BLASTX nr result

ID: Coptis23_contig00003275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003275
         (1681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533345.1| Late embryogenesis abundant protein Lea14-A,...   458   e-126
ref|XP_002310373.1| predicted protein [Populus trichocarpa] gi|2...   449   e-123
gb|ABK95225.1| unknown [Populus trichocarpa]                          449   e-123
emb|CBI24768.3| unnamed protein product [Vitis vinifera]              446   e-123
gb|AFK47398.1| unknown [Lotus japonicus]                              445   e-122

>ref|XP_002533345.1| Late embryogenesis abundant protein Lea14-A, putative [Ricinus
            communis] gi|223526810|gb|EEF29030.1| Late embryogenesis
            abundant protein Lea14-A, putative [Ricinus communis]
          Length = 313

 Score =  458 bits (1179), Expect = e-126
 Identities = 220/279 (78%), Positives = 251/279 (89%)
 Frame = -1

Query: 1300 GGFIDKVKDFIQNIGEKIEEAVGFGKPTADVTGIHIPSITLKKADIVVDVLVAXXXXXXX 1121
            GGFIDKVKDFI +IGEKIEEA+GFGKPTADVTG+HIPSI L+KADIVVDVL+        
Sbjct: 25   GGFIDKVKDFIHDIGEKIEEAIGFGKPTADVTGVHIPSINLEKADIVVDVLIKNPNPVPI 84

Query: 1120 XXXXXNYLVESAGRKLVSGLIPDAGTIHAHGSETVKIPITLMYDDIKNTYDDIKPGSIIP 941
                 NYL+ES GRKL+SGLIPDAGTI AHG ETVKIP+TL+YDDIKNTYDDI+PGSIIP
Sbjct: 85   PLVDINYLIESDGRKLISGLIPDAGTIRAHGEETVKIPVTLIYDDIKNTYDDIQPGSIIP 144

Query: 940  YKIKVELIVDVPIFGRLTLPLEKTGEIPIPYKPDVDVEKISFKKFSFEETVALLHLKLEN 761
            Y+IKV+LI+DVP+FGRLTLPLEKTGEIPIPYKPD+D+EKI F++FSFEETVA+LH+KLEN
Sbjct: 145  YRIKVDLIIDVPVFGRLTLPLEKTGEIPIPYKPDIDLEKIHFERFSFEETVAVLHVKLEN 204

Query: 760  MNDFDLGLNALSSEIWLSGVSIGGAKLTESSKIDKNGISYIDLPITFRPKDLGSAVWDMI 581
            MNDFDLGLN L  E+WLS VSIGGA+L ES+KI+K GISYID+PITFRPKD GSA+WDMI
Sbjct: 205  MNDFDLGLNGLDYEVWLSDVSIGGAELAESTKIEKKGISYIDIPITFRPKDFGSALWDMI 264

Query: 580  RGRGTGYSIKGDIDVDTPFGAMKLPISKEGGTTSIKKNK 464
            RG+GTGY++KG I+VDTPFGAMKLPISKEGGTT +KKNK
Sbjct: 265  RGKGTGYTMKGHINVDTPFGAMKLPISKEGGTTRLKKNK 303


>ref|XP_002310373.1| predicted protein [Populus trichocarpa] gi|222853276|gb|EEE90823.1|
            predicted protein [Populus trichocarpa]
          Length = 315

 Score =  449 bits (1155), Expect = e-123
 Identities = 216/279 (77%), Positives = 248/279 (88%)
 Frame = -1

Query: 1300 GGFIDKVKDFIQNIGEKIEEAVGFGKPTADVTGIHIPSITLKKADIVVDVLVAXXXXXXX 1121
            GGFIDKVKDFIQ+IGEKIE A+GFGKPTADVT IH P+I L+KA+IVVDVL+        
Sbjct: 24   GGFIDKVKDFIQDIGEKIEGAIGFGKPTADVTEIHFPTINLEKAEIVVDVLIKNPNPVPI 83

Query: 1120 XXXXXNYLVESAGRKLVSGLIPDAGTIHAHGSETVKIPITLMYDDIKNTYDDIKPGSIIP 941
                 NYL+ES GRKL+SGLIPDAGTI AHG ETVKIPI L+YDDIKNTYDDIKPGSIIP
Sbjct: 84   PLIDINYLIESDGRKLISGLIPDAGTIRAHGEETVKIPIHLVYDDIKNTYDDIKPGSIIP 143

Query: 940  YKIKVELIVDVPIFGRLTLPLEKTGEIPIPYKPDVDVEKISFKKFSFEETVALLHLKLEN 761
            Y+IKV+ IVDVPIFGRLTLPLEKTGEIP+PYKPD+D+EKI F++FSFEETVA+LHLKLEN
Sbjct: 144  YRIKVDFIVDVPIFGRLTLPLEKTGEIPVPYKPDIDIEKIKFERFSFEETVAVLHLKLEN 203

Query: 760  MNDFDLGLNALSSEIWLSGVSIGGAKLTESSKIDKNGISYIDLPITFRPKDLGSAVWDMI 581
             NDFDLGLN+L  E+WLS VSIGGA+L ES+K+DKNGI+Y+D+PITF+PKD GSA+WDMI
Sbjct: 204  KNDFDLGLNSLDYEVWLSNVSIGGAELAESTKLDKNGINYVDIPITFKPKDFGSALWDMI 263

Query: 580  RGRGTGYSIKGDIDVDTPFGAMKLPISKEGGTTSIKKNK 464
            RG+GTGYS+KG I+VDTPFGAMKLPISKEGGTT +KK+K
Sbjct: 264  RGKGTGYSMKGHINVDTPFGAMKLPISKEGGTTRLKKSK 302


>gb|ABK95225.1| unknown [Populus trichocarpa]
          Length = 314

 Score =  449 bits (1155), Expect = e-123
 Identities = 216/279 (77%), Positives = 248/279 (88%)
 Frame = -1

Query: 1300 GGFIDKVKDFIQNIGEKIEEAVGFGKPTADVTGIHIPSITLKKADIVVDVLVAXXXXXXX 1121
            GGFIDKVKDFIQ+IGEKIE A+GFGKPTADVT IH P+I L+KA+IVVDVL+        
Sbjct: 24   GGFIDKVKDFIQDIGEKIEGAIGFGKPTADVTEIHFPTINLEKAEIVVDVLIKNPNPVPI 83

Query: 1120 XXXXXNYLVESAGRKLVSGLIPDAGTIHAHGSETVKIPITLMYDDIKNTYDDIKPGSIIP 941
                 NYL+ES GRKL+SGLIPDAGTI AHG ETVKIPI L+YDDIKNTYDDIKPGSIIP
Sbjct: 84   PLIDINYLIESDGRKLISGLIPDAGTIRAHGEETVKIPIHLVYDDIKNTYDDIKPGSIIP 143

Query: 940  YKIKVELIVDVPIFGRLTLPLEKTGEIPIPYKPDVDVEKISFKKFSFEETVALLHLKLEN 761
            Y+IKV+ IVDVPIFGRLTLPLEKTGEIP+PYKPD+D+EKI F++FSFEETVA+LHLKLEN
Sbjct: 144  YRIKVDFIVDVPIFGRLTLPLEKTGEIPVPYKPDIDIEKIKFERFSFEETVAVLHLKLEN 203

Query: 760  MNDFDLGLNALSSEIWLSGVSIGGAKLTESSKIDKNGISYIDLPITFRPKDLGSAVWDMI 581
             NDFDLGLN+L  E+WLS VSIGGA+L ES+K+DKNGI+Y+D+PITF+PKD GSA+WDMI
Sbjct: 204  KNDFDLGLNSLDYEVWLSNVSIGGAELAESTKLDKNGINYVDIPITFKPKDFGSALWDMI 263

Query: 580  RGRGTGYSIKGDIDVDTPFGAMKLPISKEGGTTSIKKNK 464
            RG+GTGYS+KG I+VDTPFGAMKLPISKEGGTT +KK+K
Sbjct: 264  RGKGTGYSMKGHINVDTPFGAMKLPISKEGGTTRLKKSK 302


>emb|CBI24768.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score =  446 bits (1147), Expect = e-123
 Identities = 219/308 (71%), Positives = 258/308 (83%)
 Frame = -1

Query: 1387 GMSSSENPQXXXXXXXXXXXXXXXXXXXKGGFIDKVKDFIQNIGEKIEEAVGFGKPTADV 1208
            GMSSS+ P+                    GGFI+KVKDFI +IGEKIEEA+GFGKPTADV
Sbjct: 85   GMSSSDKPEEVVERDAKEKDDKNEEK---GGFIEKVKDFIHDIGEKIEEAIGFGKPTADV 141

Query: 1207 TGIHIPSITLKKADIVVDVLVAXXXXXXXXXXXXNYLVESAGRKLVSGLIPDAGTIHAHG 1028
            TGIHIP I L++ADIV+DVLV             +YL+ES GRKLVSGLIPDAGTI+AHG
Sbjct: 142  TGIHIPKINLERADIVIDVLVTNPNPIPIPLVDIDYLIESDGRKLVSGLIPDAGTINAHG 201

Query: 1027 SETVKIPITLMYDDIKNTYDDIKPGSIIPYKIKVELIVDVPIFGRLTLPLEKTGEIPIPY 848
            SETVKIP++L+YDDIKNTY DIKPGSIIPYKIKV LIVDVP+FGRLTLPLEKTGEIPIPY
Sbjct: 202  SETVKIPVSLIYDDIKNTYSDIKPGSIIPYKIKVNLIVDVPVFGRLTLPLEKTGEIPIPY 261

Query: 847  KPDVDVEKISFKKFSFEETVALLHLKLENMNDFDLGLNALSSEIWLSGVSIGGAKLTESS 668
            KPD+D+EK+ F+ FSFEETVA+LHLKL+N NDFDLGLN L  E+WL+ VSIGGA+L++S+
Sbjct: 262  KPDIDLEKVQFQSFSFEETVAVLHLKLDNKNDFDLGLNGLDYEVWLADVSIGGAELSKSA 321

Query: 667  KIDKNGISYIDLPITFRPKDLGSAVWDMIRGRGTGYSIKGDIDVDTPFGAMKLPISKEGG 488
            KI+KNGIS I+LPITFRP++ GSA+WDMIRG+GTGY++KG+IDVDTPFGAMKLPISKEGG
Sbjct: 322  KIEKNGISCIELPITFRPREFGSALWDMIRGKGTGYTMKGNIDVDTPFGAMKLPISKEGG 381

Query: 487  TTSIKKNK 464
            +T +KK+K
Sbjct: 382  STRLKKDK 389


>gb|AFK47398.1| unknown [Lotus japonicus]
          Length = 322

 Score =  445 bits (1144), Expect = e-122
 Identities = 215/279 (77%), Positives = 245/279 (87%)
 Frame = -1

Query: 1300 GGFIDKVKDFIQNIGEKIEEAVGFGKPTADVTGIHIPSITLKKADIVVDVLVAXXXXXXX 1121
            GGFI+KVKDFI +IGEKIEEA+GFGKPTADV+GIHIPSI + K D+VVDVL+        
Sbjct: 32   GGFIEKVKDFIHDIGEKIEEAIGFGKPTADVSGIHIPSINIHKVDLVVDVLIKNPNPVPI 91

Query: 1120 XXXXXNYLVESAGRKLVSGLIPDAGTIHAHGSETVKIPITLMYDDIKNTYDDIKPGSIIP 941
                 NYL+ES GRKLVSGLIPDAGTIHAHG ETVKIP+TL+YDDIK TY DIKPGSIIP
Sbjct: 92   PLIDINYLIESDGRKLVSGLIPDAGTIHAHGEETVKIPVTLIYDDIKQTYADIKPGSIIP 151

Query: 940  YKIKVELIVDVPIFGRLTLPLEKTGEIPIPYKPDVDVEKISFKKFSFEETVALLHLKLEN 761
            Y++KV+LI DVPI GRLTLPLEKTGEIPIPYKPD+DV+KI F+KFSFEET+A LHLKLEN
Sbjct: 152  YRVKVDLIFDVPILGRLTLPLEKTGEIPIPYKPDIDVDKIQFEKFSFEETIANLHLKLEN 211

Query: 760  MNDFDLGLNALSSEIWLSGVSIGGAKLTESSKIDKNGISYIDLPITFRPKDLGSAVWDMI 581
             NDFDLGLNAL  E+WL  VSIGGA+LT+S+K++K+GISYID+PITFRPKD GSA+WDMI
Sbjct: 212  KNDFDLGLNALDYEVWLGDVSIGGAQLTKSAKLEKSGISYIDVPITFRPKDFGSALWDMI 271

Query: 580  RGRGTGYSIKGDIDVDTPFGAMKLPISKEGGTTSIKKNK 464
            RGRGTGY++KG+IDVDTPFGAMKLPI KEGGTT +KK K
Sbjct: 272  RGRGTGYTMKGNIDVDTPFGAMKLPIIKEGGTTRLKKKK 310


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