BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003243
         (1973 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28722.3| unnamed protein product [Vitis vinifera]              395   e-107
ref|XP_003632339.1| PREDICTED: pentatricopeptide repeat-containi...   395   e-107
ref|XP_002306785.1| predicted protein [Populus trichocarpa] gi|2...   367   6e-99
ref|XP_002524751.1| pentatricopeptide repeat-containing protein,...   365   2e-98
ref|XP_004146992.1| PREDICTED: pentatricopeptide repeat-containi...   360   1e-96

>emb|CBI28722.3| unnamed protein product [Vitis vinifera]
          Length = 1361

 Score =  395 bits (1014), Expect = e-107
 Identities = 196/267 (73%), Positives = 219/267 (82%)
 Frame = +1

Query: 1    IDEMHFAGIRTGSSVYSALLKAYCKENQPLEISSLLRDARKEGIQLDSSCYEALIQSRVL 180
            +DEM  AG+RTGSSVYS+LLKAYCK N+  EI+SLLRDARK G+QLDSSCYEALIQSRVL
Sbjct: 1088 LDEMRLAGVRTGSSVYSSLLKAYCKANRAGEITSLLRDARKAGVQLDSSCYEALIQSRVL 1147

Query: 181  QQDTQGALHLFKEMKETKISKTCHEEFDMLVKGCAESGEAGMFAKLLQEIKEGQRADCGV 360
            Q+DT+GALH+FKEMKE KI ++ H EF+MLVKGCAESGEAG+ AKLL EIKE QR DCGV
Sbjct: 1148 QKDTEGALHVFKEMKEAKIPRSGHREFEMLVKGCAESGEAGLMAKLLHEIKEEQRVDCGV 1207

Query: 361  HEWNSVIHFFCKKRLMQDAEKALKKMRALGHTPNAQTFHSLVTGYAAIGGKYIEVTELWG 540
            H+WN+VIHFFC+KRLMQDAEKALKKMR+LGH PNAQTFHS+VTGYAAIGGKY+EVTELWG
Sbjct: 1208 HDWNNVIHFFCRKRLMQDAEKALKKMRSLGHAPNAQTFHSMVTGYAAIGGKYVEVTELWG 1267

Query: 541  EMXXXXXXXXXXXXXXXXXXXXXXXXXXXFVRGGFFLRANEVVEKMEAGDMFIYKYKYRT 720
            EM                           FVRGGFF+RANEVVE ME G MFI KYKYRT
Sbjct: 1268 EM-----KSFASSSSMKFDQELLDAVLYTFVRGGFFVRANEVVEMMERGKMFIDKYKYRT 1322

Query: 721  IFLKYHKTLYKKKNPKVQTEAQFKRRE 801
            +FLKYHKTLYK K PKVQTEAQF+RR+
Sbjct: 1323 LFLKYHKTLYKSKPPKVQTEAQFRRRD 1349


>ref|XP_003632339.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
            mitochondrial-like [Vitis vinifera]
          Length = 784

 Score =  395 bits (1014), Expect = e-107
 Identities = 196/267 (73%), Positives = 219/267 (82%)
 Frame = +1

Query: 1    IDEMHFAGIRTGSSVYSALLKAYCKENQPLEISSLLRDARKEGIQLDSSCYEALIQSRVL 180
            +DEM  AG+RTGSSVYS+LLKAYCK N+  EI+SLLRDARK G+QLDSSCYEALIQSRVL
Sbjct: 511  LDEMRLAGVRTGSSVYSSLLKAYCKANRAGEITSLLRDARKAGVQLDSSCYEALIQSRVL 570

Query: 181  QQDTQGALHLFKEMKETKISKTCHEEFDMLVKGCAESGEAGMFAKLLQEIKEGQRADCGV 360
            Q+DT+GALH+FKEMKE KI ++ H EF+MLVKGCAESGEAG+ AKLL EIKE QR DCGV
Sbjct: 571  QKDTEGALHVFKEMKEAKIPRSGHREFEMLVKGCAESGEAGLMAKLLHEIKEEQRVDCGV 630

Query: 361  HEWNSVIHFFCKKRLMQDAEKALKKMRALGHTPNAQTFHSLVTGYAAIGGKYIEVTELWG 540
            H+WN+VIHFFC+KRLMQDAEKALKKMR+LGH PNAQTFHS+VTGYAAIGGKY+EVTELWG
Sbjct: 631  HDWNNVIHFFCRKRLMQDAEKALKKMRSLGHAPNAQTFHSMVTGYAAIGGKYVEVTELWG 690

Query: 541  EMXXXXXXXXXXXXXXXXXXXXXXXXXXXFVRGGFFLRANEVVEKMEAGDMFIYKYKYRT 720
            EM                           FVRGGFF+RANEVVE ME G MFI KYKYRT
Sbjct: 691  EM-----KSFASSSSMKFDQELLDAVLYTFVRGGFFVRANEVVEMMERGKMFIDKYKYRT 745

Query: 721  IFLKYHKTLYKKKNPKVQTEAQFKRRE 801
            +FLKYHKTLYK K PKVQTEAQF+RR+
Sbjct: 746  LFLKYHKTLYKSKPPKVQTEAQFRRRD 772


>ref|XP_002306785.1| predicted protein [Populus trichocarpa] gi|222856234|gb|EEE93781.1|
            predicted protein [Populus trichocarpa]
          Length = 750

 Score =  367 bits (942), Expect = 6e-99
 Identities = 185/267 (69%), Positives = 211/267 (79%)
 Frame = +1

Query: 1    IDEMHFAGIRTGSSVYSALLKAYCKENQPLEISSLLRDARKEGIQLDSSCYEALIQSRVL 180
            +DEM  AGIRT SSVY++LLKAYCK NQ  E+++LLRDAR+ GIQLDSS Y ALI+ RV+
Sbjct: 477  LDEMCLAGIRTSSSVYASLLKAYCKANQTGEVTALLRDARRAGIQLDSSSYNALIEFRVI 536

Query: 181  QQDTQGALHLFKEMKETKISKTCHEEFDMLVKGCAESGEAGMFAKLLQEIKEGQRADCGV 360
            Q+DT+ ALH+FKEMKE KI +T H+EF+MLVKGCAE GEAG+ AKLLQEIKE Q AD GV
Sbjct: 537  QKDTKEALHIFKEMKEAKIPRTGHQEFEMLVKGCAEGGEAGLMAKLLQEIKEEQAADSGV 596

Query: 361  HEWNSVIHFFCKKRLMQDAEKALKKMRALGHTPNAQTFHSLVTGYAAIGGKYIEVTELWG 540
            H+WN+VIHFFCKKRLMQDAEKALKKMR+LGH PNAQTFHS+VTGYAAIGGKYIEVTELWG
Sbjct: 597  HDWNNVIHFFCKKRLMQDAEKALKKMRSLGHAPNAQTFHSMVTGYAAIGGKYIEVTELWG 656

Query: 541  EMXXXXXXXXXXXXXXXXXXXXXXXXXXXFVRGGFFLRANEVVEKMEAGDMFIYKYKYRT 720
            EM                           FVRGGFF RANEVV+ ME G MFI KYKYRT
Sbjct: 657  EM-----KSIASATSMKFDQELLDSVLYTFVRGGFFSRANEVVDMMEKGKMFIDKYKYRT 711

Query: 721  IFLKYHKTLYKKKNPKVQTEAQFKRRE 801
            ++LKYHKTLYK K PK+QTE+  K+RE
Sbjct: 712  LYLKYHKTLYKGKTPKIQTESLVKKRE 738


>ref|XP_002524751.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223535935|gb|EEF37594.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 787

 Score =  365 bits (938), Expect = 2e-98
 Identities = 182/267 (68%), Positives = 211/267 (79%)
 Frame = +1

Query: 1    IDEMHFAGIRTGSSVYSALLKAYCKENQPLEISSLLRDARKEGIQLDSSCYEALIQSRVL 180
            +DEM  AG+R  SSVY++LLKAYCK N+  E+ +LLRDARK GIQLDSSCY ALI+SRVL
Sbjct: 514  LDEMRVAGVRMSSSVYASLLKAYCKANRAGEVKALLRDARKAGIQLDSSCYGALIKSRVL 573

Query: 181  QQDTQGALHLFKEMKETKISKTCHEEFDMLVKGCAESGEAGMFAKLLQEIKEGQRADCGV 360
            ++DTQGALHLFKEMK+ KI +  ++EF+MLVKGCA+ GEAG+ AKLL+EI+EGQ  D GV
Sbjct: 574  EEDTQGALHLFKEMKDAKIPRAGNQEFEMLVKGCADDGEAGLLAKLLREIREGQTVDSGV 633

Query: 361  HEWNSVIHFFCKKRLMQDAEKALKKMRALGHTPNAQTFHSLVTGYAAIGGKYIEVTELWG 540
            H+WN VIHFFCKKRLMQDAEKALKKMR+LGH PNAQTFHS+VTGYAAIGGKY+EVTELWG
Sbjct: 634  HDWNYVIHFFCKKRLMQDAEKALKKMRSLGHAPNAQTFHSMVTGYAAIGGKYVEVTELWG 693

Query: 541  EMXXXXXXXXXXXXXXXXXXXXXXXXXXXFVRGGFFLRANEVVEKMEAGDMFIYKYKYRT 720
            EM                           FVRGGFF RANEVV  ME  +MFI KYKYRT
Sbjct: 694  EM-----KSIASATSMKFDQELLDSVLYTFVRGGFFSRANEVVAMMEKVEMFIDKYKYRT 748

Query: 721  IFLKYHKTLYKKKNPKVQTEAQFKRRE 801
            +FLKYHKTLYK K+PK+QTEAQ ++RE
Sbjct: 749  LFLKYHKTLYKGKSPKIQTEAQARKRE 775


>ref|XP_004146992.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
            mitochondrial-like [Cucumis sativus]
            gi|449503826|ref|XP_004162196.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g03100,
            mitochondrial-like [Cucumis sativus]
          Length = 796

 Score =  360 bits (923), Expect = 1e-96
 Identities = 181/267 (67%), Positives = 207/267 (77%)
 Frame = +1

Query: 1    IDEMHFAGIRTGSSVYSALLKAYCKENQPLEISSLLRDARKEGIQLDSSCYEALIQSRVL 180
            +DEMH AG+RTGSSVY +LLKAYCK N+  E++SLLRDARK GIQLDSSCY+ALI SRVL
Sbjct: 523  LDEMHLAGVRTGSSVYGSLLKAYCKANRTREVASLLRDARKAGIQLDSSCYDALINSRVL 582

Query: 181  QQDTQGALHLFKEMKETKISKTCHEEFDMLVKGCAESGEAGMFAKLLQEIKEGQRADCGV 360
            Q D +GAL  F+EMKE KI ++ H+EF  LV+  AE+ EAG+ AKLLQEIK+GQR D G+
Sbjct: 583  QNDNKGALKFFQEMKEAKIPRSGHQEFRRLVEKSAENDEAGLMAKLLQEIKDGQRVDYGL 642

Query: 361  HEWNSVIHFFCKKRLMQDAEKALKKMRALGHTPNAQTFHSLVTGYAAIGGKYIEVTELWG 540
            H+WN+VIHFFCKKRLMQDAEKALKKMR+LGH PNAQTFHS+VTGYAAIGGKY+EVTELWG
Sbjct: 643  HDWNNVIHFFCKKRLMQDAEKALKKMRSLGHCPNAQTFHSMVTGYAAIGGKYVEVTELWG 702

Query: 541  EMXXXXXXXXXXXXXXXXXXXXXXXXXXXFVRGGFFLRANEVVEKMEAGDMFIYKYKYRT 720
            EM                           FVRGGFF RANEVVE ME   MFI KYKYRT
Sbjct: 703  EM-----KSIASASFLKFDQELLDSVLYTFVRGGFFARANEVVEVMEKDKMFIDKYKYRT 757

Query: 721  IFLKYHKTLYKKKNPKVQTEAQFKRRE 801
            +FLKYH+TLYK K PK QTEAQ ++RE
Sbjct: 758  LFLKYHRTLYKGKAPKFQTEAQLRKRE 784