BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003249
         (1610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   183   1e-43
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   134   9e-29
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   130   1e-27
emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]   127   6e-27
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   127   8e-27

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  183 bits (465), Expect = 1e-43
 Identities = 126/395 (31%), Positives = 195/395 (49%), Gaps = 12/395 (3%)
 Frame = +2

Query: 83   LLFTAIRMEDIKNWSEAPQEVLGLIAEHLNSIEDYIRFGAVCRSWQSVTVDQRRYNFSPK 262
            L+   I    + +WS+ P + L LIAE L+S+EDY+RFG VC+SW S+  D+     S K
Sbjct: 909  LIIQKINQTVMADWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSSK 968

Query: 263  TLPWMMFPFYEKGEVDNNYSGSHKFYSLSEGVHKLYLPEAINCSCLGSPYGWLIIRGNQ- 439
            + PW+M    E  E+   YS       LS  V+++ LPE +   C GSPYGWL+  G   
Sbjct: 969  S-PWLMLAEKENSEIRGFYS------PLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDL 1021

Query: 440  RMEILNPLSRVSFLLPPISM---LEDFVGSDPSYCTNSTHLVILPSSSSTVPLKELFVTF 610
             M +LNPL+RV  LLP +     L   + S  +  + S  + I  +  S+ P        
Sbjct: 1022 DMCLLNPLTRVQILLPSLRACPNLNTLIDSS-TQGSRSKDIFIYKAVLSSAPSSPDCAVM 1080

Query: 611  VLFCEDGKLAFARPTDRAWTTMKISNTSHKDILLFNNKFYIVDTEGVLWCFDIT----RR 778
            +++ + G+LAF +P  + WT ++  +    DI+ FN  F  V+    +W  DI+    + 
Sbjct: 1081 IIYSDYGRLAFTKPGHQTWTLLESESGPVDDIIYFNGSFLAVNLSWEVWICDISGSQLKT 1140

Query: 779  VGIEIALPPKDIED-ECRNLYLVELLGDLHMVVKFFSYEPEPVXXXXXXXXXXXXXXXFK 955
            +    A   +D+++ E    YLVE  G+++MV +        +               F 
Sbjct: 1141 IRFAAAPALQDVDEIEYEAKYLVESGGEIYMVTR-------NLYDTARRDIPYMRTWTFS 1193

Query: 956  VFKLDFGSKKWEEVHTLGDYALFVGLNTSFSILVSDHPEC-KGSVFFTDHDAEYLQ-SWG 1129
            V KLD  +K+WEEV  L   + F+G N SFS   SD+PE  K S++FTD    +L     
Sbjct: 1194 VLKLDMCNKRWEEVENLDHCSFFLGNNHSFSTWASDYPEFRKNSIYFTDDYCGFLNIPRN 1253

Query: 1130 FYMGTFNLETKTLQLFYENGD-FCWNTCPVWIMPN 1231
            F MG +N +   ++ +    D     + P+WI P+
Sbjct: 1254 FDMGIYNFQNTQIEHYPVGHDALSMFSAPLWIRPS 1288


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  134 bits (336), Expect = 9e-29
 Identities = 109/405 (26%), Positives = 179/405 (44%), Gaps = 34/405 (8%)
 Frame = +2

Query: 119  NWSEAPQEVLGLIAEHLNSIEDYIRFGAVCRSWQSVTVDQRRYNFSPKTLPWMMFPFYEK 298
            +W++ P E++ +I++ +    DY+ F AVC +W+S     +  N  P  LPW++ P    
Sbjct: 4    DWTQLPPELIEIISKKITIYSDYLHFQAVCHAWKSSI--PKTPNHLPPQLPWLLLP---- 57

Query: 299  GEVDNNYSGSHKFYSLSE-GVHKLYLPEAINCSC-LGSPYGWLIIRGNQ-RMEILNPLSR 469
             +  +N S    F++LS    H L LPEA +     GS +GWLII  +   + ++NPL+R
Sbjct: 58   -QSQSNQSSYRAFFNLSTYKFHSLNLPEASHRKKHCGSSHGWLIILDDSPSILVINPLTR 116

Query: 470  VSFLLPPISMLEDFVGSDPSYCTNSTHLVILPSSSSTVPLKEL----------------- 598
                LP IS   + V  D +       LV      +T  L+++                 
Sbjct: 117  RKIHLPAISSFPNVVSFDYANVGREYLLVNPQGERNTASLRQMRDGFIKKVVMSSSPLEK 176

Query: 599  ----FVTFVLFCEDGKLAFARPTDRAWTTMKISNTSHKDILLFNNKFYIVDTEGVLWCFD 766
                FV   + C  G LA+ +  D  W  ++ S +  +D++ FN  FY V+  G +   D
Sbjct: 177  KGDFFVAMAILCSTGDLAYCKNGDECWNIVENSRSFSEDVIYFNGLFYAVNKAGQIVVCD 236

Query: 767  IT-RRVGIEIALPPKDIEDECRNLYLVELLGDLHMVVKFFSYEPEPVXXXXXXXXXXXXX 943
            +      +     P+ I  + +  YLV     L +V ++   + E               
Sbjct: 237  VNGNSPKVSFIETPRQIGGDMQ--YLVSSGDGLLLVTRYLDLDVE-------FDIFIYKT 287

Query: 944  XXFKVFKLDFGSKKWEEVHTLGDYALFVGLNTSFSILVSDHPECKGS-VFFTDHDA--EY 1114
              F+VFKLD    +WE V +LGD  LF+G N+S ++  S    C G  +++TD  +   Y
Sbjct: 288  ARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANNY 347

Query: 1115 LQSWGFY-MGTFNLETKTLQLF--YENGDFC---WNTCPVWIMPN 1231
                G + +G F L   +++    Y    +    W   P+WI PN
Sbjct: 348  DGHIGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQWPP-PLWISPN 391


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  130 bits (326), Expect = 1e-27
 Identities = 110/405 (27%), Positives = 188/405 (46%), Gaps = 32/405 (7%)
 Frame = +2

Query: 113  IKNWSEAPQEVLGLIAEHLNSIEDYIRFGAVCRSWQSVTVDQRRYNFSPKTLPWMMFPFY 292
            I +WS+ P E++ +I++ L    DY+   AVC +W+      +  N  P  LPW+M P  
Sbjct: 2    IMDWSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFSI--PKTPNHLPPQLPWLMLP-- 57

Query: 293  EKGEVDNNYSGSHKFYSLSEG-VHKLYLPE-AINCSCLGSPYGWLIIRGNQ-RMEILNPL 463
             + +  +N S    F+SLS    H L LPE +      GS +GWL+I  +   + ++NPL
Sbjct: 58   -QSQSQSNQS-RRAFFSLSTNKFHFLNLPEVSYRKRHCGSSHGWLMILDDTPTILLINPL 115

Query: 464  SRVSFLLPPISMLEDFVGSDPSYCTNSTHLVILPSSSSTVPLKEL--------------- 598
            +R    LPP+S   + +  + S       L  L     TV L+++               
Sbjct: 116  TRAKLSLPPLSSFPNVISFNYSDIGREYALRNLLGERVTVSLRQMRDSFIRKVVLSSSPL 175

Query: 599  ----FVTFVLFCEDGKLAFARPTDRAWTTMKISNTSHKDILLFNNKFYIVDTEGVLWCFD 766
                FV   +  +   LA+ R  D++W+ ++ + +  +D++  N  FY V+  G +   D
Sbjct: 176  KDNNFVVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIVICD 235

Query: 767  ITR-RVGIEIALPPKDIEDECRNLYLVELLGDLHMVVKFFSYEPEPVXXXXXXXXXXXXX 943
            I+     +     P+    + +  YLV    +L +V ++   E E               
Sbjct: 236  ISSDSPRVSFMETPRQAGGDMQ--YLVNSGDELLLVTRYLDLEYE-FDHPDMEPHLIYRT 292

Query: 944  XXFKVFKLDFGSKKWEEVHTLGDYALFVGLNTSFSILVSDHPECKGS-VFFTDH--DAEY 1114
              F+VF+LD+   +W  + TLGD ALF+G N+S S+  +D   C G+ +++TD   DA Y
Sbjct: 293  IRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDANY 352

Query: 1115 LQSWGFY-MGTFNLETKTLQ---LFYEN--GDFCWNTCPVWIMPN 1231
               +G + +G F L  +T++    +  N      W+  P+W+ PN
Sbjct: 353  DGHFGDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSP-PLWVSPN 396


>emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]
          Length = 394

 Score =  127 bits (320), Expect = 6e-27
 Identities = 113/400 (28%), Positives = 173/400 (43%), Gaps = 27/400 (6%)
 Frame = +2

Query: 119  NWSEAPQEVLGLIAEHLNSIEDYIRFGAVCRSWQSVTVDQRRYNFSP--KTLPWMMFPFY 292
            +WS+ P+E++ LI + L    D IRFG VCR W  V ++ R+  F P     P ++ P  
Sbjct: 5    DWSKLPKELIELIFDELQHAGDIIRFGTVCRFWGLVALEARQQVFKPLRPLSPMLLLP-- 62

Query: 293  EKGEVDNNYSGSHKFYS-LSEGVHKLYLPEAINCSCLGSPYGWLI-IRGNQRMEI--LNP 460
                  N   G+HK Y    +  +K+ +P   +  C  S  GWLI I      EI  LNP
Sbjct: 63   -----PNKDDGAHKLYDFFKKKAYKIQIPAMRDKWCCNSWNGWLITINHTFPYEICCLNP 117

Query: 461  LSRVSFLLPPISMLEDFVGS-DPSYCTNSTHLVILPSSSSTVPLKELFVTFVLFCEDGKL 637
            +S V   LPP    ED     D +      + V+L S+ S  P     V   +     KL
Sbjct: 118  ISGVQIDLPPAITFEDSPPDLDETPIEFFLNKVVLSSTPS--PSNANCVIMAIHSNYNKL 175

Query: 638  AFARPTDRAWTTMKISNTSHKDILLFNNKFYIVDTEGVLWCFDITRRVGIEIALPPKDIE 817
            AF +P D+ W T+K  +  +KD+L + + FY +    V+ C        I  AL PK   
Sbjct: 176  AFCKPGDKRWITLKSEDIQYKDLLYYKDNFYAIGRSKVVQCDIGDDPRVIPFALLPKMGY 235

Query: 818  DECRNLYLVELLGDLHMVVKFF----------------SYEPEPVXXXXXXXXXXXXXXX 949
             + R  YLVE  G L  V+++                  ++   +               
Sbjct: 236  FQYR--YLVESSGCLLYVLRYMDLKDNEDPLKLRYETTGFKVFDLDSDKRKFSYRYETTT 293

Query: 950  FKVFKLDFGSKKWEEVHTLGDYALFVGLNTSFSILVSDHPECKGS-VFFTDHDAE--YLQ 1120
            FKV+  DF  KKW+ +  + + AL +G N + SI        K + ++F D   E  +  
Sbjct: 294  FKVYNFDFDQKKWKLIKNIKEKALLLGHNQAISISTKKFDGFKSNHIYFLDDYKEGYFEN 353

Query: 1121 SWGFY-MGTFNLETKTLQLFYENGDFCWNTCPVWIMPNLS 1237
            ++G + MG FN++T   +  +      W +   W+ P LS
Sbjct: 354  TYGCHDMGVFNIKTHLFKPIFHRTQL-WASPLFWMRPELS 392


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  127 bits (319), Expect = 8e-27
 Identities = 115/401 (28%), Positives = 188/401 (46%), Gaps = 30/401 (7%)
 Frame = +2

Query: 119  NWSEAPQEVLGLIAEHLNSIEDYIRFGAVCRSWQSVTVDQRRYNFSPKTLPWMMFPFYEK 298
            +WS+   E+L  IA+      DY+RF AVC +W++ +V +  ++  P  LPW+M P  + 
Sbjct: 3    DWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRA-SVPKTPHHL-PTQLPWLMLPQSQP 60

Query: 299  GEVDNNYSGSHKFYSLS-EGVHKLYLPEAINCSCL-GSPYGWLIIRGNQ-RMEILNPLSR 469
                  +     F+SLS    H L LPEA +     GS +GWL+I      + +LNPL+R
Sbjct: 61   ------HHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTR 114

Query: 470  VSFLLPPISMLEDFVGSDPSYCTNSTHLVILPSSSSTVPLKEL----------------- 598
                LPP+S   + V  + +       L        T  LK++                 
Sbjct: 115  SKVHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANG 174

Query: 599  --FVTFVLFCEDGKLAFARPTDRAWTTMKISNTSHKDILLFNNKFYIVDTEGVLWCFDIT 772
              F+  V+  + G LA  R +D +WT ++ + +  +D++     FY V+  G +   D++
Sbjct: 175  SDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVS 234

Query: 773  -RRVGIEIALPPKDIEDECRNLYLVELLGDLHMVVKFF--SYEPEPVXXXXXXXXXXXXX 943
                 + I   P+    + +  YLVE   +L +V ++   +Y+ EP              
Sbjct: 235  GSSPRVSIIEMPQQFGGDLQ--YLVESGEELLLVTRYLDLTYDVEP-----DQTSLIYRT 287

Query: 944  XXFKVFKLDFGSKKWEEVHTLGDYALFVGLNTSFSILVSDHPECKGS-VFFTDHDAE--Y 1114
              F+V +LD  + +WE V +LGD ALF+G N S S+   D P CKG+ +++TD  +E  Y
Sbjct: 288  TRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNY 347

Query: 1115 LQSWGFY-MGTFNLETKTLQ-LFYENGDFCWNTCPVWIMPN 1231
                G   +G FNLE  +++ L   +    W   P+W+ PN
Sbjct: 348  DGIGGEQDLGIFNLEDGSIEPLPCSHFRIRWPP-PLWVTPN 387