BLASTX nr result

ID: Coptis23_contig00003324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003324
         (999 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270507.1| PREDICTED: uncharacterized protein LOC100261...   127   3e-27
ref|XP_003529560.1| PREDICTED: uncharacterized protein LOC100776...   119   1e-24
ref|XP_003550346.1| PREDICTED: uncharacterized protein LOC100818...   118   2e-24
ref|XP_002516949.1| conserved hypothetical protein [Ricinus comm...   118   2e-24
gb|ABK92928.1| unknown [Populus trichocarpa]                          115   1e-23

>ref|XP_002270507.1| PREDICTED: uncharacterized protein LOC100261891 [Vitis vinifera]
           gi|296083344|emb|CBI22980.3| unnamed protein product
           [Vitis vinifera]
          Length = 143

 Score =  127 bits (320), Expect = 3e-27
 Identities = 80/151 (52%), Positives = 88/151 (58%), Gaps = 2/151 (1%)
 Frame = -3

Query: 799 MVGLSILLEAHKKSSTRVTKSPQVINKT--ITIKXXXXXXXXXXXXXXXXXXPAITFLES 626
           MVGLSI+LEA K  +    K+PQVINK   +T                     A TFL+ 
Sbjct: 1   MVGLSIVLEAQKGINK---KTPQVINKITMMTKPTPFPSPPARWNSHSPLLPAATTFLDE 57

Query: 625 CFLCKQRLLPGKDIYMYKGDRAFCSVECRCRQIFMDEESVGVSNRDDMNCSLAALKPTMX 446
           CFLCKQ+LLPGKDIYMYKGDRAFCSVECRCRQIFMDEE      RD  NCSLAA+KPT  
Sbjct: 58  CFLCKQKLLPGKDIYMYKGDRAFCSVECRCRQIFMDEEE--TVRRD--NCSLAAMKPT-S 112

Query: 445 XXXXXXXXXXXXSRHNHQRKGNRNRGSGFAY 353
                       S  +  RKG R R  GFAY
Sbjct: 113 ASSCPSSSSPSSSTSSRLRKGTRTRAGGFAY 143


>ref|XP_003529560.1| PREDICTED: uncharacterized protein LOC100776779 [Glycine max]
          Length = 135

 Score =  119 bits (297), Expect = 1e-24
 Identities = 68/144 (47%), Positives = 82/144 (56%)
 Frame = -3

Query: 799 MVGLSILLEAHKKSSTRVTKSPQVINKTITIKXXXXXXXXXXXXXXXXXXPAITFLESCF 620
           MVGLS++LEA K    +  K+PQVINKT  +                      TFL+ CF
Sbjct: 1   MVGLSVVLEAQKSCINK--KTPQVINKTSMMLSSIHNKPSPPLPQPSSLFQPPTFLDQCF 58

Query: 619 LCKQRLLPGKDIYMYKGDRAFCSVECRCRQIFMDEESVGVSNRDDMNCSLAALKPTMXXX 440
           LC +RLLPGKDIYMYKGDRAFCSV+CRC+QIF DEE      +    CSLAA++PT    
Sbjct: 59  LCGKRLLPGKDIYMYKGDRAFCSVDCRCKQIFTDEEEAIQKEK----CSLAAMRPT---- 110

Query: 439 XXXXXXXXXXSRHNHQRKGNRNRG 368
                     +  +H RKG RNRG
Sbjct: 111 ---SSSASTSTASHHHRKGTRNRG 131


>ref|XP_003550346.1| PREDICTED: uncharacterized protein LOC100818870 [Glycine max]
          Length = 133

 Score =  118 bits (296), Expect = 2e-24
 Identities = 70/146 (47%), Positives = 82/146 (56%)
 Frame = -3

Query: 799 MVGLSILLEAHKKSSTRVTKSPQVINKTITIKXXXXXXXXXXXXXXXXXXPAITFLESCF 620
           MVGLS++LEA K    +  K+PQVINKT  +                   P  TFL+ CF
Sbjct: 1   MVGLSVVLEAQKSCINK--KTPQVINKTTMLMLSSIHNKPSPQPSSLFQPP--TFLDQCF 56

Query: 619 LCKQRLLPGKDIYMYKGDRAFCSVECRCRQIFMDEESVGVSNRDDMNCSLAALKPTMXXX 440
           LC +RLLPGKDIYMYKGDRAFCSV+CRC+QIF DEE      +    CSLAA++PT    
Sbjct: 57  LCGKRLLPGKDIYMYKGDRAFCSVDCRCKQIFSDEEEAIQKEK----CSLAAMRPTSSSS 112

Query: 439 XXXXXXXXXXSRHNHQRKGNRNRGSG 362
                         H RKG RNRG G
Sbjct: 113 STSTA--------RHHRKGTRNRGGG 130


>ref|XP_002516949.1| conserved hypothetical protein [Ricinus communis]
           gi|223544037|gb|EEF45563.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 152

 Score =  118 bits (296), Expect = 2e-24
 Identities = 77/159 (48%), Positives = 85/159 (53%), Gaps = 10/159 (6%)
 Frame = -3

Query: 799 MVGLSILLEAHKK-----SSTRVTKSPQVINKT----ITIKXXXXXXXXXXXXXXXXXXP 647
           MVGLSILLEA +K     ++    K+PQVINK     + I                    
Sbjct: 1   MVGLSILLEAQQKQQVGFANNNKKKTPQVINKATLNMMMINKLPSPLPSSTSLSSLSSFK 60

Query: 646 AITFLESCFLCKQRLLPGKDIYMYKGDRAFCSVECRCRQIFMDEESVGVSNRDDMNCSLA 467
             TFLE CFLC Q+LLPGKDIYMYKGDRAFCSVECRCRQIF DEE          NCS A
Sbjct: 61  PPTFLEHCFLCGQKLLPGKDIYMYKGDRAFCSVECRCRQIFTDEE----ETLRKENCSFA 116

Query: 466 ALKPT-MXXXXXXXXXXXXXSRHNHQRKGNRNRGSGFAY 353
           A+KPT               SRH+   K  RNR  GFAY
Sbjct: 117 AMKPTSTSAATAPPSSSTSASRHS---KSTRNRAGGFAY 152


>gb|ABK92928.1| unknown [Populus trichocarpa]
          Length = 157

 Score =  115 bits (289), Expect = 1e-23
 Identities = 74/165 (44%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
 Frame = -3

Query: 799 MVGLSILLEAHKKSSTRVTKSPQVINKTITIKXXXXXXXXXXXXXXXXXXPAI------- 641
           MVGLSI+LEA K  S   +K+PQVINK   +                     +       
Sbjct: 1   MVGLSIVLEAQKSGSVN-SKTPQVINKATMMMMMISNKPSSGPPSFSSATAPLPSYRNCS 59

Query: 640 ----TFLESCFLCKQRLLPGKDIYMYKGDRAFCSVECRCRQIFMDEESVGVSNRDDMNCS 473
                FL+ CFLC Q+LLPGKDIYMYKGDRAFCSVECRCRQIFMDEE          NCS
Sbjct: 60  FPVPAFLQQCFLCGQKLLPGKDIYMYKGDRAFCSVECRCRQIFMDEE----ETMRKENCS 115

Query: 472 LAALKPT-----MXXXXXXXXXXXXXSRHNHQRKGNRNRGSGFAY 353
            +A+KPT                    RH   RK  RNR  GFAY
Sbjct: 116 FSAMKPTGSAAASSSSATKSTSTTPAYRH---RKTTRNRAGGFAY 157


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