BLASTX nr result

ID: Coptis23_contig00003252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003252
         (996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35339.3| unnamed protein product [Vitis vinifera]              413   e-113
ref|XP_002271050.1| PREDICTED: uncharacterized protein LOC100262...   413   e-113
ref|XP_002316425.1| predicted protein [Populus trichocarpa] gi|2...   405   e-111
ref|XP_004147093.1| PREDICTED: uncharacterized protein LOC101211...   404   e-110
ref|XP_003521213.1| PREDICTED: uncharacterized protein LOC100779...   396   e-108

>emb|CBI35339.3| unnamed protein product [Vitis vinifera]
          Length = 328

 Score =  413 bits (1062), Expect = e-113
 Identities = 199/239 (83%), Positives = 218/239 (91%)
 Frame = +1

Query: 1   GSGTSARSRRLVKVREDKRKREYERTHKYPAWAKVLEDACKHDAELRAVLGDSIGNPELM 180
           GSGT+AR RRL+K+RE+KRKREY+R H YPAWAKV+EDACK D+ELRAVLGDSIGNPELM
Sbjct: 93  GSGTTARGRRLLKLREEKRKREYDRLHNYPAWAKVMEDACKDDSELRAVLGDSIGNPELM 152

Query: 181 KQMXXXXXXXXXXXXDFLSKSKTGSVLAFKVSFRDFNPINSYIWFELYGSPTDRDVDLIG 360
           ++             DF  KSKTGSVLA+KVSFRDFNP++SYIWFELYGSP+DRDVDLIG
Sbjct: 153 RKRVEERVRKKGR--DF-RKSKTGSVLAYKVSFRDFNPVDSYIWFELYGSPSDRDVDLIG 209

Query: 361 SVIQSWYVMGRLGAFNSSNLQLANSSMEHNPIYDADKGFKVMPSSFHDIGDVEFQDNWGR 540
           SVIQSWYVMGRLGAFNSSNLQLANSSME+NP+YDADKGFK+MPSSFHDIGDVEFQDNWGR
Sbjct: 210 SVIQSWYVMGRLGAFNSSNLQLANSSMEYNPLYDADKGFKLMPSSFHDIGDVEFQDNWGR 269

Query: 541 VWVDLGTSDIFAVDVLLNCLTVLSSEYLGIQQMVFGGRRMGDWEEGMTNPEYGYKYFKI 717
           VWVDLGTSD FA+DVLLNCLTVLSSEYLGIQQ+VFGGR MGDWEEGMT+PEYGYKYFKI
Sbjct: 270 VWVDLGTSDFFAIDVLLNCLTVLSSEYLGIQQVVFGGRNMGDWEEGMTSPEYGYKYFKI 328


>ref|XP_002271050.1| PREDICTED: uncharacterized protein LOC100262808 [Vitis vinifera]
          Length = 297

 Score =  413 bits (1062), Expect = e-113
 Identities = 199/239 (83%), Positives = 218/239 (91%)
 Frame = +1

Query: 1   GSGTSARSRRLVKVREDKRKREYERTHKYPAWAKVLEDACKHDAELRAVLGDSIGNPELM 180
           GSGT+AR RRL+K+RE+KRKREY+R H YPAWAKV+EDACK D+ELRAVLGDSIGNPELM
Sbjct: 62  GSGTTARGRRLLKLREEKRKREYDRLHNYPAWAKVMEDACKDDSELRAVLGDSIGNPELM 121

Query: 181 KQMXXXXXXXXXXXXDFLSKSKTGSVLAFKVSFRDFNPINSYIWFELYGSPTDRDVDLIG 360
           ++             DF  KSKTGSVLA+KVSFRDFNP++SYIWFELYGSP+DRDVDLIG
Sbjct: 122 RKRVEERVRKKGR--DF-RKSKTGSVLAYKVSFRDFNPVDSYIWFELYGSPSDRDVDLIG 178

Query: 361 SVIQSWYVMGRLGAFNSSNLQLANSSMEHNPIYDADKGFKVMPSSFHDIGDVEFQDNWGR 540
           SVIQSWYVMGRLGAFNSSNLQLANSSME+NP+YDADKGFK+MPSSFHDIGDVEFQDNWGR
Sbjct: 179 SVIQSWYVMGRLGAFNSSNLQLANSSMEYNPLYDADKGFKLMPSSFHDIGDVEFQDNWGR 238

Query: 541 VWVDLGTSDIFAVDVLLNCLTVLSSEYLGIQQMVFGGRRMGDWEEGMTNPEYGYKYFKI 717
           VWVDLGTSD FA+DVLLNCLTVLSSEYLGIQQ+VFGGR MGDWEEGMT+PEYGYKYFKI
Sbjct: 239 VWVDLGTSDFFAIDVLLNCLTVLSSEYLGIQQVVFGGRNMGDWEEGMTSPEYGYKYFKI 297


>ref|XP_002316425.1| predicted protein [Populus trichocarpa] gi|222865465|gb|EEF02596.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score =  405 bits (1041), Expect = e-111
 Identities = 193/238 (81%), Positives = 213/238 (89%)
 Frame = +1

Query: 4   SGTSARSRRLVKVREDKRKREYERTHKYPAWAKVLEDACKHDAELRAVLGDSIGNPELMK 183
           SGT+AR RRL+KVREDKRKREY+R H YPAWAKVLEDACK D ELRA+LGDSIGNPELM+
Sbjct: 10  SGTTARGRRLLKVREDKRKREYDRLHNYPAWAKVLEDACKSDEELRALLGDSIGNPELMR 69

Query: 184 QMXXXXXXXXXXXXDFLSKSKTGSVLAFKVSFRDFNPINSYIWFELYGSPTDRDVDLIGS 363
           Q                 KSKTGSV++FKVSFRDFNPI+SYIWFE YGSP+D+DVD+IG+
Sbjct: 70  QRVEDRVRKKGRSN--FHKSKTGSVVSFKVSFRDFNPIDSYIWFEFYGSPSDQDVDIIGT 127

Query: 364 VIQSWYVMGRLGAFNSSNLQLANSSMEHNPIYDADKGFKVMPSSFHDIGDVEFQDNWGRV 543
           VIQSWY+MGRLGAFNSSNLQLANSSME++P+YDADKGFKVMPSSFHDI DVEFQDNWGRV
Sbjct: 128 VIQSWYLMGRLGAFNSSNLQLANSSMEYDPLYDADKGFKVMPSSFHDISDVEFQDNWGRV 187

Query: 544 WVDLGTSDIFAVDVLLNCLTVLSSEYLGIQQMVFGGRRMGDWEEGMTNPEYGYKYFKI 717
           WVDLGTSD FA+DVLLNCLTVLSSEYLGIQQ+VFGGRR+GDWEEGMTNPEYGYKYFK+
Sbjct: 188 WVDLGTSDFFAIDVLLNCLTVLSSEYLGIQQVVFGGRRIGDWEEGMTNPEYGYKYFKV 245


>ref|XP_004147093.1| PREDICTED: uncharacterized protein LOC101211689 [Cucumis sativus]
          Length = 310

 Score =  404 bits (1038), Expect = e-110
 Identities = 198/238 (83%), Positives = 215/238 (90%)
 Frame = +1

Query: 4   SGTSARSRRLVKVREDKRKREYERTHKYPAWAKVLEDACKHDAELRAVLGDSIGNPELMK 183
           SGTSARSRRL+K+RE+KRKRE++R H YPAWAKVLEDACK+DAELRAVLGDSIGNPE M+
Sbjct: 76  SGTSARSRRLLKLREEKRKREHDRLHNYPAWAKVLEDACKNDAELRAVLGDSIGNPEEMR 135

Query: 184 QMXXXXXXXXXXXXDFLSKSKTGSVLAFKVSFRDFNPINSYIWFELYGSPTDRDVDLIGS 363
           +             DF  KSKTGS+LAFKVSFRDFNP++SYIWFEL GSPTDRDVDLIGS
Sbjct: 136 KKVEERVRRKGR--DF-QKSKTGSILAFKVSFRDFNPLDSYIWFELIGSPTDRDVDLIGS 192

Query: 364 VIQSWYVMGRLGAFNSSNLQLANSSMEHNPIYDADKGFKVMPSSFHDIGDVEFQDNWGRV 543
           VIQSWYVMGRLGAFNSSNLQLANSSME+NP+YDADKGFKVM SSFHDI DVEFQDNWGRV
Sbjct: 193 VIQSWYVMGRLGAFNSSNLQLANSSMEYNPVYDADKGFKVMQSSFHDISDVEFQDNWGRV 252

Query: 544 WVDLGTSDIFAVDVLLNCLTVLSSEYLGIQQMVFGGRRMGDWEEGMTNPEYGYKYFKI 717
           WVDLGTSD FA+DVLLNCLTVLSSEYLGIQQ+VFGGRRMGDWEEGMT+P+YGYK FKI
Sbjct: 253 WVDLGTSDYFAIDVLLNCLTVLSSEYLGIQQVVFGGRRMGDWEEGMTSPDYGYKSFKI 310


>ref|XP_003521213.1| PREDICTED: uncharacterized protein LOC100779006 [Glycine max]
          Length = 304

 Score =  396 bits (1018), Expect = e-108
 Identities = 189/239 (79%), Positives = 217/239 (90%)
 Frame = +1

Query: 1   GSGTSARSRRLVKVREDKRKREYERTHKYPAWAKVLEDACKHDAELRAVLGDSIGNPELM 180
           GSGT+AR RRL+++R++KR+REY+R + YPAWAKVLE+ACK DAELRAVLGDSIGNPELM
Sbjct: 69  GSGTTARDRRLLRIRQEKRQREYDRLNNYPAWAKVLENACKDDAELRAVLGDSIGNPELM 128

Query: 181 KQMXXXXXXXXXXXXDFLSKSKTGSVLAFKVSFRDFNPINSYIWFELYGSPTDRDVDLIG 360
           ++             DF  KSKTGSVLAFKV+FRDFNP++SYIWFEL+GSP+DRDV+LIG
Sbjct: 129 RKRVEDRVRKKGR--DF-QKSKTGSVLAFKVTFRDFNPLDSYIWFELFGSPSDRDVNLIG 185

Query: 361 SVIQSWYVMGRLGAFNSSNLQLANSSMEHNPIYDADKGFKVMPSSFHDIGDVEFQDNWGR 540
           +VIQSWYVMGRLGAFNSSNLQLANSS+E++P+YDADKGFKVMPSSFHDI D+EFQ+NWGR
Sbjct: 186 NVIQSWYVMGRLGAFNSSNLQLANSSVEYDPLYDADKGFKVMPSSFHDISDIEFQENWGR 245

Query: 541 VWVDLGTSDIFAVDVLLNCLTVLSSEYLGIQQMVFGGRRMGDWEEGMTNPEYGYKYFKI 717
           VWVDLGTSD FA+DVLLNCLT LSSEYLGIQQ+VFGGRRMGDWEEGMT+PEYGYKYFKI
Sbjct: 246 VWVDLGTSDYFAIDVLLNCLTALSSEYLGIQQIVFGGRRMGDWEEGMTSPEYGYKYFKI 304


Top