BLASTX nr result

ID: Coptis23_contig00003274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003274
         (1491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243...   323   7e-86
emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]   315   2e-83
ref|XP_002523493.1| conserved hypothetical protein [Ricinus comm...   306   1e-80
ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211...   288   2e-75
ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like ...   258   2e-66

>ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
          Length = 519

 Score =  323 bits (828), Expect = 7e-86
 Identities = 221/458 (48%), Positives = 254/458 (55%), Gaps = 77/458 (16%)
 Frame = -2

Query: 1427 DDFLDQMLCNLPSWSDLHGNPNKSPWDLNPKPEXXXXXXNS----------------LQY 1296
            DDFL+QML  LPSWSDL  NP KSPW+LN           S                  +
Sbjct: 68   DDFLEQMLSTLPSWSDLPANP-KSPWELNASNPISMPSNKSRDLSDDTTPSNPDNVQFAF 126

Query: 1295 DESILLASRLRQHQITADSPTTKS--MXXXXXXXLRAAAGIGRSSNTTSGIGVDSSFLPI 1122
            DES +LAS+LRQHQI+ +S   KS  M        R  A +GRS +  SG G +S  L +
Sbjct: 127  DESAMLASKLRQHQISGNSSAAKSALMLQQQLLLSRGVA-MGRSPSNGSGAG-ESGLLQL 184

Query: 1121 PLTLGNGADT-----------------------DNSAPGLYNGFSNSL------PRPTQH 1029
            PL+L NG                          D S   LYNGF+ +L          Q+
Sbjct: 185  PLSLSNGDSCLVDRSQNDVVDGSSSFKSPNQGGDGSVQALYNGFAGALHGSGQASNQAQN 244

Query: 1028 FNHAQNGSISTQNFGAAATGMNQAVATGNSGGXXXXXXXXXXXXXXQATDPHSXXXXXXX 849
            F+H Q GS+  QN+GA AT MNQ  ATG++GG              QATDPHS       
Sbjct: 245  FHHPQGGSMQAQNYGAPATVMNQTPATGSAGGAPAQPRQRVRARRGQATDPHSIAERLRR 304

Query: 848  XXXXXRMKGLQELVPNANK------TDKASMLDEIIDYVKFLQLQVKV---------LSM 714
                 RMK LQELVPNANK      TDKASMLDEIIDYVKFLQLQVKV         LSM
Sbjct: 305  ERIAERMKALQELVPNANKVIHPTLTDKASMLDEIIDYVKFLQLQVKVFLTVVVVQVLSM 364

Query: 713  SRXXXXXXXXXXXADISTEGGADSIQTNGSGGRSSNGAQPVSVNDSLTVTENQVAKLMEE 534
            SR           AD+S+E    S  T   GGR++NG Q  + NDSLTVTE+QVAKLMEE
Sbjct: 365  SRLGGAAAVAPLVADMSSEASGTSGPT---GGRATNGTQTTTSNDSLTVTEHQVAKLMEE 421

Query: 533  DMGSAMQYLQGKGLCLMPISLASAISTATGHSRNP-------------KNNLTSPFL-CS 396
            DMGSAMQYLQGKGLCLMPISLA+AIST T HSRNP               + T P L  S
Sbjct: 422  DMGSAMQYLQGKGLCLMPISLATAISTTTCHSRNPMVAAAAVAASNINNGSHTHPLLPNS 481

Query: 395  NLDGPTSPSISVLTVQS-TMGNGIGEPSVRDATSVSKP 285
            N DGP+SPS+SVLTVQS TMGNG+ +  V+DA SVSKP
Sbjct: 482  NADGPSSPSMSVLTVQSATMGNGLADAPVKDAASVSKP 519


>emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
          Length = 486

 Score =  315 bits (807), Expect = 2e-83
 Identities = 209/426 (49%), Positives = 242/426 (56%), Gaps = 54/426 (12%)
 Frame = -2

Query: 1400 NLPSWS---DLHGNPNKSPWDLNPKPEXXXXXXNSLQYDESILLASRLRQHQITADSPTT 1230
            NLP  S    L   P+    DL+              +DES +LAS+LRQHQI+ +S   
Sbjct: 63   NLPGNSMLPTLISMPSNKSRDLSDDTTPSNPDNVQFAFDESAMLASKLRQHQISGNSSAA 122

Query: 1229 KS--MXXXXXXXLRAAAGIGRSSNTTSGIGVDSSFLPIPLTLGNGADT------------ 1092
            KS  M        R  A +GRS +  SG G +S  L +PL+L NG               
Sbjct: 123  KSALMLQQQLLLSRGVA-MGRSPSNGSGAG-ESGLLQLPLSLSNGDSCLVDRSQNDVVDG 180

Query: 1091 -----------DNSAPGLYNGF-------SNSLPRPTQHFNHAQNGSISTQNFGAAATGM 966
                       D S   LYNGF       S       Q+F+H Q GS+  QN+GA AT M
Sbjct: 181  SSSXKSPNQGGDGSVQALYNGFAPGALHGSGQASNQAQNFHHPQGGSMQAQNYGAPATVM 240

Query: 965  NQAVATGNSGGXXXXXXXXXXXXXXQATDPHSXXXXXXXXXXXXRMKGLQELVPNANKTD 786
            NQ  ATG++GG              QAT PHS            RMK LQELVPNANKTD
Sbjct: 241  NQTPATGSAGGAPAQPRQRVRARRGQATHPHSIAERLRRERIAERMKALQELVPNANKTD 300

Query: 785  KASMLDEIIDYVKFLQLQVKVLSMSRXXXXXXXXXXXADISTEGGADSIQTNG----SGG 618
            KASMLDEIIDYVKFLQLQVKVLSMSR           AD+S+EGG D IQ +G    +GG
Sbjct: 301  KASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSSEGGGDCIQASGTSGPTGG 360

Query: 617  RSSNGAQPVSVNDSLTVTENQVAKLMEEDMGSAMQYLQGKGLCLMPISLASAISTATGHS 438
            R++NG Q  + NDSLTVTE+QVAKLMEEDMGSAMQYLQGKGLCLMPISLA+AIST T HS
Sbjct: 361  RATNGTQTXTSNDSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTTTCHS 420

Query: 437  RNP-------------KNNLTSPFL-CSNLDGPTSPSISVLTVQS-TMGNGIGEPSVRDA 303
            RNP               + T P L  SN DGP+SPS+SVLTVQS TMGNG+ +  V+DA
Sbjct: 421  RNPMVAAAAVAASNINNGSHTHPLLPNSNADGPSSPSMSVLTVQSATMGNGLADAPVKDA 480

Query: 302  TSVSKP 285
             SVSKP
Sbjct: 481  ASVSKP 486


>ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
            gi|223537200|gb|EEF38832.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 474

 Score =  306 bits (783), Expect = 1e-80
 Identities = 215/431 (49%), Positives = 248/431 (57%), Gaps = 50/431 (11%)
 Frame = -2

Query: 1427 DDFLDQMLCNLPS--WSDLHGNPNKSPWDLN-------PKP-EXXXXXXNSL-------- 1302
            DDFL+QML  LPS  W+DL     KSPWDL        PKP +       SL        
Sbjct: 61   DDFLEQMLSTLPSCSWADL-----KSPWDLTTTANLNLPKPRDLSDETPPSLPDSNNNVG 115

Query: 1301 --QYDESILLASRLRQHQIT-----------ADSPTTKSMXXXXXXXLRAAAGIGRSSNT 1161
               +DES+LLAS+LRQHQI+           A +   K M         AA G       
Sbjct: 116  FHNFDESVLLASKLRQHQISGGGGGGGPSPAAAAAAAKLMLQQQLMMAAAARG------- 168

Query: 1160 TSGIGVDSSFLPIPLTLGNGADTDNSAPGLYNGFSNSLPRPT-----QHFNHAQNG--SI 1002
              G+G +            G   D S  GLYNGF       T     QHF+H Q G  ++
Sbjct: 169  --GLGQNDVLDGFKSPNQGG---DGSVQGLYNGFGTGSMHGTGQSSNQHFHHPQGGAAAM 223

Query: 1001 STQNFGA-AATGMNQAVATGNSGGXXXXXXXXXXXXXXQATDPHSXXXXXXXXXXXXRMK 825
              QNFG+     MNQ  A+G++GG              QATDPHS            RMK
Sbjct: 224  QAQNFGSPGGAMMNQPQASGSTGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMK 283

Query: 824  GLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRXXXXXXXXXXXADISTEGGAD 645
             LQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSR           ADIS+EGG D
Sbjct: 284  ALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADISSEGGGD 343

Query: 644  SIQTNGSGG-------RSSNGAQPVSVNDSLTVTENQVAKLMEEDMGSAMQYLQGKGLCL 486
             IQ N +G        R++N +Q  S NDSLTVTE+QVAKLMEEDMGSAMQYLQGKGLCL
Sbjct: 344  CIQANANGAAGNGSLPRANNSSQTPSSNDSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCL 403

Query: 485  MPISLASAISTATGHSRN-PKNNLTSP--FLCSNLDGPTSPSISVLTVQS-TMGNGIGEP 318
            MPISLA+AISTAT H+RN   N+L +P   L SN +GP+SPS+SVLTVQS T+GNG  +P
Sbjct: 404  MPISLATAISTATCHNRNTTTNSLLNPSRLLQSNGEGPSSPSMSVLTVQSATLGNGGLDP 463

Query: 317  SVRDATSVSKP 285
            SV+DA SVSKP
Sbjct: 464  SVKDAASVSKP 474


>ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
            gi|449529094|ref|XP_004171536.1| PREDICTED:
            uncharacterized protein LOC101228749 [Cucumis sativus]
          Length = 422

 Score =  288 bits (738), Expect = 2e-75
 Identities = 198/401 (49%), Positives = 236/401 (58%), Gaps = 20/401 (4%)
 Frame = -2

Query: 1427 DDFLDQMLCNLPS--WSDLHGNPNKSPWDLNP--KPEXXXXXXNSLQYDESILLASRLRQ 1260
            DDFL+QML  +PS  W DL+ +  KSPWDLNP  KP                 ++    Q
Sbjct: 54   DDFLEQMLNTIPSCSWPDLNPSNPKSPWDLNPINKPSRD--------------ISDDPHQ 99

Query: 1259 HQITADSPTTKSMXXXXXXXLRAAAGIGRSSNTTSGIGV-DSSFLPIPLTLGNGADTDNS 1083
            + +TA SP  K+        L     + R  + ++G GV D    P+PL+LGN AD D S
Sbjct: 100  NHLTATSPAAKAAVMLQQQLL-----LSRGMSGSAGNGVADHGLPPMPLSLGN-ADLDRS 153

Query: 1082 APGLYNGFSNSLPRPTQHFNHAQNGSISTQNFGAAATGMNQAVATGNSGGXXXXXXXXXX 903
               + +G   S  RP         GS+ + +FGA    MNQ    G++G           
Sbjct: 154  QNDVVDG---SCFRPPN-----SGGSLQSNSFGAPGNVMNQTPGGGSAGVSQSQPKQKVR 205

Query: 902  XXXXQATDPHSXXXXXXXXXXXXRMKGLQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 723
                QATDPHS            RMK LQELVPNANKTDKASMLDEIIDYVKFLQLQVKV
Sbjct: 206  ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 265

Query: 722  LSMSRXXXXXXXXXXXADISTEGGADSIQTNGS--GGRSSN-----GAQPVSVNDSLTVT 564
            LSMSR           AD+S+EGG + +Q +G+  GGR+SN     G Q  S NDS+TVT
Sbjct: 266  LSMSRLGGAAAVAPLVADVSSEGGGECMQGSGAQAGGRNSNNNGNGGNQTASTNDSMTVT 325

Query: 563  ENQVAKLMEEDMGSAMQYLQGKGLCLMPISLASAISTATGHSRNPKNN-------LTSPF 405
            E QVAKLME+DMGSAMQYLQGKGLCLMPISLA+AIST+T HSRNP  N          P 
Sbjct: 326  EQQVAKLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCHSRNPLMNGGGGGGGSQHPV 385

Query: 404  LCSNLDGPTSPSISVLTVQST-MGNGIGEPSVRDATSVSKP 285
            + SN +GP+SPS+SVLTVQST MGNG    SV+DA SVSKP
Sbjct: 386  MGSNGEGPSSPSMSVLTVQSTSMGNG----SVKDAASVSKP 422


>ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
          Length = 452

 Score =  258 bits (660), Expect = 2e-66
 Identities = 201/444 (45%), Positives = 239/444 (53%), Gaps = 60/444 (13%)
 Frame = -2

Query: 1436 TPPDDFLDQMLCNLPSWSDLHGN------PNKSPWDLNPKPEXXXXXXNS--------LQ 1299
            T  DDFL+QML +  SW+DL+ N      PN +P D+ P  E      N           
Sbjct: 26   TSHDDFLEQMLSSC-SWTDLNHNKPLLWDPN-TPNDIKPPDETTPSNNNDDATANVVFPS 83

Query: 1298 YDESILLASRLRQHQITADSPTTKSMXXXXXXXLRAAAGIGRSSNTTSGIGVDSSFLPIP 1119
            +DE   LAS+ R HQI+ ++    +          AAA              DS  L +P
Sbjct: 84   FDEHSTLASKFRNHQISPNNAPKNA----------AAAAFMLQHQLLR----DSGLLNMP 129

Query: 1118 LTLGNGADTDNSA-----PG-------LYNGFSNSL------PRPTQHFNHAQNGS--IS 999
            L+L      D S+     PG       LYNGF+ SL         TQHF + Q  S  + 
Sbjct: 130  LSLPGNDVVDASSFKSPNPGGEASVQALYNGFAGSLHGAGQSSNQTQHFQNPQGSSNPMQ 189

Query: 998  TQNFGAAATG----MNQAVATGNS-GGXXXXXXXXXXXXXXQATDPHSXXXXXXXXXXXX 834
             QNFGAA  G     NQA  +G + GG              QATDPHS            
Sbjct: 190  GQNFGAAPAGGGGATNQAPGSGAAAGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAE 249

Query: 833  RMKGLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRXXXXXXXXXXXADISTEG 654
            RMK LQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSR           AD+ +EG
Sbjct: 250  RMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMYSEG 309

Query: 653  GADSIQTNGS---GGR---SSNGAQPVSV---NDSLTVTENQVAKLMEEDMGSAMQYLQG 501
            G D IQ NG+   GG    +SN  Q  +    NDSLT+TE+QVAKLMEEDMGSAMQYLQG
Sbjct: 310  GGDCIQANGNSNGGGAHAPNSNTNQTSATTPSNDSLTMTEHQVAKLMEEDMGSAMQYLQG 369

Query: 500  KGLCLMPISLASAISTATGHSRNPKNNLTSPFLCSNL------------DGPTSPSISVL 357
            KGLCLMPISLA+AISTAT H+RN   N+ +P + +              DGP+SPS+SVL
Sbjct: 370  KGLCLMPISLATAISTATCHTRNVTVNV-NPLINAAAAAQIPTAANPAGDGPSSPSMSVL 428

Query: 356  TVQSTMGNGIGEPSVRDATSVSKP 285
            TVQS +    G  +V+DA SVSKP
Sbjct: 429  TVQSAVAVNDGSAAVKDAASVSKP 452


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