDICTED: glutamate receptor 3.7-like [Glycine max]
          Length = 909

 Score =  377 bits (968), Expect = e-102
 Identities = 186/329 (56%), Positives = 232/329 (70%)
 Frame = +1

Query: 130  SAWVFLKLFIV*IWCITEAFFXXXXXXXXXLEHRINDDFRGPPRRQIVTMFLFSFSTLFK 309
            +AWVFL+ F   +WC T A F         LEHR+N+DFRGPP++QIVTM +FS STLFK
Sbjct: 576  NAWVFLQPFTADMWCATAASFLVVGVVIWILEHRVNNDFRGPPKKQIVTMLMFSLSTLFK 635

Query: 310  TNQEDTVSTLGRXXXXXXXXXXXXXTSSYTASLTSILTVEQLSSPITGIDSLIASNQPIG 489
             NQEDTVS+L +             T+SYTASLTSILTVEQLSSPITGIDSLIASN PIG
Sbjct: 636  KNQEDTVSSLSKMVMIVWLFLLMVITASYTASLTSILTVEQLSSPITGIDSLIASNWPIG 695

Query: 490  CQNGSFVKGYLTESLNIRSSRIVSLSNIGEYAKALQRGPNNGGVAAVVDELPYIELFLSK 669
             Q GSF   YLT++L +  SR++ L +  EYA ALQ+GP+ GGVAA++DELPY+ELFLS 
Sbjct: 696  YQVGSFAYNYLTDNLYVSKSRLIPLGSPEEYATALQKGPSGGGVAAIIDELPYVELFLSN 755

Query: 670  YTEFGMVGQMFTKSGWGFAFKRSSPLTLDFSTAILKLVETGELEKIRKDWFCKSGCAAER 849
             T+FG++GQ F +S WGFAF+R SPL  D STAILKL E G+L KI + WFCK GCA +R
Sbjct: 756  ETDFGIIGQPFARSSWGFAFQRESPLAYDMSTAILKLSENGDLRKIHEKWFCKMGCAEDR 815

Query: 850  THHSNPKQLHLSSFWGLFLLCXXXXXXXXXXXXXXXXXQFVRYKKKQRNLSPSPSSETNI 1029
            T +S P QLHL SFWGL+L C                 Q+ R+K++Q++++ S +  + I
Sbjct: 816  TSNSKPDQLHLISFWGLYLSCGIVLLVALALFLLLMIRQYARFKQRQKDVASSSTEPSGI 875

Query: 1030 SCSQVCYNFFDFIDEKEEAVKRMFKQSDS 1116
             CSQV  NFF+FIDEKEEA+K+MF Q D+
Sbjct: 876  HCSQVVVNFFNFIDEKEEAIKKMFTQCDN 904


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