BLASTX nr result

ID: Coptis23_contig00003285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003285
         (671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276491.1| PREDICTED: vacuolar protein sorting-associat...   135   2e-43
emb|CAN81366.1| hypothetical protein VITISV_015775 [Vitis vinifera]   135   3e-43
ref|XP_002519583.1| Vacuolar protein sorting protein, putative [...   130   2e-42
ref|XP_002307938.1| predicted protein [Populus trichocarpa] gi|2...   128   1e-41
ref|XP_003521780.1| PREDICTED: vacuolar protein sorting-associat...   133   1e-41

>ref|XP_002276491.1| PREDICTED: vacuolar protein sorting-associated protein 52 homolog
           [Vitis vinifera] gi|297737982|emb|CBI27183.3| unnamed
           protein product [Vitis vinifera]
          Length = 707

 Score =  135 bits (339), Expect(2) = 2e-43
 Identities = 66/79 (83%), Positives = 73/79 (92%)
 Frame = +3

Query: 276 VKDFASSWKNAIESMHKDVMTSFSNFLIGMDILRTALTQLLLYYTRLSDCIRRVSGGSAL 455
           VKDFAS WK+AIE MHKDV+TSFSNFL GM+ILR ALTQLLLYYTRLSDCI+R+ GGSAL
Sbjct: 627 VKDFASRWKSAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDCIKRIPGGSAL 686

Query: 456 NRDLVSIPSIMFEIRKYSR 512
           N+DLVSI SIM+EIRKYSR
Sbjct: 687 NKDLVSISSIMYEIRKYSR 705



 Score = 66.6 bits (161), Expect(2) = 2e-43
 Identities = 37/54 (68%), Positives = 40/54 (74%)
 Frame = +2

Query: 8   KEAVKEGGKAQLTQRHFEGLLKISMNTFVEELLLEHFSGMITFVKTQASEDPSS 169
           KEA  EGGK QL   HFE LLK +   FVEELLLEHF  +I FVKT+ASEDPSS
Sbjct: 562 KEAGPEGGKIQL---HFEELLKSNTAIFVEELLLEHFGDLIKFVKTRASEDPSS 612


>emb|CAN81366.1| hypothetical protein VITISV_015775 [Vitis vinifera]
          Length = 152

 Score =  135 bits (339), Expect(2) = 3e-43
 Identities = 66/79 (83%), Positives = 73/79 (92%)
 Frame = +3

Query: 276 VKDFASSWKNAIESMHKDVMTSFSNFLIGMDILRTALTQLLLYYTRLSDCIRRVSGGSAL 455
           VKDFAS WK+AIE MHKDV+TSFSNFL GM+ILR ALTQLLLYYTRLSDCI+R+ GGSAL
Sbjct: 72  VKDFASRWKSAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDCIKRIPGGSAL 131

Query: 456 NRDLVSIPSIMFEIRKYSR 512
           N+DLVSI SIM+EIRKYSR
Sbjct: 132 NKDLVSISSIMYEIRKYSR 150



 Score = 66.6 bits (161), Expect(2) = 3e-43
 Identities = 37/54 (68%), Positives = 40/54 (74%)
 Frame = +2

Query: 8   KEAVKEGGKAQLTQRHFEGLLKISMNTFVEELLLEHFSGMITFVKTQASEDPSS 169
           KEA  EGGK QL   HFE LLK +   FVEELLLEHF  +I FVKT+ASEDPSS
Sbjct: 7   KEAGPEGGKIQL---HFEELLKSNTAIFVEELLLEHFGDLIKFVKTRASEDPSS 57


>ref|XP_002519583.1| Vacuolar protein sorting protein, putative [Ricinus communis]
           gi|223541241|gb|EEF42794.1| Vacuolar protein sorting
           protein, putative [Ricinus communis]
          Length = 713

 Score =  130 bits (328), Expect(2) = 2e-42
 Identities = 64/79 (81%), Positives = 71/79 (89%)
 Frame = +3

Query: 276 VKDFASSWKNAIESMHKDVMTSFSNFLIGMDILRTALTQLLLYYTRLSDCIRRVSGGSAL 455
           VKDF S WK AIE MHKDV+TSFSNFL GM+ILR ALTQLLLYYTRLSDCI+R+ GGSAL
Sbjct: 633 VKDFGSRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDCIKRIVGGSAL 692

Query: 456 NRDLVSIPSIMFEIRKYSR 512
           N+DLVSI SIM+EI+KYSR
Sbjct: 693 NKDLVSISSIMYEIKKYSR 711



 Score = 68.2 bits (165), Expect(2) = 2e-42
 Identities = 38/54 (70%), Positives = 41/54 (75%)
 Frame = +2

Query: 8   KEAVKEGGKAQLTQRHFEGLLKISMNTFVEELLLEHFSGMITFVKTQASEDPSS 169
           KEA  EGGK QL   HFE LLK +   FVEELLLEHFS +I FVKT+ASEDPSS
Sbjct: 568 KEAGPEGGKIQL---HFEELLKSNTALFVEELLLEHFSDLIKFVKTRASEDPSS 618


>ref|XP_002307938.1| predicted protein [Populus trichocarpa] gi|222853914|gb|EEE91461.1|
           predicted protein [Populus trichocarpa]
          Length = 718

 Score =  128 bits (322), Expect(2) = 1e-41
 Identities = 64/79 (81%), Positives = 71/79 (89%)
 Frame = +3

Query: 276 VKDFASSWKNAIESMHKDVMTSFSNFLIGMDILRTALTQLLLYYTRLSDCIRRVSGGSAL 455
           VKDFAS WK AIE MHKDV+TSFSNFL GM+ILR ALTQLLLYYTRLSD I+++ GGSAL
Sbjct: 638 VKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDTIKKIVGGSAL 697

Query: 456 NRDLVSIPSIMFEIRKYSR 512
           N+DLVSI SIM+EIRKYSR
Sbjct: 698 NKDLVSISSIMYEIRKYSR 716



 Score = 67.4 bits (163), Expect(2) = 1e-41
 Identities = 36/55 (65%), Positives = 42/55 (76%)
 Frame = +2

Query: 8   KEAVKEGGKAQLTQRHFEGLLKISMNTFVEELLLEHFSGMITFVKTQASEDPSSG 172
           KEA  EGGK QL   HFE LLK + + FVEELLLEHFS +I FVK++ASE+P SG
Sbjct: 573 KEAGSEGGKIQL---HFEELLKSNTSMFVEELLLEHFSDLIKFVKSRASEEPGSG 624


>ref|XP_003521780.1| PREDICTED: vacuolar protein sorting-associated protein 52 homolog
           [Glycine max]
          Length = 707

 Score =  133 bits (335), Expect(2) = 1e-41
 Identities = 66/79 (83%), Positives = 72/79 (91%)
 Frame = +3

Query: 276 VKDFASSWKNAIESMHKDVMTSFSNFLIGMDILRTALTQLLLYYTRLSDCIRRVSGGSAL 455
           VKDFAS WK AIE MHKDV+TSFSNFL GM+ILR ALTQLLLYYTRLSDCI+R+ GGSAL
Sbjct: 627 VKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDCIKRIVGGSAL 686

Query: 456 NRDLVSIPSIMFEIRKYSR 512
           N+DLVSI SIM+EIRKYSR
Sbjct: 687 NKDLVSISSIMYEIRKYSR 705



 Score = 62.4 bits (150), Expect(2) = 1e-41
 Identities = 33/54 (61%), Positives = 40/54 (74%)
 Frame = +2

Query: 8   KEAVKEGGKAQLTQRHFEGLLKISMNTFVEELLLEHFSGMITFVKTQASEDPSS 169
           KEA  EGGK Q+   HFE LLK +   FVEELL EHF+ +I FVK++ASEDP+S
Sbjct: 562 KEAGPEGGKIQM---HFEELLKSNTTIFVEELLQEHFNNLIKFVKSKASEDPTS 612


Top