BLASTX nr result

ID: Coptis23_contig00003328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003328
         (937 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534367.1| PREDICTED: conserved oligomeric Golgi comple...   162   1e-37
ref|XP_003539975.1| PREDICTED: LOW QUALITY PROTEIN: conserved ol...   161   2e-37
ref|XP_002267657.1| PREDICTED: conserved oligomeric Golgi comple...   161   2e-37
emb|CAN76413.1| hypothetical protein VITISV_043812 [Vitis vinifera]   161   2e-37
ref|XP_002304412.1| predicted protein [Populus trichocarpa] gi|2...   160   4e-37

>ref|XP_003534367.1| PREDICTED: conserved oligomeric Golgi complex subunit 7-like
           [Glycine max]
          Length = 834

 Score =  162 bits (409), Expect = 1e-37
 Identities = 84/106 (79%), Positives = 97/106 (91%)
 Frame = -2

Query: 339 EFEMAEGTSGESIDALAKVDIVKQRMEAAYETLQDVAGLTQLSASVEDVFASGDLPQAAK 160
           + + AEG+S ESI ALAKVD+VKQRMEAAYETLQD AGLTQLSA+VEDVFASGDLP+AA+
Sbjct: 92  KLKKAEGSSAESIAALAKVDVVKQRMEAAYETLQDAAGLTQLSATVEDVFASGDLPRAAE 151

Query: 159 TLANMRHCLFAAVGEVAAFANVRKQLEVLEDRLEEMLQPHLSEALS 22
           TLANMRHCL +AVGEVA FAN+RKQLEVLEDRL+ M+QP L++ALS
Sbjct: 152 TLANMRHCL-SAVGEVAEFANIRKQLEVLEDRLDNMVQPRLTDALS 196


>ref|XP_003539975.1| PREDICTED: LOW QUALITY PROTEIN: conserved oligomeric Golgi complex
           subunit 7-like [Glycine max]
          Length = 834

 Score =  161 bits (407), Expect = 2e-37
 Identities = 84/106 (79%), Positives = 96/106 (90%)
 Frame = -2

Query: 339 EFEMAEGTSGESIDALAKVDIVKQRMEAAYETLQDVAGLTQLSASVEDVFASGDLPQAAK 160
           + + AEG+S ESI ALAKVD+VKQRMEAAYETLQD AGLTQLSA+VEDVFASGDLP+AA+
Sbjct: 92  KLKKAEGSSAESIAALAKVDVVKQRMEAAYETLQDAAGLTQLSATVEDVFASGDLPRAAE 151

Query: 159 TLANMRHCLFAAVGEVAAFANVRKQLEVLEDRLEEMLQPHLSEALS 22
           TLANMRHCL +AVGEVA FAN+RKQLEVLEDRL+ M+QP L +ALS
Sbjct: 152 TLANMRHCL-SAVGEVAEFANIRKQLEVLEDRLDNMVQPRLMDALS 196


>ref|XP_002267657.1| PREDICTED: conserved oligomeric Golgi complex subunit 7 [Vitis
           vinifera] gi|296084209|emb|CBI24597.3| unnamed protein
           product [Vitis vinifera]
          Length = 838

 Score =  161 bits (407), Expect = 2e-37
 Identities = 84/106 (79%), Positives = 97/106 (91%)
 Frame = -2

Query: 339 EFEMAEGTSGESIDALAKVDIVKQRMEAAYETLQDVAGLTQLSASVEDVFASGDLPQAAK 160
           + + AEG+S ESI ALAKVDIVKQRMEAAYETLQD AGLTQLS++VEDVFASGDLP+AA+
Sbjct: 92  KLKKAEGSSAESIAALAKVDIVKQRMEAAYETLQDAAGLTQLSSTVEDVFASGDLPKAAE 151

Query: 159 TLANMRHCLFAAVGEVAAFANVRKQLEVLEDRLEEMLQPHLSEALS 22
           TLANMRHCL +AVGEVA FAN+RKQLEVLEDRL+ M+QP L++ALS
Sbjct: 152 TLANMRHCL-SAVGEVAEFANIRKQLEVLEDRLDSMVQPRLTDALS 196


>emb|CAN76413.1| hypothetical protein VITISV_043812 [Vitis vinifera]
          Length = 444

 Score =  161 bits (407), Expect = 2e-37
 Identities = 84/106 (79%), Positives = 97/106 (91%)
 Frame = -2

Query: 339 EFEMAEGTSGESIDALAKVDIVKQRMEAAYETLQDVAGLTQLSASVEDVFASGDLPQAAK 160
           + + AEG+S ESI ALAKVDIVKQRMEAAYETLQD AGLTQLS++VEDVFASGDLP+AA+
Sbjct: 92  KLKKAEGSSAESIAALAKVDIVKQRMEAAYETLQDAAGLTQLSSTVEDVFASGDLPKAAE 151

Query: 159 TLANMRHCLFAAVGEVAAFANVRKQLEVLEDRLEEMLQPHLSEALS 22
           TLANMRHCL +AVGEVA FAN+RKQLEVLEDRL+ M+QP L++ALS
Sbjct: 152 TLANMRHCL-SAVGEVAEFANIRKQLEVLEDRLDSMVQPRLTDALS 196


>ref|XP_002304412.1| predicted protein [Populus trichocarpa] gi|222841844|gb|EEE79391.1|
           predicted protein [Populus trichocarpa]
          Length = 788

 Score =  160 bits (405), Expect = 4e-37
 Identities = 85/106 (80%), Positives = 95/106 (89%)
 Frame = -2

Query: 339 EFEMAEGTSGESIDALAKVDIVKQRMEAAYETLQDVAGLTQLSASVEDVFASGDLPQAAK 160
           + + AEGTS ESI ALAKVD VKQRMEAAYETLQD AGLTQLS++VEDVFASGDLP+AA+
Sbjct: 48  KLKKAEGTSAESIAALAKVDTVKQRMEAAYETLQDAAGLTQLSSTVEDVFASGDLPRAAE 107

Query: 159 TLANMRHCLFAAVGEVAAFANVRKQLEVLEDRLEEMLQPHLSEALS 22
           TLANMRHCL +AVGEVA FANVRKQLEVLEDRL+ M+QP L +ALS
Sbjct: 108 TLANMRHCL-SAVGEVAEFANVRKQLEVLEDRLDSMVQPRLMDALS 152


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