BLASTX nr result

ID: Coptis23_contig00003277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003277
         (1080 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278692.1| PREDICTED: uncharacterized protein LOC100257...   105   2e-20
gb|AFK45492.1| unknown [Lotus japonicus]                               94   8e-17
ref|XP_004144965.1| PREDICTED: uncharacterized protein LOC101217...    86   2e-14
ref|XP_002315543.1| predicted protein [Populus trichocarpa] gi|2...    85   3e-14
ref|XP_002311816.1| predicted protein [Populus trichocarpa] gi|2...    84   8e-14

>ref|XP_002278692.1| PREDICTED: uncharacterized protein LOC100257948 [Vitis vinifera]
          Length = 188

 Score =  105 bits (262), Expect = 2e-20
 Identities = 86/213 (40%), Positives = 108/213 (50%), Gaps = 31/213 (14%)
 Frame = -2

Query: 929 MGTEVLRPQDILNERFIRLPSV---------SRKSFRKQALEKE---------------- 825
           MGTE+LRPQD L ER    P+V         S K+ R+  +  E                
Sbjct: 1   MGTEILRPQDCLIERMGVSPAVFPRRKAFPGSAKANRRPVVRAERSDQKRRGSQSEGSIS 60

Query: 824 ---SKKPVAAPVKNLVLGQVKILKRGEPLDLKKKSENVLRKSFSEEIFSVXXXXXXXXNL 654
              S   V A   N+V+G V IL+RGE LD K KSE  L+K+  EE+             
Sbjct: 61  KRSSSDDVRAAKGNVVVGPVTILRRGESLDSKLKSE-ALKKNGEEEM------------- 106

Query: 653 RKTFSGEIVVG-RRIGPDPELVP--IRLSDLKKSFPNRCSDNNDDVYAGSVCYTSPSPRK 483
                  IV G  R+GPDPE+VP  IR+ DLK    +  +    D+YAGS    SPSP  
Sbjct: 107 -------IVSGTERLGPDPEMVPKQIRIKDLKPFAFSVAA--KPDMYAGSAFALSPSPSS 157

Query: 482 LPLPTFKVRKEGLVLPAVDDSATKDLRRLLRID 384
           LPLP+F  +K+  + P VDD ATKDLRRLLR+D
Sbjct: 158 LPLPSFSRKKQ--MSPVVDDWATKDLRRLLRLD 188


>gb|AFK45492.1| unknown [Lotus japonicus]
          Length = 180

 Score = 93.6 bits (231), Expect = 8e-17
 Identities = 83/215 (38%), Positives = 111/215 (51%), Gaps = 33/215 (15%)
 Frame = -2

Query: 929 MGTEVLRPQDILNERFIRLPSVSRKSFRK----------QALEKESKKPVAAPVKN---- 792
           MGTE+LRPQ+ L ER IR P  S  S+R+           A  + ++KPVA P +     
Sbjct: 1   MGTEILRPQNCLIER-IRAPPASF-SWRRTTYGNCGAYLNAPFRANRKPVARPEQRKRVV 58

Query: 791 ----------------LVLGQVKILKRGEPLDLKKKSENVLRKSFSEEIFSVXXXXXXXX 660
                           LV+ +V IL+RGE LD + KSE + R+   +E+           
Sbjct: 59  ERRPSSDDSKVARGSGLVMEKVTILRRGESLDSQIKSEALKREG--DEL----------- 105

Query: 659 NLRKTFSGEIVVG-RRIGPDPELVP--IRLSDLKKSFPNRCSDNNDDVYAGSVCYTSPSP 489
                    +VVG +R+GPDPE+VP  IR+ D +  F         D+YAGS    SPSP
Sbjct: 106 ---------VVVGTQRLGPDPEMVPKQIRIMDGQIGF---------DMYAGSAFAMSPSP 147

Query: 488 RKLPLPTFKVRKEGLVLPAVDDSATKDLRRLLRID 384
           R LPLP+F  +    V  AVDDSAT+DLRRLLR++
Sbjct: 148 RALPLPSFWKKVAPAV--AVDDSATRDLRRLLRLE 180


>ref|XP_004144965.1| PREDICTED: uncharacterized protein LOC101217755 [Cucumis sativus]
           gi|449516675|ref|XP_004165372.1| PREDICTED:
           uncharacterized protein LOC101232319 [Cucumis sativus]
          Length = 200

 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 81/229 (35%), Positives = 103/229 (44%), Gaps = 47/229 (20%)
 Frame = -2

Query: 929 MGTEVLRPQDILNERFIRLPSVS------------------------RKSF--------- 849
           MGTE+LRPQD L ER IR+P  +                        RKS          
Sbjct: 1   MGTEILRPQDCLIER-IRVPPAAFCRRRSSYGNYDSNICNNYNPRSNRKSVARSERPERP 59

Query: 848 --RKQALEKESKKPVA---------APVKNLVLGQVKILKRGEPLDLKKKSENVLRKSFS 702
             RK+ +   S+  V+         A   +LV+ +V IL+RGE LD K KSE        
Sbjct: 60  EQRKRFVPNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSE-------- 111

Query: 701 EEIFSVXXXXXXXXNLRKTFSGEIVVGR-RIGPDPELVP--IRLSDLKKSFPNRCSDNND 531
                          L+K     +V G  R+GP PE V   IR+ D++     +      
Sbjct: 112 --------------ALKKEGDNIVVCGTDRLGPAPETVAKQIRIVDVRSPIAGKA----- 152

Query: 530 DVYAGSVCYTSPSPRKLPLPTFKVRKEGLVLPAVDDSATKDLRRLLRID 384
           DVYAGS    SPSP  LPLP+F  +K   V   VDDSAT+DLRRLLR+D
Sbjct: 153 DVYAGSAFSMSPSPSSLPLPSFSKKKH--VSAIVDDSATRDLRRLLRLD 199


>ref|XP_002315543.1| predicted protein [Populus trichocarpa] gi|222864583|gb|EEF01714.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score = 85.1 bits (209), Expect = 3e-14
 Identities = 75/233 (32%), Positives = 103/233 (44%), Gaps = 51/233 (21%)
 Frame = -2

Query: 929 MGTEVLRPQDIL------------------------------------NERFIRLPSVSR 858
           MGTEV RPQD L                                    N RF R P+  R
Sbjct: 1   MGTEVARPQDCLIERIRVSPCRRRNYYYGNGNVSNPNAYSTNSYCNNSNPRFNRKPTAVR 60

Query: 857 KSFRKQALEKESKKP-----------VAAPVKNLVLGQVKILKRGEPLDLKKKSENVLRK 711
             F +    K+  +P           +  P  N V+ +V IL+RGE LD K KS +    
Sbjct: 61  --FERSGQRKKQPEPSISKKSGTVDDLKIPRNNKVMEKVTILRRGESLDTKIKSSDTA-- 116

Query: 710 SFSEEIFSVXXXXXXXXNLRKTFSGEIVVGR--RIGPDPELVP--IRLSDLKKSFPNRCS 543
           S  +E               +   G+ VV    R+GPDP++V   IR+ DL+     +C 
Sbjct: 117 SLKKE---------------QGNGGDFVVASTDRLGPDPKVVSKQIRIVDLRSPVNGKC- 160

Query: 542 DNNDDVYAGSVCYTSPSPRKLPLPTFKVRKEGLVLPAVDDSATKDLRRLLRID 384
               D+YAGS    SP+P  LPLP+F  +K+     ++DDSAT+DLRRLLR++
Sbjct: 161 ----DMYAGSAFAVSPAPSSLPLPSFSKKKQ----VSIDDSATRDLRRLLRLE 205


>ref|XP_002311816.1| predicted protein [Populus trichocarpa] gi|222851636|gb|EEE89183.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score = 83.6 bits (205), Expect = 8e-14
 Identities = 78/237 (32%), Positives = 101/237 (42%), Gaps = 55/237 (23%)
 Frame = -2

Query: 929 MGTEVLRPQDILNER------------------------------------FIRLPSVSR 858
           MGTEVLRPQD L ER                                    F R P+  R
Sbjct: 1   MGTEVLRPQDCLTERTRVSPCRRRNYYYGNGNGNFANPNVYSSNNNRNNPRFNRKPTAVR 60

Query: 857 KSFRKQALEKESKKPVAAPVK---------------NLVLGQVKILKRGEPLDLKKKSEN 723
            S R    +K+S+  V+   +               N V+ +V IL+RGE LD K KS  
Sbjct: 61  -SDRSDQRKKQSEPSVSKKSRSVDDFVKIYKNNSSNNKVMEKVTILRRGESLDSKIKSSE 119

Query: 722 VLRKSFSEEIFSVXXXXXXXXNLRKTFSGEIVVGR--RIGPDPELVP--IRLSDLKKSFP 555
               + S +               +   G++VV    R+GPDP+ V   IR+ DL+    
Sbjct: 120 TASATVSSK-------------KEQGNGGDLVVTSTDRLGPDPKTVSKQIRIVDLRSPVA 166

Query: 554 NRCSDNNDDVYAGSVCYTSPSPRKLPLPTFKVRKEGLVLPAVDDSATKDLRRLLRID 384
             C     D+YAGS    SP P  LPLP F  +K      +VDDSAT+DLRRLLR+D
Sbjct: 167 GNC-----DMYAGSAFSVSPPPSSLPLPLFSKKKH----LSVDDSATRDLRRLLRLD 214


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