BLASTX nr result

ID: Coptis23_contig00003253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003253
         (3049 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274657.1| PREDICTED: probable LRR receptor-like serine...   456   e-125
ref|XP_004156667.1| PREDICTED: probable LRR receptor-like serine...   440   e-120
ref|XP_004137905.1| PREDICTED: probable LRR receptor-like serine...   440   e-120
ref|XP_002882598.1| kinase family protein [Arabidopsis lyrata su...   436   e-119
ref|NP_566341.1| protein kinase domain-containing protein [Arabi...   436   e-119

>ref|XP_002274657.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g53430 [Vitis vinifera] gi|297740219|emb|CBI30401.3|
            unnamed protein product [Vitis vinifera]
          Length = 380

 Score =  456 bits (1173), Expect = e-125
 Identities = 226/358 (63%), Positives = 280/358 (78%)
 Frame = +2

Query: 23   EDITPDNVRVFPYKVLKSATGNFHPSNXXXXXXXXXXXXXXXXDGTQVAVKTLSVESDQG 202
            E+I  +NVR+F Y  L+SAT NFHPS+                DGTQVA+K LS ES QG
Sbjct: 24   EEIATNNVRLFSYNSLRSATNNFHPSSRVGGGGFGVVYRGVLRDGTQVAIKCLSAESKQG 83

Query: 203  TREFLTEINMISSVRHPNLVRLIGCCIEGRDRMLVYEYMENNSLASVLLGPTNKRIALDW 382
            T+EFLTEINMIS++RHPNLV LIGCCIEG +R+LVYEY+ENNS+AS++LG   K + LDW
Sbjct: 84   TQEFLTEINMISNIRHPNLVELIGCCIEGSNRILVYEYLENNSIASIILGSKGKHVILDW 143

Query: 383  SKRVSICLGTAQGLAFLHEEAKPHIVHRDIKASNILIDRDWNPKIGDFGLAKLFPDNVTH 562
              RVSIC+GTA GLA+LHEEA+PHIVHRDIKASN+L+D  + PKIGDFGLAKLFPDNVTH
Sbjct: 144  PTRVSICMGTASGLAYLHEEAEPHIVHRDIKASNVLLDGSFLPKIGDFGLAKLFPDNVTH 203

Query: 563  VSTRVAGTVGYLAPEYALLGQLTRKADIYSYGVLILEIISGRGSSNSAWGDDMMFLLEWT 742
            VSTRVAGTVGYLAPEYALLGQLT+KAD+YS+GVL+LEIISGR SS +A+G++++ L+EWT
Sbjct: 204  VSTRVAGTVGYLAPEYALLGQLTKKADVYSFGVLMLEIISGRSSSKAAFGEELLVLVEWT 263

Query: 743  WKLRDEDNLLDVVDPELIEYPVDEMLRFIKVALFCTQAASQHRPSMKQVVEMLSKEVDLD 922
            WKL++E+ LL++VDPEL +YP DEM+RFIKVALFCTQAAS  RP+MK VV+MLSK+V L+
Sbjct: 264  WKLKEEERLLEIVDPELTDYPEDEMMRFIKVALFCTQAASHQRPNMKLVVDMLSKDVILN 323

Query: 923  VKMLTKPDVYKXXXXXXXXXXXXXXXPSQGREGKKTKLRILPTRMMKSFASMTQLQPR 1096
             K+LT+P VYK                SQG +GK++    + +  + S  S+TQ+ PR
Sbjct: 324  EKVLTRPGVYKGRPTHHVESSPQESSSSQGNKGKQSINPSVSSTSLGS-QSVTQMLPR 380


>ref|XP_004156667.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g53430-like [Cucumis sativus]
          Length = 383

 Score =  440 bits (1132), Expect = e-120
 Identities = 220/355 (61%), Positives = 268/355 (75%), Gaps = 2/355 (0%)
 Frame = +2

Query: 38   DNVRVFPYKVLKSATGNFHPSNXXXXXXXXXXXXXXXXDGTQVAVKTLSVESDQGTREFL 217
            +NVR+F Y  L+SAT NFHPS+                DGT VA+K+LS ES QGTREFL
Sbjct: 29   NNVRIFSYNSLRSATRNFHPSSRIGAGGYGVVYKGVLRDGTNVAIKSLSAESTQGTREFL 88

Query: 218  TEINMISSVRHPNLVRLIGCCIEGRDRMLVYEYMENNSLASVLLGPTNKRIALDWSKRVS 397
            TEINMIS++RH NLV+LIGCCIEG  R+LVYEY+ENNSLAS LLG  +K + LDW KR  
Sbjct: 89   TEINMISNIRHQNLVQLIGCCIEGTHRILVYEYLENNSLASTLLGTMSKHVDLDWPKRAK 148

Query: 398  ICLGTAQGLAFLHEEAKPHIVHRDIKASNILIDRDWNPKIGDFGLAKLFPDNVTHVSTRV 577
            ICLGTA GLAFLHE+A+P +VHRDIKASNIL+DR+++PKIGDFGLAKLFPDNVTHVSTRV
Sbjct: 149  ICLGTALGLAFLHEDAEPSVVHRDIKASNILLDRNFDPKIGDFGLAKLFPDNVTHVSTRV 208

Query: 578  AGTVGYLAPEYALLGQLTRKADIYSYGVLILEIISGRGSSNSAWGDDMMFLLEWTWKLRD 757
            AGTVGYLAPEYALLGQLT+KAD+YS+GVL+LE++SG  SS +A+G+++  L+EWTWKL+ 
Sbjct: 209  AGTVGYLAPEYALLGQLTKKADVYSFGVLMLEVVSGSSSSKTAFGEELSILVEWTWKLKQ 268

Query: 758  EDNLLDVVDPELIEYPVDEMLRFIKVALFCTQAASQHRPSMKQVVEMLSKEVDLDVKMLT 937
            E  L++++DPELI+YP  E++RFI VALFCTQAA+  RPSMKQVVEMLS+EV L+ K+LT
Sbjct: 269  EGRLVELIDPELIDYPKAEVMRFITVALFCTQAAANQRPSMKQVVEMLSREVHLNEKLLT 328

Query: 938  KPDVYK--XXXXXXXXXXXXXXXPSQGREGKKTKLRILPTRMMKSFASMTQLQPR 1096
            +P +YK                  S G  GKK       +    S  SMTQ+ PR
Sbjct: 329  EPGIYKGHKISKLNGAGTSSEGTSSHGHRGKKVIKSATSSPQFNSSNSMTQMLPR 383


>ref|XP_004137905.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g53430-like [Cucumis sativus]
          Length = 383

 Score =  440 bits (1132), Expect = e-120
 Identities = 220/355 (61%), Positives = 268/355 (75%), Gaps = 2/355 (0%)
 Frame = +2

Query: 38   DNVRVFPYKVLKSATGNFHPSNXXXXXXXXXXXXXXXXDGTQVAVKTLSVESDQGTREFL 217
            +NVR+F Y  L+SAT NFHPS+                DGT VA+K+LS ES QGTREFL
Sbjct: 29   NNVRIFSYNSLRSATRNFHPSSRIGAGGYGVVYKGVLRDGTNVAIKSLSAESTQGTREFL 88

Query: 218  TEINMISSVRHPNLVRLIGCCIEGRDRMLVYEYMENNSLASVLLGPTNKRIALDWSKRVS 397
            TEINMIS++RH NLV+LIGCCIEG  R+LVYEY+ENNSLAS LLG  +K + LDW KR  
Sbjct: 89   TEINMISNIRHQNLVQLIGCCIEGTHRILVYEYLENNSLASTLLGTMSKHVDLDWPKRAK 148

Query: 398  ICLGTAQGLAFLHEEAKPHIVHRDIKASNILIDRDWNPKIGDFGLAKLFPDNVTHVSTRV 577
            ICLGTA GLAFLHE+A+P +VHRDIKASNIL+DR+++PKIGDFGLAKLFPDNVTHVSTRV
Sbjct: 149  ICLGTALGLAFLHEDAEPSVVHRDIKASNILLDRNFDPKIGDFGLAKLFPDNVTHVSTRV 208

Query: 578  AGTVGYLAPEYALLGQLTRKADIYSYGVLILEIISGRGSSNSAWGDDMMFLLEWTWKLRD 757
            AGTVGYLAPEYALLGQLT+KAD+YS+GVL+LE++SG  SS +A+G+++  L+EWTWKL+ 
Sbjct: 209  AGTVGYLAPEYALLGQLTKKADVYSFGVLMLEVVSGSSSSKTAFGEELSILVEWTWKLKQ 268

Query: 758  EDNLLDVVDPELIEYPVDEMLRFIKVALFCTQAASQHRPSMKQVVEMLSKEVDLDVKMLT 937
            E  L++++DPELI+YP  E++RFI VALFCTQAA+  RPSMKQVVEMLS+EV L+ K+LT
Sbjct: 269  EGRLVELIDPELIDYPKAEVMRFITVALFCTQAAANQRPSMKQVVEMLSREVHLNEKLLT 328

Query: 938  KPDVYK--XXXXXXXXXXXXXXXPSQGREGKKTKLRILPTRMMKSFASMTQLQPR 1096
            +P +YK                  S G  GKK       +    S  SMTQ+ PR
Sbjct: 329  EPGIYKGHKISKLNGAGTSSEGTSSHGHRGKKVIKSATSSPQFNSSNSMTQMLPR 383


>ref|XP_002882598.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328438|gb|EFH58857.1| kinase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 393

 Score =  436 bits (1121), Expect = e-119
 Identities = 212/312 (67%), Positives = 257/312 (82%), Gaps = 1/312 (0%)
 Frame = +2

Query: 23  EDITPDNVRVFPYKVLKSATGNFHPSNXXXXXXXXXXXXXXXXDGTQVAVKTLSVESDQG 202
           E+I  +NVRVF Y  L+SAT  FHP+                 DGTQVAVK+LS ES QG
Sbjct: 24  EEICTNNVRVFSYNSLRSATDGFHPTKRIGGGGYGVVFKGVLRDGTQVAVKSLSAESKQG 83

Query: 203 TREFLTEINMISSVRHPNLVRLIGCCIEGRDRMLVYEYMENNSLASVLLGPTNKRIALDW 382
           TREFLTEIN+IS++ HPNLV LIGCCIEG +R+LVYEY+ENNSLASVLLG  ++ + LDW
Sbjct: 84  TREFLTEINLISNIHHPNLVNLIGCCIEGNNRILVYEYLENNSLASVLLGSRSRYVPLDW 143

Query: 383 SKRVSICLGTAQGLAFLHEEAKPHIVHRDIKASNILIDRDWNPKIGDFGLAKLFPDNVTH 562
           SKR +IC+GTA GLAFLHEE +PH+VHRDIKASNIL+DR+++PKIGDFGLAKLFPDNVTH
Sbjct: 144 SKRAAICVGTASGLAFLHEEVEPHVVHRDIKASNILLDRNFSPKIGDFGLAKLFPDNVTH 203

Query: 563 VSTRVAGTVGYLAPEYALLGQLTRKADIYSYGVLILEIISGRGSSNSAWGDDMMFLLEWT 742
           VSTRVAGTVGYLAPEYALLGQLT+KAD+YS+G+L+LE+ISG  S+ +A+GDD M L+EW 
Sbjct: 204 VSTRVAGTVGYLAPEYALLGQLTKKADVYSFGILVLEVISGNSSTRAAFGDDYMVLVEWV 263

Query: 743 WKLRDEDNLLDVVDPELIEYPVDEMLRFIKVALFCTQAASQHRPSMKQVVEML-SKEVDL 919
           WKLR+E  LL+ VDP+L ++P DE+ RFIKVALFCTQAA+Q RP+MKQVVEML  KE++L
Sbjct: 264 WKLREEKRLLECVDPDLTKFPEDEVTRFIKVALFCTQAAAQKRPNMKQVVEMLCRKELNL 323

Query: 920 DVKMLTKPDVYK 955
           +   LT+P VY+
Sbjct: 324 NEDALTEPGVYR 335


>ref|NP_566341.1| protein kinase domain-containing protein [Arabidopsis thaliana]
           gi|21537226|gb|AAM61567.1| putative receptor ser thr
           protein kinase [Arabidopsis thaliana]
           gi|332641187|gb|AEE74708.1| protein kinase
           domain-containing protein [Arabidopsis thaliana]
          Length = 393

 Score =  436 bits (1121), Expect = e-119
 Identities = 211/312 (67%), Positives = 259/312 (83%), Gaps = 1/312 (0%)
 Frame = +2

Query: 23  EDITPDNVRVFPYKVLKSATGNFHPSNXXXXXXXXXXXXXXXXDGTQVAVKTLSVESDQG 202
           E+I  +NVRVF Y  L+SAT +FHP+N                DGTQVAVK+LS ES QG
Sbjct: 24  EEICTNNVRVFSYNSLRSATDSFHPTNRIGGGGYGVVFKGVLRDGTQVAVKSLSAESKQG 83

Query: 203 TREFLTEINMISSVRHPNLVRLIGCCIEGRDRMLVYEYMENNSLASVLLGPTNKRIALDW 382
           TREFLTEIN+IS++ HPNLV+LIGCCIEG +R+LVYEY+ENNSLASVLLG  ++ + LDW
Sbjct: 84  TREFLTEINLISNIHHPNLVKLIGCCIEGNNRILVYEYLENNSLASVLLGSRSRYVPLDW 143

Query: 383 SKRVSICLGTAQGLAFLHEEAKPHIVHRDIKASNILIDRDWNPKIGDFGLAKLFPDNVTH 562
           SKR +IC+GTA GLAFLHEE +PH+VHRDIKASNIL+D +++PKIGDFGLAKLFPDNVTH
Sbjct: 144 SKRAAICVGTASGLAFLHEEVEPHVVHRDIKASNILLDSNFSPKIGDFGLAKLFPDNVTH 203

Query: 563 VSTRVAGTVGYLAPEYALLGQLTRKADIYSYGVLILEIISGRGSSNSAWGDDMMFLLEWT 742
           VSTRVAGTVGYLAPEYALLGQLT+KAD+YS+G+L+LE+ISG  S+ +A+GD+ M L+EW 
Sbjct: 204 VSTRVAGTVGYLAPEYALLGQLTKKADVYSFGILVLEVISGNSSTRAAFGDEYMVLVEWV 263

Query: 743 WKLRDEDNLLDVVDPELIEYPVDEMLRFIKVALFCTQAASQHRPSMKQVVEML-SKEVDL 919
           WKLR+E  LL+ VDPEL ++P DE+ RFIKVALFCTQAA+Q RP+MKQV+EML  KE++L
Sbjct: 264 WKLREERRLLECVDPELTKFPADEVTRFIKVALFCTQAAAQKRPNMKQVMEMLRRKELNL 323

Query: 920 DVKMLTKPDVYK 955
           +   LT+P VY+
Sbjct: 324 NEDALTEPGVYR 335


Top