BLASTX nr result

ID: Coptis23_contig00003305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003305
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170651.1| PREDICTED: mitochondrial import receptor sub...    85   9e-15
ref|XP_002272982.1| PREDICTED: mitochondrial import receptor sub...    82   6e-14
emb|CAN79350.1| hypothetical protein VITISV_006999 [Vitis vinifera]    79   6e-13
ref|XP_002528355.1| conserved hypothetical protein [Ricinus comm...    77   2e-12
gb|ABB55375.1| unknown [Solanum tuberosum]                             76   3e-12

>ref|XP_004170651.1| PREDICTED: mitochondrial import receptor subunit TOM22 homolog
           2-like [Cucumis sativus]
          Length = 103

 Score = 84.7 bits (208), Expect = 9e-15
 Identities = 49/95 (51%), Positives = 57/95 (60%), Gaps = 10/95 (10%)
 Frame = -1

Query: 535 MASRNNKE----------GVLAKISNTVSESPIVQRGKQTASDAGTVGWKLLRSTGKAAW 386
           MASR NK           G+L+++S +VS+S IV+R K TASDA  V  KLLRSTGKAAW
Sbjct: 1   MASRGNKRPSITNGDDNLGILSRVSRSVSDSQIVRRAKSTASDAAFVSKKLLRSTGKAAW 60

Query: 385 LAGXXXXXXXXXXXXTMDREQQFAETEQQSAHLLG 281
           +AG             MDREQQF E E Q A LLG
Sbjct: 61  IAGTTFLILVVPLIIEMDREQQFNELEMQQASLLG 95


>ref|XP_002272982.1| PREDICTED: mitochondrial import receptor subunit TOM22 homolog 2
           [Vitis vinifera] gi|297744210|emb|CBI37180.3| unnamed
           protein product [Vitis vinifera]
          Length = 100

 Score = 82.0 bits (201), Expect = 6e-14
 Identities = 43/83 (51%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
 Frame = -1

Query: 526 RNNK-EGVLAKISNTVSESPIVQRGKQTASDAGTVGWKLLRSTGKAAWLAGXXXXXXXXX 350
           RN K EG+L+++SN++S+SPI+ +G+Q ASDA  V  KL +STGKAAW+AG         
Sbjct: 13  RNPKNEGILSRVSNSISQSPILFQGRQAASDAAVVAKKLFKSTGKAAWIAGTTFLILVVP 72

Query: 349 XXXTMDREQQFAETEQQSAHLLG 281
               MDREQQ  E E Q A LLG
Sbjct: 73  LIIEMDREQQMNELEMQQASLLG 95


>emb|CAN79350.1| hypothetical protein VITISV_006999 [Vitis vinifera]
          Length = 95

 Score = 78.6 bits (192), Expect = 6e-13
 Identities = 40/90 (44%), Positives = 54/90 (60%)
 Frame = -1

Query: 550 LINQPMASRNNKEGVLAKISNTVSESPIVQRGKQTASDAGTVGWKLLRSTGKAAWLAGXX 371
           +  +P  S      +L+++SN++S+SPI+ +G+Q ASDA  V  KL +STGKAAW+AG  
Sbjct: 1   MATKPPHSSPTLRSILSRVSNSISQSPILFQGRQAASDAAVVAKKLFKSTGKAAWIAGTT 60

Query: 370 XXXXXXXXXXTMDREQQFAETEQQSAHLLG 281
                      MDREQQ  E E Q A LLG
Sbjct: 61  FLILVVPLIIEMDREQQMNELEMQQASLLG 90


>ref|XP_002528355.1| conserved hypothetical protein [Ricinus communis]
           gi|223532223|gb|EEF34027.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 100

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 41/89 (46%), Positives = 52/89 (58%)
 Frame = -1

Query: 547 INQPMASRNNKEGVLAKISNTVSESPIVQRGKQTASDAGTVGWKLLRSTGKAAWLAGXXX 368
           I +     ++ EG++AK + TVS+S IV   KQ A+DAG V  +L +STGKAAW+AG   
Sbjct: 4   IGKKRIGSSSDEGIVAKFTRTVSDSAIVNTAKQAANDAGYVAKRLAKSTGKAAWIAGTTF 63

Query: 367 XXXXXXXXXTMDREQQFAETEQQSAHLLG 281
                     MDREQQF E E Q   LLG
Sbjct: 64  LILVVPLIIEMDREQQFTELELQQQSLLG 92


>gb|ABB55375.1| unknown [Solanum tuberosum]
          Length = 103

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 37/78 (47%), Positives = 50/78 (64%)
 Frame = -1

Query: 514 EGVLAKISNTVSESPIVQRGKQTASDAGTVGWKLLRSTGKAAWLAGXXXXXXXXXXXXTM 335
           +G++++ S+++SESPIV +GK+ ASD   V  KL +STGKAAW+AG             M
Sbjct: 18  DGIISRFSSSISESPIVYQGKRAASDVAFVAKKLFKSTGKAAWIAGTTFLILVVPLIIEM 77

Query: 334 DREQQFAETEQQSAHLLG 281
           DR+ QF E E Q A LLG
Sbjct: 78  DRDAQFTELEMQQASLLG 95


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