BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003279
         (803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532893.1| pentatricopeptide repeat-containing protein,...   392   e-107
ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containi...   388   e-106
emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]   388   e-106
ref|XP_002329310.1| predicted protein [Populus trichocarpa] gi|2...   375   e-102
ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containi...   363   3e-98

>ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527353|gb|EEF29498.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 625

 Score =  392 bits (1007), Expect = e-107
 Identities = 184/247 (74%), Positives = 217/247 (87%)
 Frame = +1

Query: 58  VVPNLYIYNVLIHACCKSGDVDKADKLFNEMESMCISPDIFSYNTLISLFCKKSMHYEAL 237
           V  N+++YNVLIHACCKSGDV+KAD L +EMES C+ PD+F+YNTLISL+CKK MHYEAL
Sbjct: 196 VEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEAL 255

Query: 238 AVQERMKREGVNPDIVTCNSLIYSFCREGRMREGSRLFREIKGAAPNLVTYTTLIDGYCR 417
           +VQ+RM+REG+ PDIVT NSLI+ FC+EGRMRE  RLF+EI+ A PN VTYTTLIDGYCR
Sbjct: 256 SVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDATPNHVTYTTLIDGYCR 315

Query: 418 VNDLDQALKLRQEMEMKGLLPSIVTYNSLLRKLCEAGQMKDANNLLNEMSDKKIEPDNVT 597
           +NDLDQAL+LR+EME +GL P++VTYNS+LRKLCE G+++DAN LLNEMS+KKIEPDNVT
Sbjct: 316 LNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVT 375

Query: 598 CNTLINAYCKIGDMESAWKFRNKMLEGGLVQDQFTYKALIHGFCKTREMDKAKELLFDML 777
           CNTLINAYCKIGDM+SA K +N+M+E GL  DQFTYKALIHGFCK REMD AKELL  ML
Sbjct: 376 CNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSML 435

Query: 778 DAGITIS 798
           DAG + S
Sbjct: 436 DAGFSPS 442



 Score =  116 bits (291), Expect = 5e-24
 Identities = 71/219 (32%), Positives = 109/219 (49%), Gaps = 2/219 (0%)
 Frame = +1

Query: 64  PNLYIYNVLIHACCKSGDVDKADKLFNEMESMCISPDIFSYNTLISLFCKKSMHYEALAV 243
           P +  YN ++   C+ G +  A+KL NEM    I PD  + NTLI+ +CK      AL V
Sbjct: 336 PTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKV 395

Query: 244 QERMKREGVNPDIVTCNSLIYSFCREGRMREGSRLFREI--KGAAPNLVTYTTLIDGYCR 417
           + RM   G+  D  T  +LI+ FC+   M     L   +   G +P+  TY+ L+DGYC 
Sbjct: 396 KNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCN 455

Query: 418 VNDLDQALKLRQEMEMKGLLPSIVTYNSLLRKLCEAGQMKDANNLLNEMSDKKIEPDNVT 597
             + +  LKL  E   KGL      Y +L+R+ C+  Q+  A  + + M +K    D+V 
Sbjct: 456 QQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVI 515

Query: 598 CNTLINAYCKIGDMESAWKFRNKMLEGGLVQDQFTYKAL 714
             +L  AY K+G   +A    ++M +  L+     Y+AL
Sbjct: 516 YTSLAYAYWKLGKANAASDLLDEMYKRRLMITLKIYRAL 554



 Score =  115 bits (288), Expect = 1e-23
 Identities = 71/247 (28%), Positives = 120/247 (48%), Gaps = 2/247 (0%)
 Frame = +1

Query: 64   PNLYIYNVLIHACCKSGDVDKADKLFNEMESMCISPDIFSYNTLISLFCKKSMHYEALAV 243
            PN   Y  LI   C+  D+D+A +L  EME+  + P + +YN+++   C+     +A  +
Sbjct: 301  PNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKL 360

Query: 244  QERMKREGVNPDIVTCNSLIYSFCREGRMREGSRLFREIKGAAPNL--VTYTTLIDGYCR 417
               M  + + PD VTCN+LI ++C+ G M+   ++   +  A   L   TY  LI G+C+
Sbjct: 361  LNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCK 420

Query: 418  VNDLDQALKLRQEMEMKGLLPSIVTYNSLLRKLCEAGQMKDANNLLNEMSDKKIEPDNVT 597
            + ++D A +L   M   G  PS  TY+ L+   C     +    L +E   K +  D   
Sbjct: 421  IREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSL 480

Query: 598  CNTLINAYCKIGDMESAWKFRNKMLEGGLVQDQFTYKALIHGFCKTREMDKAKELLFDML 777
               LI  +CK   ++ A K  + M E G + D   Y +L + + K  + + A +LL +M 
Sbjct: 481  YRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMY 540

Query: 778  DAGITIS 798
               + I+
Sbjct: 541  KRRLMIT 547



 Score = 93.6 bits (231), Expect = 5e-17
 Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 7/178 (3%)
 Frame = +1

Query: 271 NPDIVTCNSLIYS-----FCREGRMREGSRLFRE--IKGAAPNLVTYTTLIDGYCRVNDL 429
           +PDI   NS ++S     +      +E  ++F    + G  P+L   T L++   +    
Sbjct: 125 DPDI---NSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLT 181

Query: 430 DQALKLRQEMEMKGLLPSIVTYNSLLRKLCEAGQMKDANNLLNEMSDKKIEPDNVTCNTL 609
           D   K+ ++M   G+  +I  YN L+   C++G ++ A+NLL+EM  K + PD  T NTL
Sbjct: 182 DMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTL 241

Query: 610 INAYCKIGDMESAWKFRNKMLEGGLVQDQFTYKALIHGFCKTREMDKAKELLFDMLDA 783
           I+ YCK G    A   +++M   G+  D  TY +LIHGFCK   M +A  L  ++ DA
Sbjct: 242 ISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDA 299


>ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Vitis vinifera]
          Length = 590

 Score =  388 bits (997), Expect = e-106
 Identities = 184/247 (74%), Positives = 215/247 (87%)
 Frame = +1

Query: 58  VVPNLYIYNVLIHACCKSGDVDKADKLFNEMESMCISPDIFSYNTLISLFCKKSMHYEAL 237
           VVPN++I+NVLIHACCKSGDV+KA++L NEMES  I PD+F+YNTLISL+CKK MHYEAL
Sbjct: 193 VVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEAL 252

Query: 238 AVQERMKREGVNPDIVTCNSLIYSFCREGRMREGSRLFREIKGAAPNLVTYTTLIDGYCR 417
            +Q+RM+R GV+PDIVT NSLIY FCREGRMRE  RLFREI GA PN VTYTTLIDGYCR
Sbjct: 253 GIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGATPNHVTYTTLIDGYCR 312

Query: 418 VNDLDQALKLRQEMEMKGLLPSIVTYNSLLRKLCEAGQMKDANNLLNEMSDKKIEPDNVT 597
           VNDL++AL+LR+ ME++GL P +VTYNS+LRKLCE G++KDAN LLNEMS++K+EPDNVT
Sbjct: 313 VNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVT 372

Query: 598 CNTLINAYCKIGDMESAWKFRNKMLEGGLVQDQFTYKALIHGFCKTREMDKAKELLFDML 777
           CNTLINAYCKIGDM SA K + KMLE GL  DQFT+KALIHGFCK  E+D AKE LF+ML
Sbjct: 373 CNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEML 432

Query: 778 DAGITIS 798
           DAG + S
Sbjct: 433 DAGFSPS 439



 Score =  111 bits (278), Expect = 2e-22
 Identities = 68/239 (28%), Positives = 118/239 (49%), Gaps = 2/239 (0%)
 Frame = +1

Query: 64   PNLYIYNVLIHACCKSGDVDKADKLFNEMESMCISPDIFSYNTLISLFCKKSMHYEALAV 243
            PN   Y  LI   C+  D+++A +L   ME   + P + +YN+++   C++    +A  +
Sbjct: 298  PNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRL 357

Query: 244  QERMKREGVNPDIVTCNSLIYSFCREGRMREGSRLFREI--KGAAPNLVTYTTLIDGYCR 417
               M    V PD VTCN+LI ++C+ G M    ++ +++   G  P+  T+  LI G+C+
Sbjct: 358  LNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCK 417

Query: 418  VNDLDQALKLRQEMEMKGLLPSIVTYNSLLRKLCEAGQMKDANNLLNEMSDKKIEPDNVT 597
            ++++D A +   EM   G  PS  TY+ L+    +    +    L +E+S K +  D   
Sbjct: 418  LHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISV 477

Query: 598  CNTLINAYCKIGDMESAWKFRNKMLEGGLVQDQFTYKALIHGFCKTREMDKAKELLFDM 774
               LI   CKI  +ESA +    M   G+  D   Y +L + + K  +   A ++L +M
Sbjct: 478  YRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEM 536



 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 37/209 (17%)
 Frame = +1

Query: 64  PNLYIYNVLIHACCKSGDVDKADKLFNEMESMCISPDIFSYNTLISLFCKKSMHYEALAV 243
           P +  YN ++   C+ G +  A++L NEM    + PD  + NTLI+ +CK      A+ V
Sbjct: 333 PGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKV 392

Query: 244 QERMKREGVNPDIVTCNSLIYSFCREGRMREGSRLFREI--KGAAPNLVTYTTLIDGYCR 417
           +++M   G+ PD  T  +LI+ FC+   +        E+   G +P+  TY+ L+D Y  
Sbjct: 393 KKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYD 452

Query: 418 VNDLDQALKLRQEMEMKGLLPSIVTYNSLLRKLCE------------------------- 522
            ++ +  ++L  E+  KGL   I  Y +L+R+LC+                         
Sbjct: 453 QDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVV 512

Query: 523 ----------AGQMKDANNLLNEMSDKKI 579
                     AG+   A+++L+EM  +++
Sbjct: 513 YTSLAYAYFKAGKAIAASDMLDEMDKRRL 541



 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 47/135 (34%), Positives = 75/135 (55%)
 Frame = +1

Query: 358 IKGAAPNLVTYTTLIDGYCRVNDLDQALKLRQEMEMKGLLPSIVTYNSLLRKLCEAGQMK 537
           + G  P+L   T L++   +    +   K+ ++M   G++P+I  +N L+   C++G ++
Sbjct: 155 VHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVE 214

Query: 538 DANNLLNEMSDKKIEPDNVTCNTLINAYCKIGDMESAWKFRNKMLEGGLVQDQFTYKALI 717
            A  LLNEM  + I PD  T NTLI+ YCK G    A   +++M  GG+  D  TY +LI
Sbjct: 215 KAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLI 274

Query: 718 HGFCKTREMDKAKEL 762
           +GFC+   M +A  L
Sbjct: 275 YGFCREGRMREALRL 289



 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 2/184 (1%)
 Frame = +1

Query: 64  PNLYIYNVLIHACCKSGDVDKADKLFNEMESMCISPDIFSYNTLISLFCKKSMHYEALAV 243
           P+ + +  LIH  CK  +VD A +   EM     SP   +Y+ L+  +  +      + +
Sbjct: 403 PDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRL 462

Query: 244 QERMKREGVNPDIVTCNSLIYSFCREGRMREGSRLFREI--KGAAPNLVTYTTLIDGYCR 417
            + + R+G+  DI    +LI   C+  ++    R+F  +  KG   + V YT+L   Y +
Sbjct: 463 PDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFK 522

Query: 418 VNDLDQALKLRQEMEMKGLLPSIVTYNSLLRKLCEAGQMKDANNLLNEMSDKKIEPDNVT 597
                 A  +  EM+ + L+ ++  Y       C +       ++L    D  IE   ++
Sbjct: 523 AGKAIAASDMLDEMDKRRLMITLKIYR------CFSASYAGDGSILGLFWDHVIERRLIS 576

Query: 598 CNTL 609
            N L
Sbjct: 577 KNIL 580


>emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
          Length = 590

 Score =  388 bits (997), Expect = e-106
 Identities = 184/247 (74%), Positives = 215/247 (87%)
 Frame = +1

Query: 58  VVPNLYIYNVLIHACCKSGDVDKADKLFNEMESMCISPDIFSYNTLISLFCKKSMHYEAL 237
           VVPN++I+NVLIHACCKSGDV+KA++L NEMES  I PD+F+YNTLISL+CKK MHYEAL
Sbjct: 193 VVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEAL 252

Query: 238 AVQERMKREGVNPDIVTCNSLIYSFCREGRMREGSRLFREIKGAAPNLVTYTTLIDGYCR 417
            +Q+RM+R GV+PDIVT NSLIY FCREGRMRE  RLFREI GA PN VTYTTLIDGYCR
Sbjct: 253 GIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGATPNHVTYTTLIDGYCR 312

Query: 418 VNDLDQALKLRQEMEMKGLLPSIVTYNSLLRKLCEAGQMKDANNLLNEMSDKKIEPDNVT 597
           VNDL++AL+LR+ ME++GL P +VTYNS+LRKLCE G++KDAN LLNEMS++K+EPDNVT
Sbjct: 313 VNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVT 372

Query: 598 CNTLINAYCKIGDMESAWKFRNKMLEGGLVQDQFTYKALIHGFCKTREMDKAKELLFDML 777
           CNTLINAYCKIGDM SA K + KMLE GL  DQFT+KALIHGFCK  E+D AKE LF+ML
Sbjct: 373 CNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEML 432

Query: 778 DAGITIS 798
           DAG + S
Sbjct: 433 DAGFSPS 439



 Score =  111 bits (278), Expect = 2e-22
 Identities = 68/239 (28%), Positives = 118/239 (49%), Gaps = 2/239 (0%)
 Frame = +1

Query: 64   PNLYIYNVLIHACCKSGDVDKADKLFNEMESMCISPDIFSYNTLISLFCKKSMHYEALAV 243
            PN   Y  LI   C+  D+++A +L   ME   + P + +YN+++   C++    +A  +
Sbjct: 298  PNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRL 357

Query: 244  QERMKREGVNPDIVTCNSLIYSFCREGRMREGSRLFREI--KGAAPNLVTYTTLIDGYCR 417
               M    V PD VTCN+LI ++C+ G M    ++ +++   G  P+  T+  LI G+C+
Sbjct: 358  LNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCK 417

Query: 418  VNDLDQALKLRQEMEMKGLLPSIVTYNSLLRKLCEAGQMKDANNLLNEMSDKKIEPDNVT 597
            ++++D A +   EM   G  PS  TY+ L+    +    +    L +E+S K +  D   
Sbjct: 418  LHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISV 477

Query: 598  CNTLINAYCKIGDMESAWKFRNKMLEGGLVQDQFTYKALIHGFCKTREMDKAKELLFDM 774
               LI   CKI  +ESA +    M   G+  D   Y +L + + K  +   A ++L +M
Sbjct: 478  YRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEM 536



 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 37/209 (17%)
 Frame = +1

Query: 64  PNLYIYNVLIHACCKSGDVDKADKLFNEMESMCISPDIFSYNTLISLFCKKSMHYEALAV 243
           P +  YN ++   C+ G +  A++L NEM    + PD  + NTLI+ +CK      A+ V
Sbjct: 333 PGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKV 392

Query: 244 QERMKREGVNPDIVTCNSLIYSFCREGRMREGSRLFREI--KGAAPNLVTYTTLIDGYCR 417
           +++M   G+ PD  T  +LI+ FC+   +        E+   G +P+  TY+ L+D Y  
Sbjct: 393 KKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYD 452

Query: 418 VNDLDQALKLRQEMEMKGLLPSIVTYNSLLRKLCE------------------------- 522
            ++ +  ++L  E+  KGL   I  Y +L+R+LC+                         
Sbjct: 453 QDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVV 512

Query: 523 ----------AGQMKDANNLLNEMSDKKI 579
                     AG+   A+++L+EM  +++
Sbjct: 513 YTSLAYAYFKAGKAIAASDMLDEMDKRRL 541



 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 47/135 (34%), Positives = 75/135 (55%)
 Frame = +1

Query: 358 IKGAAPNLVTYTTLIDGYCRVNDLDQALKLRQEMEMKGLLPSIVTYNSLLRKLCEAGQMK 537
           + G  P+L   T L++   +    +   K+ ++M   G++P+I  +N L+   C++G ++
Sbjct: 155 VHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVE 214

Query: 538 DANNLLNEMSDKKIEPDNVTCNTLINAYCKIGDMESAWKFRNKMLEGGLVQDQFTYKALI 717
            A  LLNEM  + I PD  T NTLI+ YCK G    A   +++M  GG+  D  TY +LI
Sbjct: 215 KAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLI 274

Query: 718 HGFCKTREMDKAKEL 762
           +GFC+   M +A  L
Sbjct: 275 YGFCREGRMREALRL 289



 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 2/184 (1%)
 Frame = +1

Query: 64  PNLYIYNVLIHACCKSGDVDKADKLFNEMESMCISPDIFSYNTLISLFCKKSMHYEALAV 243
           P+ + +  LIH  CK  +VD A +   EM     SP   +Y+ L+  +  +      + +
Sbjct: 403 PDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRL 462

Query: 244 QERMKREGVNPDIVTCNSLIYSFCREGRMREGSRLFREI--KGAAPNLVTYTTLIDGYCR 417
            + + R+G+  DI    +LI   C+  ++    R+F  +  KG   + V YT+L   Y +
Sbjct: 463 PDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFK 522

Query: 418 VNDLDQALKLRQEMEMKGLLPSIVTYNSLLRKLCEAGQMKDANNLLNEMSDKKIEPDNVT 597
                 A  +  EM+ + L+ ++  Y       C +       ++L    D  IE   ++
Sbjct: 523 AGKAIAASDMLDEMDKRRLMITLKIYR------CFSASYAGDGSILGLFWDHVIERRLIS 576

Query: 598 CNTL 609
            N L
Sbjct: 577 KNIL 580


>ref|XP_002329310.1| predicted protein [Populus trichocarpa] gi|222870764|gb|EEF07895.1|
           predicted protein [Populus trichocarpa]
          Length = 593

 Score =  375 bits (962), Expect = e-102
 Identities = 173/247 (70%), Positives = 213/247 (86%)
 Frame = +1

Query: 58  VVPNLYIYNVLIHACCKSGDVDKADKLFNEMESMCISPDIFSYNTLISLFCKKSMHYEAL 237
           VV N+++YNVL+HACCKSGDV+KA+K+ +EME  C+ PD+F+YNTLISL+CKK MHYEAL
Sbjct: 202 VVANIHVYNVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEAL 261

Query: 238 AVQERMKREGVNPDIVTCNSLIYSFCREGRMREGSRLFREIKGAAPNLVTYTTLIDGYCR 417
           +VQ+RM+  G++PDI T NSLIY FCREGRMRE  +LFR+IK   PN VTYT+LIDGYCR
Sbjct: 262 SVQDRMEMAGISPDIFTYNSLIYGFCREGRMREAVQLFRDIKDVTPNHVTYTSLIDGYCR 321

Query: 418 VNDLDQALKLRQEMEMKGLLPSIVTYNSLLRKLCEAGQMKDANNLLNEMSDKKIEPDNVT 597
           VNDLD+AL+L++ M  KGL P+++TYNS+LRKLCE G+++DAN LLNEMS++KIEPDNVT
Sbjct: 322 VNDLDEALRLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVT 381

Query: 598 CNTLINAYCKIGDMESAWKFRNKMLEGGLVQDQFTYKALIHGFCKTREMDKAKELLFDML 777
           CNTLINAYCKIGDM SA K ++KM+  GL  DQFTYKALIHGFCK +E+DKAKELLF M+
Sbjct: 382 CNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEIDKAKELLFGMM 441

Query: 778 DAGITIS 798
           DAG + S
Sbjct: 442 DAGFSPS 448



 Score =  116 bits (290), Expect = 7e-24
 Identities = 69/249 (27%), Positives = 122/249 (48%), Gaps = 2/249 (0%)
 Frame = +1

Query: 58   VVPNLYIYNVLIHACCKSGDVDKADKLFNEMESMCISPDIFSYNTLISLFCKKSMHYEAL 237
            V PN   Y  LI   C+  D+D+A +L   M    + P + +YN+++   C+     +A 
Sbjct: 305  VTPNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDAN 364

Query: 238  AVQERMKREGVNPDIVTCNSLIYSFCREGRMREGSRLFREIKGAAPNL--VTYTTLIDGY 411
             +   M    + PD VTCN+LI ++C+ G MR   ++  ++ GA   L   TY  LI G+
Sbjct: 365  ILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGF 424

Query: 412  CRVNDLDQALKLRQEMEMKGLLPSIVTYNSLLRKLCEAGQMKDANNLLNEMSDKKIEPDN 591
            C+  ++D+A +L   M   G  PS  TY+ L+   C+    +    L +E+  + +  D 
Sbjct: 425  CKAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVIKLPDELVRRGLCVDV 484

Query: 592  VTCNTLINAYCKIGDMESAWKFRNKMLEGGLVQDQFTYKALIHGFCKTREMDKAKELLFD 771
                 LI  +CKI  ++ A +    M + G+  D   Y +L +G+ K  +++   ++L +
Sbjct: 485  SVYRALIRRFCKIEKIDCAQRVLGLMKDKGIFGDSVVYTSLAYGYWKVGKVNVTSDILDE 544

Query: 772  MLDAGITIS 798
            M    + I+
Sbjct: 545  MYKKRLMIT 553



 Score = 89.4 bits (220), Expect = 9e-16
 Identities = 49/141 (34%), Positives = 78/141 (55%)
 Frame = +1

Query: 358 IKGAAPNLVTYTTLIDGYCRVNDLDQALKLRQEMEMKGLLPSIVTYNSLLRKLCEAGQMK 537
           + G  P+L   T L++   +    D   K+ ++M   G++ +I  YN LL   C++G ++
Sbjct: 164 VNGFRPHLHACTVLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNVLLHACCKSGDVE 223

Query: 538 DANNLLNEMSDKKIEPDNVTCNTLINAYCKIGDMESAWKFRNKMLEGGLVQDQFTYKALI 717
            A  +L+EM  K + PD  T NTLI+ YCK G    A   +++M   G+  D FTY +LI
Sbjct: 224 KAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSLI 283

Query: 718 HGFCKTREMDKAKELLFDMLD 780
           +GFC+   M +A +L  D+ D
Sbjct: 284 YGFCREGRMREAVQLFRDIKD 304


>ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Glycine max]
          Length = 587

 Score =  363 bits (931), Expect = 3e-98
 Identities = 168/247 (68%), Positives = 208/247 (84%)
 Frame = +1

Query: 58  VVPNLYIYNVLIHACCKSGDVDKADKLFNEMESMCISPDIFSYNTLISLFCKKSMHYEAL 237
           VVPN+YIYN L HAC KSGDV++A++L NEM+   +  DIF+YNTL+SL+CKK MHYEAL
Sbjct: 192 VVPNIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEAL 251

Query: 238 AVQERMKREGVNPDIVTCNSLIYSFCREGRMREGSRLFREIKGAAPNLVTYTTLIDGYCR 417
           ++Q RM+REG+N DIV+ NSLIY FC+EGRMRE  R+F EIK A PN VTYTTLIDGYC+
Sbjct: 252 SIQNRMEREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEIKNATPNHVTYTTLIDGYCK 311

Query: 418 VNDLDQALKLRQEMEMKGLLPSIVTYNSLLRKLCEAGQMKDANNLLNEMSDKKIEPDNVT 597
            N+L++ALK+ + ME KGL P +VTYNS+LRKLC+ G+++DAN LLNEMS++K++ DN+T
Sbjct: 312 TNELEEALKMCKLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEMSERKLQADNIT 371

Query: 598 CNTLINAYCKIGDMESAWKFRNKMLEGGLVQDQFTYKALIHGFCKTREMDKAKELLFDML 777
           CNTLINAYCKIGD++SA KF+NKMLE GL  D FTYKALIHGFCKT E++ AKEL+F ML
Sbjct: 372 CNTLINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYKALIHGFCKTNELESAKELMFSML 431

Query: 778 DAGITIS 798
           DAG T S
Sbjct: 432 DAGFTPS 438



 Score =  107 bits (268), Expect = 2e-21
 Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 2/204 (0%)
 Frame = +1

Query: 64  PNLYIYNVLIHACCKSGDVDKADKLFNEMESMCISPDIFSYNTLISLFCKKSMHYEALAV 243
           P +  YN ++   C+ G +  A+KL NEM    +  D  + NTLI+ +CK      AL  
Sbjct: 332 PGVVTYNSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLKSALKF 391

Query: 244 QERMKREGVNPDIVTCNSLIYSFCREGRMREGSRLFREI--KGAAPNLVTYTTLIDGYCR 417
           + +M   G+ PD  T  +LI+ FC+   +     L   +   G  P+  TY+ ++DGY +
Sbjct: 392 KNKMLEAGLKPDPFTYKALIHGFCKTNELESAKELMFSMLDAGFTPSYCTYSWIVDGYNK 451

Query: 418 VNDLDQALKLRQEMEMKGLLPSIVTYNSLLRKLCEAGQMKDANNLLNEMSDKKIEPDNVT 597
            +++D  L L  E   +G+   +  Y +L+R  C+  +++ A  L   M  K I  ++V 
Sbjct: 452 KDNMDAVLALPDEFLSRGICLDVSVYRALIRSSCKVERIQCAERLFYHMEGKGISGESVI 511

Query: 598 CNTLINAYCKIGDMESAWKFRNKM 669
             ++  AY  +G++ +A     +M
Sbjct: 512 YTSIAYAYWNVGNVSAASSMLEEM 535



 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 67/269 (24%), Positives = 122/269 (45%), Gaps = 37/269 (13%)
 Frame = +1

Query: 79   YNVLIHACCKSGDVDKADKLFNEMESMCISPDIFSYNTLISLFCKKSMHYEALAVQERMK 258
            YN LI+  CK G + +A ++F+E+++   +P+  +Y TLI  +CK +   EAL + + M+
Sbjct: 269  YNSLIYGFCKEGRMREAMRMFSEIKNA--TPNHVTYTTLIDGYCKTNELEEALKMCKLME 326

Query: 259  REGVNPDIVTCNSLIYSFCREGRMREGSRLFREIK------------------------- 363
             +G+ P +VT NS++   C++GR+R+ ++L  E+                          
Sbjct: 327  AKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLK 386

Query: 364  ------------GAAPNLVTYTTLIDGYCRVNDLDQALKLRQEMEMKGLLPSIVTYNSLL 507
                        G  P+  TY  LI G+C+ N+L+ A +L   M   G  PS  TY+ ++
Sbjct: 387  SALKFKNKMLEAGLKPDPFTYKALIHGFCKTNELESAKELMFSMLDAGFTPSYCTYSWIV 446

Query: 508  RKLCEAGQMKDANNLLNEMSDKKIEPDNVTCNTLINAYCKIGDMESAWKFRNKMLEGGLV 687
                +   M     L +E   + I  D      LI + CK+  ++ A +    M   G+ 
Sbjct: 447  DGYNKKDNMDAVLALPDEFLSRGICLDVSVYRALIRSSCKVERIQCAERLFYHMEGKGIS 506

Query: 688  QDQFTYKALIHGFCKTREMDKAKELLFDM 774
             +   Y ++ + +     +  A  +L +M
Sbjct: 507  GESVIYTSIAYAYWNVGNVSAASSMLEEM 535



 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 55/197 (27%), Positives = 89/197 (45%)
 Frame = +1

Query: 193 LISLFCKKSMHYEALAVQERMKREGVNPDIVTCNSLIYSFCREGRMREGSRLFREIKGAA 372
           L+  + K  M  +A+ V E+M+   V P +  C  L+ S  ++G                
Sbjct: 132 LVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDG---------------- 175

Query: 373 PNLVTYTTLIDGYCRVNDLDQALKLRQEMEMKGLLPSIVTYNSLLRKLCEAGQMKDANNL 552
              VT+                 K+ + M   G++P+I  YN L     ++G ++ A  L
Sbjct: 176 ---VTH--------------MVWKIYKRMVQVGVVPNIYIYNCLFHACSKSGDVERAEQL 218

Query: 553 LNEMSDKKIEPDNVTCNTLINAYCKIGDMESAWKFRNKMLEGGLVQDQFTYKALIHGFCK 732
           LNEM  K +  D  T NTL++ YCK G    A   +N+M   G+  D  +Y +LI+GFCK
Sbjct: 219 LNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQNRMEREGINLDIVSYNSLIYGFCK 278

Query: 733 TREMDKAKELLFDMLDA 783
              M +A  +  ++ +A
Sbjct: 279 EGRMREAMRMFSEIKNA 295



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 2/178 (1%)
 Frame = +1

Query: 64  PNLYIYNVLIHACCKSGDVDKADKLFNEMESMCISPDIFSYNTLISLFCKKSMHYEALAV 243
           P+ + Y  LIH  CK+ +++ A +L   M     +P   +Y+ ++  + KK      LA+
Sbjct: 402 PDPFTYKALIHGFCKTNELESAKELMFSMLDAGFTPSYCTYSWIVDGYNKKDNMDAVLAL 461

Query: 244 QERMKREGVNPDIVTCNSLIYSFCREGRMREGSRLF--REIKGAAPNLVTYTTLIDGYCR 417
            +     G+  D+    +LI S C+  R++   RLF   E KG +   V YT++   Y  
Sbjct: 462 PDEFLSRGICLDVSVYRALIRSSCKVERIQCAERLFYHMEGKGISGESVIYTSIAYAYWN 521

Query: 418 VNDLDQALKLRQEMEMKGLLPSIVTYNSLLRKLCEAGQMKDANNLLNEMSDKKIEPDN 591
           V ++  A  + +EM  + L+ ++  Y        +A + K +    N + D+ +   N
Sbjct: 522 VGNVSAASSMLEEMARRRLMITVKLYRCF--STSDANENKVSQIFWNHVMDRGLMSRN 577