BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003256
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002335728.1| predicted protein [Populus trichocarpa] gi|2...    65   1e-09
gb|AAA84682.1| unknown protein (chloroplast) [Nicotiana tabacum]...    64   4e-08

>ref|XP_002335728.1| predicted protein [Populus trichocarpa] gi|222834616|gb|EEE73079.1|
           predicted protein [Populus trichocarpa]
          Length = 79

 Score = 64.7 bits (156), Expect(2) = 1e-09
 Identities = 39/69 (56%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
 Frame = -3

Query: 611 KNSMISSRTKHESFDSFGSHA---QLLMGHSHIPFFFYVMXXXXXXXXXXXXXXLIVDPR 441
           K SMI SRTKHESFDSFGSHA   QLLMG+SH+ F +                 LI +PR
Sbjct: 11  KTSMIPSRTKHESFDSFGSHAQLVQLLMGNSHLFFDWNEPILFSRFIIRIPKPKLITNPR 70

Query: 440 LEYSEDSSD 414
            EYSEDSSD
Sbjct: 71  PEYSEDSSD 79



 Score = 24.3 bits (51), Expect(2) = 1e-09
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = -1

Query: 640 MKVDYLSIHLK 608
           MKVDYLSIH K
Sbjct: 1   MKVDYLSIHCK 11


>gb|AAA84682.1| unknown protein (chloroplast) [Nicotiana tabacum]
           gi|224352|prf||1102209F ORF 6
          Length = 79

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 37/71 (52%), Positives = 44/71 (61%)
 Frame = -3

Query: 614 FKNSMISSRTKHESFDSFGSHAQLLMGHSHIPFFFYVMXXXXXXXXXXXXXXLIVDPRLE 435
           F+NS+I SRTKHESFDSFGSHAQLL  +SHI  FFY                +  +   +
Sbjct: 10  FQNSIIPSRTKHESFDSFGSHAQLLKVNSHI--FFYECNEPIFSSLFIFQKDIETNVIPK 67

Query: 434 YSEDSSDQTKN 402
           YSEDSSD+ KN
Sbjct: 68  YSEDSSDKIKN 78