BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003320
         (1794 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517575.1| cytochrome C oxidase, putative [Ricinus comm...   145   3e-32
dbj|BAF30480.1| cytochrome c oxidase subunit Vb [Pisum sativum]       145   3e-32
dbj|BAF30483.1| cytochrome c oxidase subunit Vb [Pisum sativum]       145   3e-32
gb|AFK44279.1| unknown [Lotus japonicus]                              145   4e-32
dbj|BAJ53249.1| JHL25H03.12 [Jatropha curcas]                         144   8e-32

>ref|XP_002517575.1| cytochrome C oxidase, putative [Ricinus communis]
            gi|223543207|gb|EEF44739.1| cytochrome C oxidase,
            putative [Ricinus communis]
          Length = 171

 Score =  145 bits (366), Expect = 3e-32
 Identities = 82/157 (52%), Positives = 96/157 (61%), Gaps = 11/157 (7%)
 Frame = -2

Query: 1721 MWRR-LSTKLRNLPASSS----------LLKPNNNSIRINNLQXXXXXXXXXXXSAPLFS 1575
            MWRR LS+ L+ L ASSS             P + S    +             +A    
Sbjct: 1    MWRRSLSSHLKTLAASSSSRTTSAAASRFASPKHRSFLSPSPSASIFQRYFTAEAAD--G 58

Query: 1574 VGKKMVEDFMPIATGHEKEELEAQILGRDLLEINHPVGPFGTKEAPAIVKSYYDKRIVGC 1395
              K+ VED MPIATGHE+EELEA++ GRD+LEINHPVGPFGTKEAPA+VKSYYDKR+VGC
Sbjct: 59   AVKRRVEDAMPIATGHEREELEAELQGRDILEINHPVGPFGTKEAPAVVKSYYDKRLVGC 118

Query: 1394 PXXXXXXXXXXXVWFWLDKGHAHVCPVCSQYFKLEVV 1284
            P           +WFWL KG  H CPVC+QYF LEVV
Sbjct: 119  P-GGEGEDEHDVIWFWLKKGKPHECPVCTQYFVLEVV 154


>dbj|BAF30480.1| cytochrome c oxidase subunit Vb [Pisum sativum]
          Length = 155

 Score =  145 bits (366), Expect = 3e-32
 Identities = 77/144 (53%), Positives = 97/144 (67%)
 Frame = -2

Query: 1715 RRLSTKLRNLPASSSLLKPNNNSIRINNLQXXXXXXXXXXXSAPLFSVGKKMVEDFMPIA 1536
            R +S++L+ L +SSS L+  + ++ ++ L                 +V KK VED +PIA
Sbjct: 4    RLISSQLKTLTSSSSPLRSPSPAVAVSLLSCHFSTQSDDS------TVVKKKVEDIVPIA 57

Query: 1535 TGHEKEELEAQILGRDLLEINHPVGPFGTKEAPAIVKSYYDKRIVGCPXXXXXXXXXXXV 1356
            TGHE+EEL+AQI GRD+LEI+HP GPFGTKEAPA+VKSYYDKRIVGCP           V
Sbjct: 58   TGHEREELQAQIEGRDILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCP-GGEGEDEHDVV 116

Query: 1355 WFWLDKGHAHVCPVCSQYFKLEVV 1284
            WFWL+K   H CPVC+QYF LEVV
Sbjct: 117  WFWLEKDKPHECPVCAQYFVLEVV 140


>dbj|BAF30483.1| cytochrome c oxidase subunit Vb [Pisum sativum]
          Length = 155

 Score =  145 bits (366), Expect = 3e-32
 Identities = 77/144 (53%), Positives = 97/144 (67%)
 Frame = -2

Query: 1715 RRLSTKLRNLPASSSLLKPNNNSIRINNLQXXXXXXXXXXXSAPLFSVGKKMVEDFMPIA 1536
            R +S++L+ L +SSS L+  + ++ ++ L                 +V KK VED +PIA
Sbjct: 4    RLISSQLKTLTSSSSPLRSPSPAVAVSLLSCLFSTQSDDS------TVVKKKVEDIVPIA 57

Query: 1535 TGHEKEELEAQILGRDLLEINHPVGPFGTKEAPAIVKSYYDKRIVGCPXXXXXXXXXXXV 1356
            TGHE+EEL+AQI GRD+LEI+HP GPFGTKEAPA+VKSYYDKRIVGCP           V
Sbjct: 58   TGHEREELQAQIEGRDILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCP-GGEGEDEHDVV 116

Query: 1355 WFWLDKGHAHVCPVCSQYFKLEVV 1284
            WFWL+K   H CPVC+QYF LEVV
Sbjct: 117  WFWLEKDKPHECPVCAQYFVLEVV 140


>gb|AFK44279.1| unknown [Lotus japonicus]
          Length = 153

 Score =  145 bits (365), Expect = 4e-32
 Identities = 69/95 (72%), Positives = 76/95 (80%)
 Frame = -2

Query: 1568 KKMVEDFMPIATGHEKEELEAQILGRDLLEINHPVGPFGTKEAPAIVKSYYDKRIVGCPX 1389
            KK VED MPIATGHE+EEL+A + GRD+LEINHPVGPFGTKEAPA+VKSYYDKRIVGCP 
Sbjct: 45   KKKVEDVMPIATGHEREELQANLEGRDILEINHPVGPFGTKEAPAVVKSYYDKRIVGCP- 103

Query: 1388 XXXXXXXXXXVWFWLDKGHAHVCPVCSQYFKLEVV 1284
                      VWFWL+KG  H CPVC+QYF LEVV
Sbjct: 104  GGEGEDEHDVVWFWLEKGKPHECPVCAQYFVLEVV 138


>dbj|BAJ53249.1| JHL25H03.12 [Jatropha curcas]
          Length = 165

 Score =  144 bits (363), Expect = 8e-32
 Identities = 83/152 (54%), Positives = 100/152 (65%), Gaps = 6/152 (3%)
 Frame = -2

Query: 1721 MWRR-LSTKLRNLP-----ASSSLLKPNNNSIRINNLQXXXXXXXXXXXSAPLFSVGKKM 1560
            MWRR +S++L+ L      A+++     N SI I+               A   SVGK+ 
Sbjct: 1    MWRRAVSSQLKTLASCRSAAAAARFASPNRSI-ISPSPSASLFHRYFNADAASGSVGKR- 58

Query: 1559 VEDFMPIATGHEKEELEAQILGRDLLEINHPVGPFGTKEAPAIVKSYYDKRIVGCPXXXX 1380
            VED MPIATG E+EELEA++ G+D+LEINHPVGPFGTKEAPA+VKSYYDKRIVGCP    
Sbjct: 59   VEDIMPIATGSEREELEAELQGKDILEINHPVGPFGTKEAPAVVKSYYDKRIVGCP-GGE 117

Query: 1379 XXXXXXXVWFWLDKGHAHVCPVCSQYFKLEVV 1284
                   VWFWL+KG  H CPVC+QYF LEVV
Sbjct: 118  GEDEHDVVWFWLEKGKPHECPVCTQYFVLEVV 149