BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003333
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531589.1| Eukaryotic translation initiation factor 3 s...    69   4e-10
ref|XP_003579937.1| PREDICTED: eukaryotic translation initiation...    68   7e-10
ref|XP_004159873.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic t...    67   2e-09
ref|XP_004146257.1| PREDICTED: eukaryotic translation initiation...    67   2e-09
ref|NP_001058804.1| Os07g0124500 [Oryza sativa Japonica Group] g...    67   2e-09

>ref|XP_002531589.1| Eukaryotic translation initiation factor 3 subunit, putative
           [Ricinus communis] gi|223528785|gb|EEF30792.1|
           Eukaryotic translation initiation factor 3 subunit,
           putative [Ricinus communis]
          Length = 619

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/67 (55%), Positives = 40/67 (59%)
 Frame = -2

Query: 201 YKPQEVYDAMRKLVEHTDGGXXXXXXXXXXXXXXXXHRAPPSFVVTPELVPRQPTFPESC 22
           YKPQEVYDAMRKL E TD                   R P +FV TPELVPR+PTFPES 
Sbjct: 433 YKPQEVYDAMRKLAEQTDDNEKSGVETKVEES-----RGPSAFVATPELVPRKPTFPESS 487

Query: 21  RMLMDEL 1
           R +MD L
Sbjct: 488 RTMMDLL 494


>ref|XP_003579937.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           C-like [Brachypodium distachyon]
          Length = 940

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 37/68 (54%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
 Frame = -2

Query: 201 YKPQEVYDAMRKLVEHTDGGXXXXXXXXXXXXXXXXH-RAPPSFVVTPELVPRQPTFPES 25
           YKPQEVYDAMRKL E T+ G                + R  P FVV PE+VPR+PTFPES
Sbjct: 441 YKPQEVYDAMRKLAEQTEAGIEDGDADTGDEYQAADNYRGTPPFVVIPEVVPRKPTFPES 500

Query: 24  CRMLMDEL 1
            R+LMD L
Sbjct: 501 GRVLMDGL 508


>ref|XP_004159873.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
           factor 3 subunit C-like [Cucumis sativus]
          Length = 939

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/69 (55%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
 Frame = -2

Query: 201 YKPQEVYDAMRKLVE--HTDGGXXXXXXXXXXXXXXXXHRAPPSFVVTPELVPRQPTFPE 28
           YKPQEVYDAMRKL E    DGG                 R P +F+VTPELVPR+PTFPE
Sbjct: 436 YKPQEVYDAMRKLAELSEDDGGDASDEAKVVEES-----RGPAAFIVTPELVPRKPTFPE 490

Query: 27  SCRMLMDEL 1
           S R  MD L
Sbjct: 491 SSRAFMDIL 499


>ref|XP_004146257.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           C-like [Cucumis sativus]
          Length = 939

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/69 (55%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
 Frame = -2

Query: 201 YKPQEVYDAMRKLVE--HTDGGXXXXXXXXXXXXXXXXHRAPPSFVVTPELVPRQPTFPE 28
           YKPQEVYDAMRKL E    DGG                 R P +F+VTPELVPR+PTFPE
Sbjct: 436 YKPQEVYDAMRKLAELSEDDGGDASDEAKVVEES-----RGPAAFIVTPELVPRKPTFPE 490

Query: 27  SCRMLMDEL 1
           S R  MD L
Sbjct: 491 SSRAFMDIL 499


>ref|NP_001058804.1| Os07g0124500 [Oryza sativa Japonica Group]
           gi|28201304|dbj|BAC56812.1| putative Eukaryotic
           translation initiation factor 3 subunit 8 [Oryza sativa
           Japonica Group] gi|113610340|dbj|BAF20718.1|
           Os07g0124500 [Oryza sativa Japonica Group]
           gi|215704847|dbj|BAG94875.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 936

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 37/68 (54%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
 Frame = -2

Query: 201 YKPQEVYDAMRKLVEHT-DGGXXXXXXXXXXXXXXXXHRAPPSFVVTPELVPRQPTFPES 25
           YKPQEVYDAMRKL E   D                  +R PP FVV PE+VPR+PTFPES
Sbjct: 440 YKPQEVYDAMRKLAEQDEDSREDDDADADEERQVVDDNRGPPPFVVIPEVVPRKPTFPES 499

Query: 24  CRMLMDEL 1
            R LMD L
Sbjct: 500 GRALMDAL 507