BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003354
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39558.3| unnamed protein product [Vitis vinifera]              125   9e-27
ref|XP_002283093.1| PREDICTED: eukaryotic translation initiation...   125   9e-27
ref|XP_002319496.1| predicted protein [Populus trichocarpa] gi|2...   119   5e-25
ref|XP_002330181.1| predicted protein [Populus trichocarpa] gi|2...   118   1e-24
ref|XP_002512475.1| Eukaryotic translation initiation factor 3 s...   117   3e-24

>emb|CBI39558.3| unnamed protein product [Vitis vinifera]
          Length = 884

 Score =  125 bits (313), Expect = 9e-27
 Identities = 77/146 (52%), Positives = 91/146 (62%), Gaps = 38/146 (26%)
 Frame = -1

Query: 326  RLLARKAIIEKLKEEQE-------------------------------------T*SIQR 258
            RLLARK+IIEK KEEQE                                     T  I R
Sbjct: 563  RLLARKSIIEKRKEEQERQLLEMEREEESKRLKLQKITEEAEQKRLASEYEQRKTQRILR 622

Query: 257  EVVQRELNDAQILLEEVVERSKMKGKKPVIKGE-VTRDALIELARAEQLRERQEIEKKLL 81
            E+ +REL +AQ LL+E  +RSK KGKKP+ +GE VT+ +L+ELA +EQLRERQE+EKKL 
Sbjct: 623  EIEERELEEAQALLQEAEKRSKKKGKKPIAEGEKVTKQSLMELALSEQLRERQEMEKKLQ 682

Query: 80   KLVKTMDYMERAKREEEIPLIEAAFQ 3
            KL KTMDY+ERAKREE  PLIEAAFQ
Sbjct: 683  KLAKTMDYLERAKREEAAPLIEAAFQ 708


>ref|XP_002283093.1| PREDICTED: eukaryotic translation initiation factor 3 subunit A
            [Vitis vinifera]
          Length = 977

 Score =  125 bits (313), Expect = 9e-27
 Identities = 77/146 (52%), Positives = 91/146 (62%), Gaps = 38/146 (26%)
 Frame = -1

Query: 326  RLLARKAIIEKLKEEQE-------------------------------------T*SIQR 258
            RLLARK+IIEK KEEQE                                     T  I R
Sbjct: 563  RLLARKSIIEKRKEEQERQLLEMEREEESKRLKLQKITEEAEQKRLASEYEQRKTQRILR 622

Query: 257  EVVQRELNDAQILLEEVVERSKMKGKKPVIKGE-VTRDALIELARAEQLRERQEIEKKLL 81
            E+ +REL +AQ LL+E  +RSK KGKKP+ +GE VT+ +L+ELA +EQLRERQE+EKKL 
Sbjct: 623  EIEERELEEAQALLQEAEKRSKKKGKKPIAEGEKVTKQSLMELALSEQLRERQEMEKKLQ 682

Query: 80   KLVKTMDYMERAKREEEIPLIEAAFQ 3
            KL KTMDY+ERAKREE  PLIEAAFQ
Sbjct: 683  KLAKTMDYLERAKREEAAPLIEAAFQ 708


>ref|XP_002319496.1| predicted protein [Populus trichocarpa] gi|222857872|gb|EEE95419.1|
            predicted protein [Populus trichocarpa]
          Length = 994

 Score =  119 bits (298), Expect = 5e-25
 Identities = 75/152 (49%), Positives = 91/152 (59%), Gaps = 44/152 (28%)
 Frame = -1

Query: 326  RLLARKAIIEKLKEEQET*SIQ-------------------------------------- 261
            RLLARK+IIEK KEEQE   ++                                      
Sbjct: 563  RLLARKSIIEKRKEEQERQLLEMAGHLNYCLKEESRRLKQLKITEEAEQKRLATEYEQRN 622

Query: 260  -----REVVQRELNDAQILLEEVVERSKMKG-KKPVIKGEVTRDALIELARAEQLRERQE 99
                 RE+ +REL +AQ LLEE  +RSK KG KKP+++G+VT+  L+E A +EQLRERQE
Sbjct: 623  KQRILREIEERELEEAQALLEEQEKRSKRKGGKKPILEGKVTKQILMERALSEQLRERQE 682

Query: 98   IEKKLLKLVKTMDYMERAKREEEIPLIEAAFQ 3
            +EKKL KLVKTMDY+ERAKREE  PLIEAAFQ
Sbjct: 683  MEKKLQKLVKTMDYLERAKREEAAPLIEAAFQ 714


>ref|XP_002330181.1| predicted protein [Populus trichocarpa] gi|222871637|gb|EEF08768.1|
            predicted protein [Populus trichocarpa]
          Length = 972

 Score =  118 bits (295), Expect = 1e-24
 Identities = 76/147 (51%), Positives = 91/147 (61%), Gaps = 39/147 (26%)
 Frame = -1

Query: 326  RLLARKAIIEKLKEEQET*SIQ-------------------------------------R 258
            RLLARK+IIEK KEEQE   ++                                     R
Sbjct: 563  RLLARKSIIEKRKEEQERQLLEMEREEESRRLKQQKITEEAEQKRLAAEYEQRNKQRILR 622

Query: 257  EVVQRELNDAQILLEEVVERSKMKG-KKPVIKGE-VTRDALIELARAEQLRERQEIEKKL 84
            E+ +REL +AQ LLEE  +RSK KG KKP+++GE VT+  L+E A +EQLRERQE+EKKL
Sbjct: 623  EIEERELEEAQALLEEHEKRSKRKGGKKPILEGEKVTKQILMERALSEQLRERQEMEKKL 682

Query: 83   LKLVKTMDYMERAKREEEIPLIEAAFQ 3
             KLVKTMDY+ERAKREE  PLIEAAFQ
Sbjct: 683  QKLVKTMDYLERAKREEAAPLIEAAFQ 709


>ref|XP_002512475.1| Eukaryotic translation initiation factor 3 subunit, putative [Ricinus
            communis] gi|223548436|gb|EEF49927.1| Eukaryotic
            translation initiation factor 3 subunit, putative
            [Ricinus communis]
          Length = 994

 Score =  117 bits (292), Expect = 3e-24
 Identities = 74/147 (50%), Positives = 91/147 (61%), Gaps = 39/147 (26%)
 Frame = -1

Query: 326  RLLARKAIIEKLKEEQET*SIQ-------------------------------------R 258
            RLLARK+IIEK KEEQE   ++                                     +
Sbjct: 563  RLLARKSIIEKRKEEQERQLLELEREEESRRLQQQKKREEAEQKRLAAEIEQRKNQRILQ 622

Query: 257  EVVQRELNDAQILLEEVVERSKMKG-KKPVIKGE-VTRDALIELARAEQLRERQEIEKKL 84
            E+ QREL +AQ LLE+V +RSK KG KKP+++GE VT+  ++E A +EQLRERQE+EKKL
Sbjct: 623  EIEQRELEEAQALLEDVDKRSKRKGGKKPILEGEKVTKQTIMERALSEQLRERQEMEKKL 682

Query: 83   LKLVKTMDYMERAKREEEIPLIEAAFQ 3
             KL KTMDY+ERAKREE  PLIEAAFQ
Sbjct: 683  QKLAKTMDYLERAKREEAAPLIEAAFQ 709