BLASTX nr result

ID: Coptis23_contig00003298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003298
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306717.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
emb|CBI18237.3| unnamed protein product [Vitis vinifera]              108   3e-22
ref|XP_003634523.1| PREDICTED: uncharacterized protein LOC100854...   108   3e-22
ref|XP_002302161.1| predicted protein [Populus trichocarpa] gi|1...   105   4e-21
ref|XP_003556161.1| PREDICTED: uncharacterized protein LOC100776...   100   1e-19

>ref|XP_002306717.1| predicted protein [Populus trichocarpa] gi|222856166|gb|EEE93713.1|
           predicted protein [Populus trichocarpa]
          Length = 87

 Score =  109 bits (272), Expect = 3e-22
 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 8/81 (9%)
 Frame = -3

Query: 220 MEKSRSFPEYSASYSGGEFGFEDRSNSNNSYSFNGPKE--------TDPELKRKKRVASY 65
           MEKS+SFP+YS+S+SG EFGFEDRSNS   Y+FNGP +        +DPELKRKKR+ASY
Sbjct: 1   MEKSKSFPQYSSSFSG-EFGFEDRSNS---YNFNGPCQKGNGFATSSDPELKRKKRIASY 56

Query: 64  NVFTTEGKVKSSVRNSFKWIK 2
           NVFT EGK+KS+VRNSFKWIK
Sbjct: 57  NVFTMEGKLKSNVRNSFKWIK 77


>emb|CBI18237.3| unnamed protein product [Vitis vinifera]
          Length = 114

 Score =  108 bits (271), Expect = 3e-22
 Identities = 58/81 (71%), Positives = 64/81 (79%), Gaps = 8/81 (9%)
 Frame = -3

Query: 220 MEKSRSFPEYSASYSGGEFGFEDRSNSNNSYSFNGP--------KETDPELKRKKRVASY 65
           MEKSRSFPEYS+SY+G EFGF DRSNS   YSFNGP           DPELKRKKR+ASY
Sbjct: 1   MEKSRSFPEYSSSYAG-EFGFHDRSNS---YSFNGPCNKGSGFATSNDPELKRKKRIASY 56

Query: 64  NVFTTEGKVKSSVRNSFKWIK 2
           NVFT EGK+K+SVR+SFKWIK
Sbjct: 57  NVFTMEGKLKTSVRSSFKWIK 77


>ref|XP_003634523.1| PREDICTED: uncharacterized protein LOC100854843 [Vitis vinifera]
          Length = 87

 Score =  108 bits (271), Expect = 3e-22
 Identities = 58/81 (71%), Positives = 64/81 (79%), Gaps = 8/81 (9%)
 Frame = -3

Query: 220 MEKSRSFPEYSASYSGGEFGFEDRSNSNNSYSFNGP--------KETDPELKRKKRVASY 65
           MEKSRSFPEYS+SY+G EFGF DRSNS   YSFNGP           DPELKRKKR+ASY
Sbjct: 1   MEKSRSFPEYSSSYAG-EFGFHDRSNS---YSFNGPCNKGSGFATSNDPELKRKKRIASY 56

Query: 64  NVFTTEGKVKSSVRNSFKWIK 2
           NVFT EGK+K+SVR+SFKWIK
Sbjct: 57  NVFTMEGKLKTSVRSSFKWIK 77


>ref|XP_002302161.1| predicted protein [Populus trichocarpa] gi|118482032|gb|ABK92947.1|
           unknown [Populus trichocarpa]
           gi|222843887|gb|EEE81434.1| predicted protein [Populus
           trichocarpa]
          Length = 87

 Score =  105 bits (262), Expect = 4e-21
 Identities = 55/81 (67%), Positives = 65/81 (80%), Gaps = 8/81 (9%)
 Frame = -3

Query: 220 MEKSRSFPEYSASYSGGEFGFEDRSNSNNSYSFNGPKE--------TDPELKRKKRVASY 65
           MEKS+SFP+YS+ +SG EFGFED+SNS   Y+FNGP +        +DPELKRKKR+ASY
Sbjct: 1   MEKSKSFPQYSSFFSG-EFGFEDQSNS---YNFNGPCQKGNGFATSSDPELKRKKRIASY 56

Query: 64  NVFTTEGKVKSSVRNSFKWIK 2
           NVFT EGK+KSS RNSFKWIK
Sbjct: 57  NVFTVEGKLKSSARNSFKWIK 77


>ref|XP_003556161.1| PREDICTED: uncharacterized protein LOC100776380 [Glycine max]
          Length = 86

 Score =  100 bits (249), Expect = 1e-19
 Identities = 52/81 (64%), Positives = 62/81 (76%), Gaps = 8/81 (9%)
 Frame = -3

Query: 220 MEKSRSFPEYSASYSGGEFGFEDRSNSNNSYSFNGPKE--------TDPELKRKKRVASY 65
           MEKS+SFPEYS SY+  EFGF +RSNS   Y+FNGP +        +DPELKRKKR+ +Y
Sbjct: 1   MEKSKSFPEYSCSYT--EFGFSERSNS---YNFNGPNQKGNGFSASSDPELKRKKRIKAY 55

Query: 64  NVFTTEGKVKSSVRNSFKWIK 2
           NV T EGK+K+SVRNSFKWIK
Sbjct: 56  NVLTVEGKLKTSVRNSFKWIK 76


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