BLASTX nr result

ID: Coptis23_contig00003360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003360
         (984 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21657.3| unnamed protein product [Vitis vinifera]              184   3e-44
ref|XP_002269083.1| PREDICTED: uncharacterized protein LOC100255...   184   3e-44
ref|XP_002327970.1| predicted protein [Populus trichocarpa] gi|2...   179   1e-42
gb|AAR95999.1| hypothetical protein [Musa acuminata]                  176   6e-42
ref|NP_001240139.1| uncharacterized protein LOC100815710 [Glycin...   174   4e-41

>emb|CBI21657.3| unnamed protein product [Vitis vinifera]
          Length = 259

 Score =  184 bits (467), Expect = 3e-44
 Identities = 96/188 (51%), Positives = 119/188 (63%)
 Frame = -2

Query: 839 KVRKTVYLDNLSPQVTSAVIKTALGQFGTVLNVQFIRNYNNKESKNTAQCALVEMETDKQ 660
           KV++ VY+DN+SPQVT AV+KTAL QFGTV+++ FI NY   E     +CALVEM    +
Sbjct: 75  KVKRAVYIDNISPQVTDAVLKTALNQFGTVVSIHFIPNY--VEPSKIPRCALVEMAKQSE 132

Query: 659 AKAIISEMKNYPFMMSGMPRPVRARDACAHMFVDRPRKPRRNKLQCKWVDPKDPDFEVAN 480
           A+AIIS+M NYPFMMSGMPRP RAR A   MF DRP KP R ++QC+W+D +DPDFEVA 
Sbjct: 133 AEAIISDMNNYPFMMSGMPRPARARPAEVEMFDDRPIKPGR-RIQCRWLDKEDPDFEVAK 191

Query: 479 KIKFLVRKHTXXXXXXXXXXXXXXXXXXXXXXXXLNVNYKKYEMIEKLQGDKVLGQLANR 300
           K+K LVRKH                         L  NYKKYEMI+ +  D    +LA  
Sbjct: 192 KLKHLVRKHASEASFMLKNQLEEEEKLAKQQAEVLKTNYKKYEMIDSVLADGAARRLARH 251

Query: 299 YRLRITDD 276
           Y   ++DD
Sbjct: 252 YNFNVSDD 259


>ref|XP_002269083.1| PREDICTED: uncharacterized protein LOC100255901 [Vitis vinifera]
          Length = 199

 Score =  184 bits (467), Expect = 3e-44
 Identities = 96/188 (51%), Positives = 119/188 (63%)
 Frame = -2

Query: 839 KVRKTVYLDNLSPQVTSAVIKTALGQFGTVLNVQFIRNYNNKESKNTAQCALVEMETDKQ 660
           KV++ VY+DN+SPQVT AV+KTAL QFGTV+++ FI NY   E     +CALVEM    +
Sbjct: 15  KVKRAVYIDNISPQVTDAVLKTALNQFGTVVSIHFIPNY--VEPSKIPRCALVEMAKQSE 72

Query: 659 AKAIISEMKNYPFMMSGMPRPVRARDACAHMFVDRPRKPRRNKLQCKWVDPKDPDFEVAN 480
           A+AIIS+M NYPFMMSGMPRP RAR A   MF DRP KP R ++QC+W+D +DPDFEVA 
Sbjct: 73  AEAIISDMNNYPFMMSGMPRPARARPAEVEMFDDRPIKPGR-RIQCRWLDKEDPDFEVAK 131

Query: 479 KIKFLVRKHTXXXXXXXXXXXXXXXXXXXXXXXXLNVNYKKYEMIEKLQGDKVLGQLANR 300
           K+K LVRKH                         L  NYKKYEMI+ +  D    +LA  
Sbjct: 132 KLKHLVRKHASEASFMLKNQLEEEEKLAKQQAEVLKTNYKKYEMIDSVLADGAARRLARH 191

Query: 299 YRLRITDD 276
           Y   ++DD
Sbjct: 192 YNFNVSDD 199


>ref|XP_002327970.1| predicted protein [Populus trichocarpa] gi|222837379|gb|EEE75758.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  179 bits (453), Expect = 1e-42
 Identities = 97/187 (51%), Positives = 120/187 (64%)
 Frame = -2

Query: 839 KVRKTVYLDNLSPQVTSAVIKTALGQFGTVLNVQFIRNYNNKESKNTAQCALVEMETDKQ 660
           KV++TVY+DNLSPQVT +V++TALGQFGTV NVQFI NY     KN   CALVEME  +Q
Sbjct: 17  KVKRTVYIDNLSPQVTESVMRTALGQFGTVKNVQFIPNYTGP--KNIPCCALVEMECLRQ 74

Query: 659 AKAIISEMKNYPFMMSGMPRPVRARDACAHMFVDRPRKPRRNKLQCKWVDPKDPDFEVAN 480
           A+A++SE+  +PFMMSGMPRP RA  A   MF DRP KP R ++QC+WVD KDPDFEVAN
Sbjct: 75  AEAVVSEITQFPFMMSGMPRPARAFRAEVEMFDDRPIKPGR-RIQCRWVDRKDPDFEVAN 133

Query: 479 KIKFLVRKHTXXXXXXXXXXXXXXXXXXXXXXXXLNVNYKKYEMIEKLQGDKVLGQLANR 300
           KIK +VRKH                         L  NYKK+ +I+ +  D     LA  
Sbjct: 134 KIKRVVRKHAAEDLFLLQQQLAQEEKLAKQQEETLKANYKKFTIIDNVVSDGTAPGLAKF 193

Query: 299 YRLRITD 279
           Y +++ D
Sbjct: 194 YNMKVFD 200


>gb|AAR95999.1| hypothetical protein [Musa acuminata]
          Length = 202

 Score =  176 bits (447), Expect = 6e-42
 Identities = 100/188 (53%), Positives = 116/188 (61%)
 Frame = -2

Query: 839 KVRKTVYLDNLSPQVTSAVIKTALGQFGTVLNVQFIRNYNNKESKNTAQCALVEMETDKQ 660
           KV +TV+LDNLS QVT+AVIK ALGQFG V+NV+FI NY         Q ALVEME +KQ
Sbjct: 18  KVSRTVFLDNLSTQVTTAVIKQALGQFGNVMNVEFIPNYTIPYP--IPQSALVEMENEKQ 75

Query: 659 AKAIISEMKNYPFMMSGMPRPVRARDACAHMFVDRPRKPRRNKLQCKWVDPKDPDFEVAN 480
           AKA+ISEM NYPFMMSGMPRPVRA+ A   MF DRP  P R K+Q +WVDP D DF VA 
Sbjct: 76  AKALISEMTNYPFMMSGMPRPVRAKPAKIEMFADRPPPPDR-KIQVRWVDPSDADFVVAK 134

Query: 479 KIKFLVRKHTXXXXXXXXXXXXXXXXXXXXXXXXLNVNYKKYEMIEKLQGDKVLGQLANR 300
           K+K L +KH                         L  NYKKYEMIE +  D    +LA  
Sbjct: 135 KLKQLCKKHNAEHLALIKHQLEEEEKLAKHQEEMLKTNYKKYEMIESIVQDGTTSRLARH 194

Query: 299 YRLRITDD 276
           Y +R+  D
Sbjct: 195 YGVRLDYD 202


>ref|NP_001240139.1| uncharacterized protein LOC100815710 [Glycine max]
           gi|255647517|gb|ACU24222.1| unknown [Glycine max]
          Length = 203

 Score =  174 bits (440), Expect = 4e-41
 Identities = 92/188 (48%), Positives = 119/188 (63%)
 Frame = -2

Query: 839 KVRKTVYLDNLSPQVTSAVIKTALGQFGTVLNVQFIRNYNNKESKNTAQCALVEMETDKQ 660
           KV +TVYLDN+SPQVT +VI+TAL QF TV NV+FI NY      N  QCALVE+++ K+
Sbjct: 14  KVSRTVYLDNMSPQVTESVIRTALDQFATVKNVKFIPNYIGPS--NQPQCALVELDSAKK 71

Query: 659 AKAIISEMKNYPFMMSGMPRPVRARDACAHMFVDRPRKPRRNKLQCKWVDPKDPDFEVAN 480
           AK I+S +  YPFMMSG PRPVRAR A   MF D+P KP R K++ +W++P DPDFE+A 
Sbjct: 72  AKEILSMIAGYPFMMSGQPRPVRARPAVMEMFDDQPIKPNR-KIKIRWLEPSDPDFELAK 130

Query: 479 KIKFLVRKHTXXXXXXXXXXXXXXXXXXXXXXXXLNVNYKKYEMIEKLQGDKVLGQLANR 300
           ++K L RKH                         L V+YKK++MIE +  DK   +LA +
Sbjct: 131 EVKNLTRKHAAEVEFLDKLLLEDEEKLAKQQEETLKVHYKKFKMIEGIMADKTAHRLARK 190

Query: 299 YRLRITDD 276
           Y L + DD
Sbjct: 191 YNLHVADD 198


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