BLASTX nr result
ID: Coptis23_contig00003366
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00003366
(1669 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002533875.1| DNA-directed RNA polymerase II, putative [Ri... 701 0.0
ref|XP_002285818.1| PREDICTED: uncharacterized protein LOC100260... 693 0.0
ref|XP_002302270.1| predicted protein [Populus trichocarpa] gi|2... 674 0.0
ref|XP_003544778.1| PREDICTED: uncharacterized protein LOC100776... 671 0.0
ref|XP_003544777.1| PREDICTED: uncharacterized protein LOC100776... 669 0.0
>ref|XP_002533875.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
gi|223526176|gb|EEF28506.1| DNA-directed RNA polymerase
II, putative [Ricinus communis]
Length = 478
Score = 701 bits (1809), Expect = 0.0
Identities = 349/478 (73%), Positives = 398/478 (83%), Gaps = 3/478 (0%)
Frame = -2
Query: 1641 MKRKSAKCSLCEKSNLASICALCVDSRLIEYKNSLKSLRNVRDSCYSRLTAQLVAKSKAD 1462
M +KS+ C++CE SN ASIC +CV+ RL EY LKSL++ RD YSRL+ LVAK KAD
Sbjct: 1 MNKKSSCCAICENSNRASICTVCVNYRLNEYSTLLKSLKSRRDLLYSRLSEVLVAKGKAD 60
Query: 1461 DQLSWRVHQNEKLSKLREKLNLTEKQLSQGKAKLDKMSIDLKFRYGLLESAMLTLKKNRV 1282
DQL+WRVHQNEKL+ LREKL +++QL Q KAK +KMS DL +YGLLES+ L+KNRV
Sbjct: 61 DQLNWRVHQNEKLANLREKLLRSKEQLIQAKAKTEKMSSDLNAKYGLLESSRSALEKNRV 120
Query: 1281 EQLEKFYPNLICTQSLGHMAITSERLHKQSVVIKQICKLFPQRRVVVDGDRKDGSNGQYD 1102
+QLEK++PNLICTQSLGHMAITSE LH SV +KQICKLFPQRRV+V+G++KDGS+GQYD
Sbjct: 121 DQLEKYFPNLICTQSLGHMAITSELLHNLSVTVKQICKLFPQRRVIVEGEKKDGSSGQYD 180
Query: 1101 QICNARLPRGLDPHSVPSEELAASLGYMVQLLNLVVKALAAPVLHNSGFAGSCSRIWQRD 922
QICNARLPRGLDPHS+PSEELAASLGYMVQLLNLVV LAAP LHNSGFAGSCSRIWQRD
Sbjct: 181 QICNARLPRGLDPHSIPSEELAASLGYMVQLLNLVVHNLAAPALHNSGFAGSCSRIWQRD 240
Query: 921 SYWNARPSSRSNEFPLFIPRQNSCTSGGENSWSDRSSSSFGVASMESEKKPSLDS--TGS 748
SYWNARPSSRSNE+PLFIPRQ C++ GENSW+DRSSS+FGVASMESE++ LDS + S
Sbjct: 241 SYWNARPSSRSNEYPLFIPRQRYCSTSGENSWTDRSSSNFGVASMESERRARLDSSRSSS 300
Query: 747 FNCNSASPHSVETHKDLQKGISLLKKSVACITAYCYNSLCLDAPSEASTFEAFAKLLGTL 568
FN NSASPHSVETHKDLQKGISL+KKSVAC+TAY YN LCLD P+EASTFEAFAKLL TL
Sbjct: 301 FNYNSASPHSVETHKDLQKGISLMKKSVACVTAYGYNLLCLDVPAEASTFEAFAKLLATL 360
Query: 567 SSSKEVRSVFSLKMASSRSCKQAQKLNK-XXXXXXXXXXXXXXXXXXXXXXLRNAGDNNL 391
SSSKEVRSVFSLKMA SRSCKQ QKLNK +N DNNL
Sbjct: 361 SSSKEVRSVFSLKMACSRSCKQVQKLNKSVWNVNSIISSSTLMESAHAPHLTKNINDNNL 420
Query: 390 SNSAVSFLYTNEMSDVGKSESLVEGWDLVEHPTFPPPPSQSEDIEHWTRAMFVDATKR 217
NSA SFL+ NE+SD GK+ESL++GWDLVEHPTFPPPPSQ+ED+EHWTRAMF+DATK+
Sbjct: 421 RNSATSFLFANEISDAGKNESLIDGWDLVEHPTFPPPPSQTEDVEHWTRAMFIDATKK 478
>ref|XP_002285818.1| PREDICTED: uncharacterized protein LOC100260778 [Vitis vinifera]
gi|302141899|emb|CBI19102.3| unnamed protein product
[Vitis vinifera]
Length = 478
Score = 693 bits (1789), Expect = 0.0
Identities = 351/478 (73%), Positives = 396/478 (82%), Gaps = 3/478 (0%)
Frame = -2
Query: 1641 MKRKSAKCSLCEKSNLASICALCVDSRLIEYKNSLKSLRNVRDSCYSRLTAQLVAKSKAD 1462
M RK++ CS+CEKSNLASICA+CV+ RL EY SLKS + RDS Y RL+ LVAK KAD
Sbjct: 1 MTRKTSSCSICEKSNLASICAVCVNYRLNEYNTSLKSSKGRRDSLYLRLSEVLVAKGKAD 60
Query: 1461 DQLSWRVHQNEKLSKLREKLNLTEKQLSQGKAKLDKMSIDLKFRYGLLESAMLTLKKNRV 1282
DQ++WRV QNEKL++LREKL ++Q GKAK++KMS DLK +YGLLESAM L+KNRV
Sbjct: 61 DQINWRVLQNEKLARLREKLRHRKEQYLDGKAKVEKMSNDLKLKYGLLESAMSMLEKNRV 120
Query: 1281 EQLEKFYPNLICTQSLGHMAITSERLHKQSVVIKQICKLFPQRRVVVDGDRKDGSNGQYD 1102
EQLEKFYPNLICTQ+LG MAITSER HKQSVVIKQICKLFPQRRV +DG++KDGS+ YD
Sbjct: 121 EQLEKFYPNLICTQNLGLMAITSERFHKQSVVIKQICKLFPQRRVNIDGEKKDGSSRPYD 180
Query: 1101 QICNARLPRGLDPHSVPSEELAASLGYMVQLLNLVVKALAAPVLHNSGFAGSCSRIWQRD 922
QICN RLPR LDPHSVPS+ELAASLGYMVQLLNLVV LAAP LHNSGFAGSCSRIWQR+
Sbjct: 181 QICNVRLPRVLDPHSVPSDELAASLGYMVQLLNLVVYNLAAPALHNSGFAGSCSRIWQRE 240
Query: 921 SYWNARPSSRSNEFPLFIPRQNSCTSGGENSWSDRSSSSFGVASMESEKKPSLDSTG--S 748
SYWN RPSSRSNE+PLFIPRQN C++ GENSWS+RSSS+FG+ASMES++KP L+S+G S
Sbjct: 241 SYWNPRPSSRSNEYPLFIPRQNLCSTNGENSWSERSSSNFGIASMESDRKPRLESSGSSS 300
Query: 747 FNCNSASPHSVETHKDLQKGISLLKKSVACITAYCYNSLCLDAPSEASTFEAFAKLLGTL 568
FN +SAS HSVETHKDLQKGISLLKKSVAC+T YCY+SLCLD P+EASTFEAFAKLL L
Sbjct: 301 FNYSSASLHSVETHKDLQKGISLLKKSVACLTTYCYSSLCLDVPTEASTFEAFAKLLAIL 360
Query: 567 SSSKEVRSVFSLKMASSRSCKQAQKLNK-XXXXXXXXXXXXXXXXXXXXXXLRNAGDNNL 391
SSSKEVRSVFSLKMA SRSCKQ Q+LNK RN DNNL
Sbjct: 361 SSSKEVRSVFSLKMACSRSCKQVQQLNKSIWNMNSAISSSTLLESAHTLPMTRNIFDNNL 420
Query: 390 SNSAVSFLYTNEMSDVGKSESLVEGWDLVEHPTFPPPPSQSEDIEHWTRAMFVDATKR 217
NSA SFLYT EMSD+GK+ESL+E WDLVEH FPPPPSQ+EDIEHWTRAM +DATK+
Sbjct: 421 PNSAASFLYTTEMSDIGKNESLIEEWDLVEHANFPPPPSQTEDIEHWTRAMIIDATKK 478
>ref|XP_002302270.1| predicted protein [Populus trichocarpa] gi|222843996|gb|EEE81543.1|
predicted protein [Populus trichocarpa]
Length = 475
Score = 674 bits (1738), Expect = 0.0
Identities = 342/478 (71%), Positives = 390/478 (81%), Gaps = 3/478 (0%)
Frame = -2
Query: 1641 MKRKSAKCSLCEKSNLASICALCVDSRLIEYKNSLKSLRNVRDSCYSRLTAQLVAKSKAD 1462
M +KS+ C++CE SN ASIC +CV+ RL EY LKSL + RDS YS+L+ L+AK KAD
Sbjct: 1 MNKKSSCCAICENSNRASICPICVNYRLNEYGTLLKSLNSRRDSLYSKLSVVLIAKGKAD 60
Query: 1461 DQLSWRVHQNEKLSKLREKLNLTEKQLSQGKAKLDKMSIDLKFRYGLLESAMLTLKKNRV 1282
DQ +WRV QNEKL+ REKL+ ++QL+QGKAK++K+S DLK + G+LESA L+KNR+
Sbjct: 61 DQFNWRVQQNEKLASSREKLHRNKEQLAQGKAKVEKLSQDLKKKNGMLESARNVLEKNRM 120
Query: 1281 EQLEKFYPNLICTQSLGHMAITSERLHKQSVVIKQICKLFPQRRVVVDGDRKDGSNGQYD 1102
EQLEKFYPNLICTQSLGHMAITSE LHKQSVVIKQICKLFPQRRV VDG+R +GQYD
Sbjct: 121 EQLEKFYPNLICTQSLGHMAITSELLHKQSVVIKQICKLFPQRRVNVDGER--NFSGQYD 178
Query: 1101 QICNARLPRGLDPHSVPSEELAASLGYMVQLLNLVVKALAAPVLHNSGFAGSCSRIWQRD 922
QICNARLPRGLDPHSV SEELAASLGYMVQLLNLV LAAP LHN+GFAGSCSRIWQRD
Sbjct: 179 QICNARLPRGLDPHSVSSEELAASLGYMVQLLNLVAHNLAAPTLHNAGFAGSCSRIWQRD 238
Query: 921 SYWNARPSSRSNEFPLFIPRQNSCTSGGENSWSDRSSSSFGVASMESEKKPSLDST--GS 748
SYWNA PSSRSNE+PLFIPRQN C++ ENSW+D+SSS+FGVASMESE++P LDST S
Sbjct: 239 SYWNACPSSRSNEYPLFIPRQNYCSTSSENSWTDKSSSNFGVASMESERRPHLDSTRSNS 298
Query: 747 FNCNSASPHSVETHKDLQKGISLLKKSVACITAYCYNSLCLDAPSEASTFEAFAKLLGTL 568
FN +S SPHSVETHKDLQKG+SLLKKSVAC+TAYCYN LCLD PS+ STFEAFAKLL TL
Sbjct: 299 FNYSSVSPHSVETHKDLQKGVSLLKKSVACVTAYCYNLLCLDVPSDTSTFEAFAKLLSTL 358
Query: 567 SSSKEVRSVFSLKMASSRSCKQAQKLNK-XXXXXXXXXXXXXXXXXXXXXXLRNAGDNNL 391
SSSKEVRSVF+LKMA SRSCKQ QKLNK ++N DNNL
Sbjct: 359 SSSKEVRSVFNLKMACSRSCKQVQKLNKSVWNVNSAISSSALLESAHALQLMKNTSDNNL 418
Query: 390 SNSAVSFLYTNEMSDVGKSESLVEGWDLVEHPTFPPPPSQSEDIEHWTRAMFVDATKR 217
NSA SFL+ +SD GK+ES ++GWDLVEHPTFPPPPSQ EDIEHWTRAMF+DATK+
Sbjct: 419 PNSAASFLFATGISD-GKNESFIDGWDLVEHPTFPPPPSQVEDIEHWTRAMFIDATKK 475
>ref|XP_003544778.1| PREDICTED: uncharacterized protein LOC100776426 isoform 2 [Glycine
max]
Length = 477
Score = 671 bits (1732), Expect = 0.0
Identities = 334/475 (70%), Positives = 395/475 (83%), Gaps = 3/475 (0%)
Frame = -2
Query: 1641 MKRKSAKCSLCEKSNLASICALCVDSRLIEYKNSLKSLRNVRDSCYSRLTAQLVAKSKAD 1462
M RK++ C++CE SN ASIC++CV+ RL EY SLK L++ RDS Y +L+ LV K K D
Sbjct: 1 MARKTSNCAICENSNQASICSICVNYRLNEYNTSLKLLKDRRDSLYLKLSEVLVRKGKGD 60
Query: 1461 DQLSWRVHQNEKLSKLREKLNLTEKQLSQGKAKLDKMSIDLKFRYGLLESAMLTLKKNRV 1282
DQ +WRV Q+EKL++L+EKL +++Q++QG+AK++ MS DLK +YGLLESA+ TL+KNRV
Sbjct: 61 DQANWRVLQHEKLARLKEKLRQSKEQVTQGRAKIETMSADLKLKYGLLESALSTLEKNRV 120
Query: 1281 EQLEKFYPNLICTQSLGHMAITSERLHKQSVVIKQICKLFPQRRVVVDGDRKDGSNGQYD 1102
EQLEKFYPNLICTQSLGH+AITSE LHK+SVVIKQICKLFPQRRVV++G+R+DG +GQYD
Sbjct: 121 EQLEKFYPNLICTQSLGHVAITSELLHKESVVIKQICKLFPQRRVVIEGERRDGCSGQYD 180
Query: 1101 QICNARLPRGLDPHSVPSEELAASLGYMVQLLNLVVKALAAPVLHNSGFAGSCSRIWQRD 922
QICNARLPR LDPHSVPSEEL+ SLGYMVQLLNLV+ LAAP LHNSGFAGSCSRIWQRD
Sbjct: 181 QICNARLPRALDPHSVPSEELSTSLGYMVQLLNLVIHNLAAPALHNSGFAGSCSRIWQRD 240
Query: 921 SYWNARPSSRSNEFPLFIPRQNSCTSGGENSWSDRSSSSFGVASMESEKKPSLDSTG--S 748
SYW+ARPSSRSNE+PLFIPRQN C++ GENSWS+RSSS+FGVAS+ESE++ LDS+G S
Sbjct: 241 SYWDARPSSRSNEYPLFIPRQNYCSTDGENSWSERSSSNFGVASVESERRHRLDSSGSTS 300
Query: 747 FNCNSASPHSVETHKDLQKGISLLKKSVACITAYCYNSLCLDAPSEASTFEAFAKLLGTL 568
FN + AS HSV+THKDLQKGISLLKKSV CITAYCYNSLCLD PSEASTFEAFAKLL TL
Sbjct: 301 FNYSLASSHSVQTHKDLQKGISLLKKSVVCITAYCYNSLCLDVPSEASTFEAFAKLLATL 360
Query: 567 SSSKEVRSVFSLKMASSRSCKQAQKLNK-XXXXXXXXXXXXXXXXXXXXXXLRNAGDNNL 391
+SSKEVRSVFSLKMA SR+CKQ Q+LNK +N +N L
Sbjct: 361 ASSKEVRSVFSLKMARSRTCKQVQQLNKSVWNMNSAISSTTLLESAHSVPTTKNLIENYL 420
Query: 390 SNSAVSFLYTNEMSDVGKSESLVEGWDLVEHPTFPPPPSQSEDIEHWTRAMFVDA 226
+S SFLY ++SD GK+E L+EGWD+VEHPTFPPPPSQSED+EHWTRAMF+DA
Sbjct: 421 PSSTGSFLYAADLSD-GKNECLIEGWDIVEHPTFPPPPSQSEDVEHWTRAMFIDA 474
>ref|XP_003544777.1| PREDICTED: uncharacterized protein LOC100776426 isoform 1 [Glycine
max]
Length = 475
Score = 669 bits (1727), Expect = 0.0
Identities = 333/474 (70%), Positives = 393/474 (82%), Gaps = 2/474 (0%)
Frame = -2
Query: 1641 MKRKSAKCSLCEKSNLASICALCVDSRLIEYKNSLKSLRNVRDSCYSRLTAQLVAKSKAD 1462
M RK++ C++CE SN ASIC++CV+ RL EY SLK L++ RDS Y +L+ LV K K D
Sbjct: 1 MARKTSNCAICENSNQASICSICVNYRLNEYNTSLKLLKDRRDSLYLKLSEVLVRKGKGD 60
Query: 1461 DQLSWRVHQNEKLSKLREKLNLTEKQLSQGKAKLDKMSIDLKFRYGLLESAMLTLKKNRV 1282
DQ +WRV Q+EKL++L+EKL +++Q++QG+AK++ MS DLK +YGLLESA+ TL+KNRV
Sbjct: 61 DQANWRVLQHEKLARLKEKLRQSKEQVTQGRAKIETMSADLKLKYGLLESALSTLEKNRV 120
Query: 1281 EQLEKFYPNLICTQSLGHMAITSERLHKQSVVIKQICKLFPQRRVVVDGDRKDGSNGQYD 1102
EQLEKFYPNLICTQSLGH+AITSE LHK+SVVIKQICKLFPQRRVV++G+R+DG +GQYD
Sbjct: 121 EQLEKFYPNLICTQSLGHVAITSELLHKESVVIKQICKLFPQRRVVIEGERRDGCSGQYD 180
Query: 1101 QICNARLPRGLDPHSVPSEELAASLGYMVQLLNLVVKALAAPVLHNSGFAGSCSRIWQRD 922
QICNARLPR LDPHSVPSEEL+ SLGYMVQLLNLV+ LAAP LHNSGFAGSCSRIWQRD
Sbjct: 181 QICNARLPRALDPHSVPSEELSTSLGYMVQLLNLVIHNLAAPALHNSGFAGSCSRIWQRD 240
Query: 921 SYWNARPSSRSNEFPLFIPRQNSCTSGGENSWSDRSSSSFGVASMESEKKPSLDSTG--S 748
SYW+ARPSSRSNE+PLFIPRQN C++ GENSWS+RSSS+FGVAS+ESE++ LDS+G S
Sbjct: 241 SYWDARPSSRSNEYPLFIPRQNYCSTDGENSWSERSSSNFGVASVESERRHRLDSSGSTS 300
Query: 747 FNCNSASPHSVETHKDLQKGISLLKKSVACITAYCYNSLCLDAPSEASTFEAFAKLLGTL 568
FN + AS HSV+THKDLQKGISLLKKSV CITAYCYNSLCLD PSEASTFEAFAKLL TL
Sbjct: 301 FNYSLASSHSVQTHKDLQKGISLLKKSVVCITAYCYNSLCLDVPSEASTFEAFAKLLATL 360
Query: 567 SSSKEVRSVFSLKMASSRSCKQAQKLNKXXXXXXXXXXXXXXXXXXXXXXLRNAGDNNLS 388
+SSKEVRSVFSLKMA SR+CKQ Q+LNK +N L
Sbjct: 361 ASSKEVRSVFSLKMARSRTCKQVQQLNKSVWNMNSAISSTTLLESAHSVPTTRI-ENYLP 419
Query: 387 NSAVSFLYTNEMSDVGKSESLVEGWDLVEHPTFPPPPSQSEDIEHWTRAMFVDA 226
+S SFLY ++SD GK+E L+EGWD+VEHPTFPPPPSQSED+EHWTRAMF+DA
Sbjct: 420 SSTGSFLYAADLSD-GKNECLIEGWDIVEHPTFPPPPSQSEDVEHWTRAMFIDA 472