BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003361
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528189.1| coatomer beta subunit, putative [Ricinus com...    41   6e-08
ref|XP_004149846.1| PREDICTED: coatomer subunit beta'-2-like [Cu...    41   7e-08
ref|NP_001189908.1| coatomer subunit beta'-3 [Arabidopsis thalia...    42   9e-08
ref|NP_188219.2| coatomer subunit beta'-3 [Arabidopsis thaliana]...    42   9e-08
ref|XP_002885121.1| hypothetical protein ARALYDRAFT_479052 [Arab...    42   9e-08

>ref|XP_002528189.1| coatomer beta subunit, putative [Ricinus communis]
           gi|223532401|gb|EEF34196.1| coatomer beta subunit,
           putative [Ricinus communis]
          Length = 914

 Score = 41.2 bits (95), Expect(2) = 6e-08
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = -3

Query: 188 EIATELQSESRWKQLGEFTTSIGKI 114
           EIATE+QSES+WKQLGE   S GK+
Sbjct: 660 EIATEVQSESKWKQLGELAISTGKL 684



 Score = 40.4 bits (93), Expect(2) = 6e-08
 Identities = 16/20 (80%), Positives = 19/20 (95%)
 Frame = -1

Query: 250 RGDIERANEILPTIPKEQHN 191
           RGD+ERANE+LP+IPKE HN
Sbjct: 601 RGDLERANELLPSIPKEHHN 620


>ref|XP_004149846.1| PREDICTED: coatomer subunit beta'-2-like [Cucumis sativus]
          Length = 915

 Score = 41.2 bits (95), Expect(2) = 7e-08
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = -3

Query: 188 EIATELQSESRWKQLGEFTTSIGKI 114
           EIA E+QSES+WKQLGE   SIGK+
Sbjct: 660 EIAVEVQSESKWKQLGELAMSIGKL 684



 Score = 40.0 bits (92), Expect(2) = 7e-08
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = -1

Query: 250 RGDIERANEILPTIPKEQHN 191
           RGD ERANEILP+IPKE HN
Sbjct: 601 RGDYERANEILPSIPKEHHN 620


>ref|NP_001189908.1| coatomer subunit beta'-3 [Arabidopsis thaliana]
           gi|332642238|gb|AEE75759.1| coatomer subunit beta'-3
           [Arabidopsis thaliana]
          Length = 930

 Score = 42.4 bits (98), Expect(2) = 9e-08
 Identities = 17/20 (85%), Positives = 20/20 (100%)
 Frame = -1

Query: 250 RGDIERANEILPTIPKEQHN 191
           RGD++RAN+ILPTIPKEQHN
Sbjct: 613 RGDLDRANQILPTIPKEQHN 632



 Score = 38.5 bits (88), Expect(2) = 9e-08
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = -3

Query: 188 EIATELQSESRWKQLGEFTTSIGKI 114
           EIA E+QSES+WKQLGE   S GK+
Sbjct: 672 EIAEEVQSESKWKQLGELAMSSGKL 696


>ref|NP_188219.2| coatomer subunit beta'-3 [Arabidopsis thaliana]
           gi|30683868|ref|NP_850593.1| coatomer subunit beta'-3
           [Arabidopsis thaliana] gi|222422950|dbj|BAH19460.1|
           AT3G15980 [Arabidopsis thaliana]
           gi|332642235|gb|AEE75756.1| coatomer subunit beta'-3
           [Arabidopsis thaliana] gi|332642236|gb|AEE75757.1|
           coatomer subunit beta'-3 [Arabidopsis thaliana]
          Length = 918

 Score = 42.4 bits (98), Expect(2) = 9e-08
 Identities = 17/20 (85%), Positives = 20/20 (100%)
 Frame = -1

Query: 250 RGDIERANEILPTIPKEQHN 191
           RGD++RAN+ILPTIPKEQHN
Sbjct: 601 RGDLDRANQILPTIPKEQHN 620



 Score = 38.5 bits (88), Expect(2) = 9e-08
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = -3

Query: 188 EIATELQSESRWKQLGEFTTSIGKI 114
           EIA E+QSES+WKQLGE   S GK+
Sbjct: 660 EIAEEVQSESKWKQLGELAMSSGKL 684


>ref|XP_002885121.1| hypothetical protein ARALYDRAFT_479052 [Arabidopsis lyrata subsp.
           lyrata] gi|297330961|gb|EFH61380.1| hypothetical protein
           ARALYDRAFT_479052 [Arabidopsis lyrata subsp. lyrata]
          Length = 918

 Score = 42.4 bits (98), Expect(2) = 9e-08
 Identities = 17/20 (85%), Positives = 20/20 (100%)
 Frame = -1

Query: 250 RGDIERANEILPTIPKEQHN 191
           RGD++RAN+ILPTIPKEQHN
Sbjct: 601 RGDLDRANQILPTIPKEQHN 620



 Score = 38.5 bits (88), Expect(2) = 9e-08
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = -3

Query: 188 EIATELQSESRWKQLGEFTTSIGKI 114
           EIA E+QSES+WKQLGE   S GK+
Sbjct: 660 EIAEEVQSESKWKQLGELAMSSGKL 684