BLASTX nr result
ID: Coptis23_contig00003289
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00003289
(251 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCO66297.1| polyubiquitin [Bathycoccus prasinos] 162 3e-38
ref|XP_003608276.1| Ubiquitin [Medicago truncatula] gi|355509331... 162 3e-38
gb|AAC35858.1| polyubiquitin [Capsicum chinense] 162 3e-38
ref|NP_001148453.1| LOC100282068 [Zea mays] gi|224059606|ref|XP_... 162 3e-38
ref|NP_001174480.1| Os05g0504766 [Oryza sativa Japonica Group] g... 162 3e-38
>emb|CCO66297.1| polyubiquitin [Bathycoccus prasinos]
Length = 359
Score = 162 bits (410), Expect = 3e-38
Identities = 82/83 (98%), Positives = 82/83 (98%)
Frame = +2
Query: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 181
IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI
Sbjct: 157 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 216
Query: 182 TLEVESSDTIDNVKAKFQDKEGI 250
TLEVESSDTIDNVKAK QDKEGI
Sbjct: 217 TLEVESSDTIDNVKAKIQDKEGI 239
Score = 162 bits (410), Expect = 3e-38
Identities = 82/83 (98%), Positives = 82/83 (98%)
Frame = +2
Query: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 181
IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI
Sbjct: 233 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 292
Query: 182 TLEVESSDTIDNVKAKFQDKEGI 250
TLEVESSDTIDNVKAK QDKEGI
Sbjct: 293 TLEVESSDTIDNVKAKIQDKEGI 315
Score = 152 bits (385), Expect = 2e-35
Identities = 77/78 (98%), Positives = 77/78 (98%)
Frame = +2
Query: 17 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 196
GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE
Sbjct: 86 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE 145
Query: 197 SSDTIDNVKAKFQDKEGI 250
SSDTIDNVKAK QDKEGI
Sbjct: 146 SSDTIDNVKAKIQDKEGI 163
Score = 97.1 bits (240), Expect = 1e-18
Identities = 47/47 (100%), Positives = 47/47 (100%)
Frame = +2
Query: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 142
IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct: 309 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 355
Score = 68.6 bits (166), Expect = 5e-10
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = +2
Query: 143 MQIFVKTLTGKTITLEVESSDTIDNVKAKFQDKEG 247
MQIFVKTLTGKTITLEVESSDTIDNVKAK QDKEG
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG 35
>ref|XP_003608276.1| Ubiquitin [Medicago truncatula] gi|355509331|gb|AES90473.1|
Ubiquitin [Medicago truncatula]
Length = 533
Score = 162 bits (410), Expect = 3e-38
Identities = 82/83 (98%), Positives = 82/83 (98%)
Frame = +2
Query: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 181
IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI
Sbjct: 30 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 89
Query: 182 TLEVESSDTIDNVKAKFQDKEGI 250
TLEVESSDTIDNVKAK QDKEGI
Sbjct: 90 TLEVESSDTIDNVKAKIQDKEGI 112
Score = 162 bits (410), Expect = 3e-38
Identities = 82/83 (98%), Positives = 82/83 (98%)
Frame = +2
Query: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 181
IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 165
Query: 182 TLEVESSDTIDNVKAKFQDKEGI 250
TLEVESSDTIDNVKAK QDKEGI
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGI 188
Score = 162 bits (410), Expect = 3e-38
Identities = 82/83 (98%), Positives = 82/83 (98%)
Frame = +2
Query: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 181
IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI
Sbjct: 182 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 241
Query: 182 TLEVESSDTIDNVKAKFQDKEGI 250
TLEVESSDTIDNVKAK QDKEGI
Sbjct: 242 TLEVESSDTIDNVKAKIQDKEGI 264
Score = 162 bits (410), Expect = 3e-38
Identities = 82/83 (98%), Positives = 82/83 (98%)
Frame = +2
Query: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 181
IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 469
Query: 182 TLEVESSDTIDNVKAKFQDKEGI 250
TLEVESSDTIDNVKAK QDKEGI
Sbjct: 470 TLEVESSDTIDNVKAKIQDKEGI 492
Score = 159 bits (403), Expect = 2e-37
Identities = 81/83 (97%), Positives = 81/83 (97%)
Frame = +2
Query: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 181
IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 317
Query: 182 TLEVESSDTIDNVKAKFQDKEGI 250
TLEVESSDTIDNVKAK DKEGI
Sbjct: 318 TLEVESSDTIDNVKAKILDKEGI 340
Score = 158 bits (400), Expect = 4e-37
Identities = 80/83 (96%), Positives = 81/83 (97%)
Frame = +2
Query: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 181
I DKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI
Sbjct: 334 ILDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 393
Query: 182 TLEVESSDTIDNVKAKFQDKEGI 250
TLEVESSDTIDNVKAK QDKEGI
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGI 416
Score = 97.1 bits (240), Expect = 1e-18
Identities = 47/47 (100%), Positives = 47/47 (100%)
Frame = +2
Query: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 142
IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct: 486 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532
Score = 70.1 bits (170), Expect = 2e-10
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +2
Query: 143 MQIFVKTLTGKTITLEVESSDTIDNVKAKFQDKEGI 250
MQIFVKTLTGKTITLEVESSDTIDNVKAK QDKEGI
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGI 36
>gb|AAC35858.1| polyubiquitin [Capsicum chinense]
Length = 265
Score = 162 bits (410), Expect = 3e-38
Identities = 82/83 (98%), Positives = 82/83 (98%)
Frame = +2
Query: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 181
IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI
Sbjct: 66 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 125
Query: 182 TLEVESSDTIDNVKAKFQDKEGI 250
TLEVESSDTIDNVKAK QDKEGI
Sbjct: 126 TLEVESSDTIDNVKAKIQDKEGI 148
Score = 160 bits (406), Expect = 8e-38
Identities = 81/83 (97%), Positives = 81/83 (97%)
Frame = +2
Query: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 181
IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI
Sbjct: 142 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 201
Query: 182 TLEVESSDTIDNVKAKFQDKEGI 250
TLEVESSDTIDNVK K QDKEGI
Sbjct: 202 TLEVESSDTIDNVKTKIQDKEGI 224
Score = 139 bits (350), Expect = 2e-31
Identities = 71/72 (98%), Positives = 71/72 (98%)
Frame = +2
Query: 35 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 214
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
Sbjct: 1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 60
Query: 215 NVKAKFQDKEGI 250
NVKAK QDKEGI
Sbjct: 61 NVKAKIQDKEGI 72
Score = 97.1 bits (240), Expect = 1e-18
Identities = 47/47 (100%), Positives = 47/47 (100%)
Frame = +2
Query: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 142
IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct: 218 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 264
>ref|NP_001148453.1| LOC100282068 [Zea mays] gi|224059606|ref|XP_002299930.1| predicted
protein [Populus trichocarpa]
gi|357474771|ref|XP_003607671.1| Ubiquitin [Medicago
truncatula] gi|902586|gb|AAC49014.1| ubiquitin [Zea
mays] gi|195619382|gb|ACG31521.1| polyubiquitin
containing 7 ubiquitin monomers [Zea mays]
gi|222847188|gb|EEE84735.1| predicted protein [Populus
trichocarpa] gi|238013752|gb|ACR37911.1| unknown [Zea
mays] gi|355508726|gb|AES89868.1| Ubiquitin [Medicago
truncatula] gi|413926508|gb|AFW66440.1| putative
ubiquitin family protein isoform 1 [Zea mays]
gi|413926509|gb|AFW66441.1| putative ubiquitin family
protein isoform 2 [Zea mays]
Length = 381
Score = 162 bits (410), Expect = 3e-38
Identities = 82/83 (98%), Positives = 82/83 (98%)
Frame = +2
Query: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 181
IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI
Sbjct: 30 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 89
Query: 182 TLEVESSDTIDNVKAKFQDKEGI 250
TLEVESSDTIDNVKAK QDKEGI
Sbjct: 90 TLEVESSDTIDNVKAKIQDKEGI 112
Score = 162 bits (410), Expect = 3e-38
Identities = 82/83 (98%), Positives = 82/83 (98%)
Frame = +2
Query: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 181
IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 165
Query: 182 TLEVESSDTIDNVKAKFQDKEGI 250
TLEVESSDTIDNVKAK QDKEGI
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGI 188
Score = 162 bits (410), Expect = 3e-38
Identities = 82/83 (98%), Positives = 82/83 (98%)
Frame = +2
Query: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 181
IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI
Sbjct: 182 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 241
Query: 182 TLEVESSDTIDNVKAKFQDKEGI 250
TLEVESSDTIDNVKAK QDKEGI
Sbjct: 242 TLEVESSDTIDNVKAKIQDKEGI 264
Score = 162 bits (410), Expect = 3e-38
Identities = 82/83 (98%), Positives = 82/83 (98%)
Frame = +2
Query: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 181
IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 317
Query: 182 TLEVESSDTIDNVKAKFQDKEGI 250
TLEVESSDTIDNVKAK QDKEGI
Sbjct: 318 TLEVESSDTIDNVKAKIQDKEGI 340
Score = 97.1 bits (240), Expect = 1e-18
Identities = 47/47 (100%), Positives = 47/47 (100%)
Frame = +2
Query: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 142
IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct: 334 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
Score = 70.1 bits (170), Expect = 2e-10
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +2
Query: 143 MQIFVKTLTGKTITLEVESSDTIDNVKAKFQDKEGI 250
MQIFVKTLTGKTITLEVESSDTIDNVKAK QDKEGI
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGI 36
>ref|NP_001174480.1| Os05g0504766 [Oryza sativa Japonica Group]
gi|242096828|ref|XP_002438904.1| hypothetical protein
SORBIDRAFT_10g028020 [Sorghum bicolor]
gi|4809266|gb|AAD30173.1|AF148448_1 polyubiquitin
[Sporobolus stapfianus] gi|57863866|gb|AAW56906.1|
polyubiquitin [Oryza sativa Japonica Group]
gi|125552905|gb|EAY98614.1| hypothetical protein
OsI_20535 [Oryza sativa Indica Group]
gi|222632152|gb|EEE64284.1| hypothetical protein
OsJ_19121 [Oryza sativa Japonica Group]
gi|241917127|gb|EER90271.1| hypothetical protein
SORBIDRAFT_10g028020 [Sorghum bicolor]
gi|255676474|dbj|BAH93208.1| Os05g0504766 [Oryza sativa
Japonica Group] gi|326510917|dbj|BAJ91806.1| predicted
protein [Hordeum vulgare subsp. vulgare]
gi|326521968|dbj|BAK04112.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|383843954|gb|AFH53939.1|
polyubiquitin 4 [Brachypodium distachyon]
gi|383843956|gb|AFH53940.1| polyubiquitin 10
[Brachypodium distachyon]
Length = 381
Score = 162 bits (410), Expect = 3e-38
Identities = 82/83 (98%), Positives = 82/83 (98%)
Frame = +2
Query: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 181
IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI
Sbjct: 30 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 89
Query: 182 TLEVESSDTIDNVKAKFQDKEGI 250
TLEVESSDTIDNVKAK QDKEGI
Sbjct: 90 TLEVESSDTIDNVKAKIQDKEGI 112
Score = 162 bits (410), Expect = 3e-38
Identities = 82/83 (98%), Positives = 82/83 (98%)
Frame = +2
Query: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 181
IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 165
Query: 182 TLEVESSDTIDNVKAKFQDKEGI 250
TLEVESSDTIDNVKAK QDKEGI
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGI 188
Score = 162 bits (410), Expect = 3e-38
Identities = 82/83 (98%), Positives = 82/83 (98%)
Frame = +2
Query: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 181
IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI
Sbjct: 182 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 241
Query: 182 TLEVESSDTIDNVKAKFQDKEGI 250
TLEVESSDTIDNVKAK QDKEGI
Sbjct: 242 TLEVESSDTIDNVKAKIQDKEGI 264
Score = 162 bits (410), Expect = 3e-38
Identities = 82/83 (98%), Positives = 82/83 (98%)
Frame = +2
Query: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 181
IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 317
Query: 182 TLEVESSDTIDNVKAKFQDKEGI 250
TLEVESSDTIDNVKAK QDKEGI
Sbjct: 318 TLEVESSDTIDNVKAKIQDKEGI 340
Score = 97.1 bits (240), Expect = 1e-18
Identities = 47/47 (100%), Positives = 47/47 (100%)
Frame = +2
Query: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 142
IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct: 334 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
Score = 70.1 bits (170), Expect = 2e-10
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +2
Query: 143 MQIFVKTLTGKTITLEVESSDTIDNVKAKFQDKEGI 250
MQIFVKTLTGKTITLEVESSDTIDNVKAK QDKEGI
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGI 36