BLASTX nr result

ID: Coptis23_contig00003240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003240
         (1259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36259.3| unnamed protein product [Vitis vinifera]              426   e-117
ref|XP_002324285.1| predicted protein [Populus trichocarpa] gi|2...   422   e-115
gb|AAM29178.1| biostress-resistance-related protein [Triticum ae...   419   e-115
ref|XP_002285335.1| PREDICTED: acyl-protein thioesterase 2 [Viti...   417   e-114
dbj|BAJ86349.1| predicted protein [Hordeum vulgare subsp. vulgar...   417   e-114

>emb|CBI36259.3| unnamed protein product [Vitis vinifera]
          Length = 292

 Score =  426 bits (1094), Expect = e-117
 Identities = 200/273 (73%), Positives = 233/273 (85%), Gaps = 1/273 (0%)
 Frame = -3

Query: 1011 LF*FIAIIAFTSTVIRAAAMSFTNPSMGSGSRVAR-TFQFGRTHVVKPKGKHQATIVWLH 835
            LF FI I    + + R+  MS++N SMGSGSR AR TF+FGRTHVV+PKGKHQATIVWLH
Sbjct: 17   LFIFITIGGLFTALARSVTMSYSNHSMGSGSRTARRTFEFGRTHVVRPKGKHQATIVWLH 76

Query: 834  GLGDNGASWSQILETLPLPNIKWICPTAPTQPVAIFGGFPATAWFDVGDLSEDGPDDVEG 655
            GLGDNG+SWSQ+LE LPLPNIKWICPTAPT+PVA+ GGFP TAWFDVG+LS+DGPDD++G
Sbjct: 77   GLGDNGSSWSQLLENLPLPNIKWICPTAPTRPVAVLGGFPCTAWFDVGELSDDGPDDLDG 136

Query: 654  LDASAAHAAQLLSTEPEDIKLGIGGFSMGAATALYSATCCAQGKYGNGNPYPVNFAAVVG 475
            LDASAAH A LLSTEP D+KLG+GGFSMGAATALYSATC AQ KYGN +PYPVN  AVVG
Sbjct: 137  LDASAAHIANLLSTEPADVKLGVGGFSMGAATALYSATCYAQAKYGNNSPYPVNLKAVVG 196

Query: 474  LSGWLPCARGLKNKIEGSQEATTRASSLPLLLCHGKGDDVVLHKHGERSSEVLKSAGFQN 295
            LSGWLP +R L+NKIEGS EA  RA+SLP++LCHG  DDVV + +GERS+  L SAGF+ 
Sbjct: 197  LSGWLPGSRSLRNKIEGSHEAARRAASLPIMLCHGMNDDVVAYNYGERSAHCLSSAGFRY 256

Query: 294  LTFKSYSGLGHYTVPEEINEVCNWLSARLELDG 196
            LTFK+Y GLGHYTVP+E++EVC WL+ARL L+G
Sbjct: 257  LTFKAYDGLGHYTVPKEMDEVCTWLTARLGLEG 289


>ref|XP_002324285.1| predicted protein [Populus trichocarpa] gi|222865719|gb|EEF02850.1|
           predicted protein [Populus trichocarpa]
          Length = 257

 Score =  422 bits (1084), Expect = e-115
 Identities = 193/254 (75%), Positives = 224/254 (88%), Gaps = 1/254 (0%)
 Frame = -3

Query: 954 MSFTNPSMGSGSR-VARTFQFGRTHVVKPKGKHQATIVWLHGLGDNGASWSQILETLPLP 778
           MS+   ++GSGSR   RTF+FGRTHVV+PKGKHQATIVWLHGLGD G+SWSQ+LETLPLP
Sbjct: 1   MSYNTSAVGSGSRNTTRTFEFGRTHVVRPKGKHQATIVWLHGLGDKGSSWSQLLETLPLP 60

Query: 777 NIKWICPTAPTQPVAIFGGFPATAWFDVGDLSEDGPDDVEGLDASAAHAAQLLSTEPEDI 598
           NIKWICPTAPT+PVAIFGGFP TAWFDVGD+SED PDD+EGL+ASA H A LLSTEP DI
Sbjct: 61  NIKWICPTAPTRPVAIFGGFPCTAWFDVGDISEDAPDDLEGLEASATHVANLLSTEPADI 120

Query: 597 KLGIGGFSMGAATALYSATCCAQGKYGNGNPYPVNFAAVVGLSGWLPCARGLKNKIEGSQ 418
           KLG+GGFSMGAATALYSATC   G+YGNGN YP+N  AVVGLSGWLPC+R L+++IE S 
Sbjct: 121 KLGVGGFSMGAATALYSATCHVLGQYGNGNQYPINLTAVVGLSGWLPCSRTLRSRIERSD 180

Query: 417 EATTRASSLPLLLCHGKGDDVVLHKHGERSSEVLKSAGFQNLTFKSYSGLGHYTVPEEIN 238
           EA  RA+SLP+LLCHG GDDVV HKHGE+S++ L SAGF+NLTF+SY+GLGHYT+PEE++
Sbjct: 181 EAARRAASLPILLCHGSGDDVVAHKHGEKSAQALSSAGFRNLTFRSYNGLGHYTIPEEMD 240

Query: 237 EVCNWLSARLELDG 196
           EVC+WL+ RL LDG
Sbjct: 241 EVCHWLTTRLGLDG 254


>gb|AAM29178.1| biostress-resistance-related protein [Triticum aestivum]
          Length = 324

 Score =  419 bits (1078), Expect = e-115
 Identities = 204/275 (74%), Positives = 225/275 (81%), Gaps = 9/275 (3%)
 Frame = -3

Query: 999 IAIIAFTSTVIR-----AAAMSFTNPSMGSGSRVA----RTFQFGRTHVVKPKGKHQATI 847
           I  +A  S V R     AAA +    S G  S VA    R F++GRTHVV+PKG H+ATI
Sbjct: 44  IGFVALASVVARRGGVPAAAATVRGMSFGGASSVAAGGKRPFEYGRTHVVRPKGAHKATI 103

Query: 846 VWLHGLGDNGASWSQILETLPLPNIKWICPTAPTQPVAIFGGFPATAWFDVGDLSEDGPD 667
           VWLHGLGDNGASWSQ+LETLPLPNIKWICPTAPT+PVAIFGGFP+TAWFDV DLSED PD
Sbjct: 104 VWLHGLGDNGASWSQLLETLPLPNIKWICPTAPTRPVAIFGGFPSTAWFDVADLSEDSPD 163

Query: 666 DVEGLDASAAHAAQLLSTEPEDIKLGIGGFSMGAATALYSATCCAQGKYGNGNPYPVNFA 487
           DVEGLD+SAAH A LLSTEP DIKLG+GGFSMGAATALYS TC A GKYGNGNPYPVN +
Sbjct: 164 DVEGLDSSAAHVANLLSTEPADIKLGVGGFSMGAATALYSGTCFAHGKYGNGNPYPVNLS 223

Query: 486 AVVGLSGWLPCARGLKNKIEGSQEATTRASSLPLLLCHGKGDDVVLHKHGERSSEVLKSA 307
             VGLSGWLPCAR LKNKIE SQEA  +ASSLPL+LCHGK DDVVL+KHGERS++ LKS 
Sbjct: 224 VAVGLSGWLPCARSLKNKIESSQEAAQKASSLPLMLCHGKADDVVLYKHGERSADALKST 283

Query: 306 GFQNLTFKSYSGLGHYTVPEEINEVCNWLSARLEL 202
           GF N+ FKSYS LGHYTVPEE++EV  WL+A LEL
Sbjct: 284 GFANVEFKSYSRLGHYTVPEEMDEVVKWLTASLEL 318


>ref|XP_002285335.1| PREDICTED: acyl-protein thioesterase 2 [Vitis vinifera]
          Length = 257

 Score =  417 bits (1073), Expect = e-114
 Identities = 194/254 (76%), Positives = 224/254 (88%), Gaps = 1/254 (0%)
 Frame = -3

Query: 954 MSFTNPSMGSGSRVAR-TFQFGRTHVVKPKGKHQATIVWLHGLGDNGASWSQILETLPLP 778
           MS++N SMGSGSR AR TF+FGRTHVV+PKGKHQATIVWLHGLGDNG+SWSQ+LE LPLP
Sbjct: 1   MSYSNHSMGSGSRTARRTFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLENLPLP 60

Query: 777 NIKWICPTAPTQPVAIFGGFPATAWFDVGDLSEDGPDDVEGLDASAAHAAQLLSTEPEDI 598
           NIKWICPTAPT+PVA+ GGFP TAWFDVG+LS+DGPDD++GLDASAAH A LLSTEP D+
Sbjct: 61  NIKWICPTAPTRPVAVLGGFPCTAWFDVGELSDDGPDDLDGLDASAAHIANLLSTEPADV 120

Query: 597 KLGIGGFSMGAATALYSATCCAQGKYGNGNPYPVNFAAVVGLSGWLPCARGLKNKIEGSQ 418
           KLG+GGFSMGAATALYSATC AQ KYGN +PYPVN  AVVGLSGWLP +R L+NKIEGS 
Sbjct: 121 KLGVGGFSMGAATALYSATCYAQAKYGNNSPYPVNLKAVVGLSGWLPGSRSLRNKIEGSH 180

Query: 417 EATTRASSLPLLLCHGKGDDVVLHKHGERSSEVLKSAGFQNLTFKSYSGLGHYTVPEEIN 238
           EA  RA+SLP++LCHG  DDVV + +GERS+  L SAGF+ LTFK+Y GLGHYTVP+E++
Sbjct: 181 EAARRAASLPIMLCHGMNDDVVAYNYGERSAHCLSSAGFRYLTFKAYDGLGHYTVPKEMD 240

Query: 237 EVCNWLSARLELDG 196
           EVC WL+ARL L+G
Sbjct: 241 EVCTWLTARLGLEG 254


>dbj|BAJ86349.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326524496|dbj|BAK00631.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 280

 Score =  417 bits (1071), Expect = e-114
 Identities = 199/258 (77%), Positives = 219/258 (84%), Gaps = 4/258 (1%)
 Frame = -3

Query: 963 AAAMSFTNPSMGSGSRVA----RTFQFGRTHVVKPKGKHQATIVWLHGLGDNGASWSQIL 796
           AAA +    S G  S VA    R F++GRTHVV+PKG H+ATIVWLHGLGDNGASWSQ+L
Sbjct: 17  AAAATVRGMSFGGASSVAAGAKRPFEYGRTHVVRPKGAHKATIVWLHGLGDNGASWSQLL 76

Query: 795 ETLPLPNIKWICPTAPTQPVAIFGGFPATAWFDVGDLSEDGPDDVEGLDASAAHAAQLLS 616
           ETLPLPNIKWICPTAPT+PVAIFGGFP+TAWFDV DLSED PDDVEGLD+SAAH A LLS
Sbjct: 77  ETLPLPNIKWICPTAPTRPVAIFGGFPSTAWFDVADLSEDSPDDVEGLDSSAAHVANLLS 136

Query: 615 TEPEDIKLGIGGFSMGAATALYSATCCAQGKYGNGNPYPVNFAAVVGLSGWLPCARGLKN 436
           TEP DIKLG+GGFSMGAATALYS TC A GKYGNGNPYPVN +  VGLSGWLPCAR LKN
Sbjct: 137 TEPADIKLGVGGFSMGAATALYSGTCFAHGKYGNGNPYPVNLSVAVGLSGWLPCARSLKN 196

Query: 435 KIEGSQEATTRASSLPLLLCHGKGDDVVLHKHGERSSEVLKSAGFQNLTFKSYSGLGHYT 256
           KIE SQEA  +ASSLPL+LCHGK DDVVL+KHGERS++ LKS GF N+ FKSYS LGHYT
Sbjct: 197 KIESSQEAAQKASSLPLMLCHGKADDVVLYKHGERSADALKSTGFANVEFKSYSRLGHYT 256

Query: 255 VPEEINEVCNWLSARLEL 202
           VPEE++EV  WL+A LEL
Sbjct: 257 VPEEMDEVVKWLTASLEL 274


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