BLASTX nr result

ID: Coptis23_contig00003311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003311
         (819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19786.3| unnamed protein product [Vitis vinifera]               68   3e-09
ref|XP_002280787.1| PREDICTED: vacuolar proton translocating ATP...    68   3e-09
ref|XP_002265086.1| PREDICTED: vacuolar proton translocating ATP...    65   2e-08
ref|XP_002307693.1| predicted protein [Populus trichocarpa] gi|2...    61   3e-07
ref|XP_001763380.1| predicted protein [Physcomitrella patens sub...    61   3e-07

>emb|CBI19786.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 31/41 (75%), Positives = 35/41 (85%)
 Frame = +1

Query: 697 IKRCGEMARKLRYFKDQMTKAGFSPSARSMIEVDIDLDDLE 819
           IKRCGEMARKLR+FK+QMTKAG SPS RS+   D +LDDLE
Sbjct: 54  IKRCGEMARKLRFFKEQMTKAGLSPSTRSVARADFNLDDLE 94


>ref|XP_002280787.1| PREDICTED: vacuolar proton translocating ATPase 100 kDa
           subunit-like [Vitis vinifera]
          Length = 872

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 31/41 (75%), Positives = 35/41 (85%)
 Frame = +1

Query: 697 IKRCGEMARKLRYFKDQMTKAGFSPSARSMIEVDIDLDDLE 819
           IKRCGEMARKLR+FK+QMTKAG SPS RS+   D +LDDLE
Sbjct: 118 IKRCGEMARKLRFFKEQMTKAGLSPSTRSVARADFNLDDLE 158


>ref|XP_002265086.1| PREDICTED: vacuolar proton translocating ATPase 100 kDa subunit
           [Vitis vinifera] gi|297744757|emb|CBI38019.3| unnamed
           protein product [Vitis vinifera]
          Length = 822

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 29/41 (70%), Positives = 36/41 (87%)
 Frame = +1

Query: 697 IKRCGEMARKLRYFKDQMTKAGFSPSARSMIEVDIDLDDLE 819
           IK+C EMARKLR+FK+QM+KAG SPSA+ M+  DID+DDLE
Sbjct: 68  IKKCAEMARKLRFFKEQMSKAGLSPSAKIMMRGDIDMDDLE 108


>ref|XP_002307693.1| predicted protein [Populus trichocarpa] gi|222857142|gb|EEE94689.1|
           predicted protein [Populus trichocarpa]
          Length = 817

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 29/41 (70%), Positives = 33/41 (80%)
 Frame = +1

Query: 697 IKRCGEMARKLRYFKDQMTKAGFSPSARSMIEVDIDLDDLE 819
           IKRC EMARKLR+FK+QM KAG SPS +S+   DIDLD LE
Sbjct: 63  IKRCAEMARKLRFFKEQMRKAGLSPSTKSLRSGDIDLDHLE 103


>ref|XP_001763380.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162685515|gb|EDQ71910.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 818

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 26/41 (63%), Positives = 34/41 (82%)
 Frame = +1

Query: 697 IKRCGEMARKLRYFKDQMTKAGFSPSARSMIEVDIDLDDLE 819
           +KRCGEMARKLRYF DQ+ KAG +P+ R M++  +DLD+LE
Sbjct: 54  VKRCGEMARKLRYFHDQIAKAGQTPAQRPMVDKSVDLDELE 94


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