BLASTX nr result

ID: Coptis23_contig00003237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003237
         (1461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278752.2| PREDICTED: uncharacterized membrane protein ...   643   0.0  
ref|XP_002305383.1| predicted protein [Populus trichocarpa] gi|2...   613   e-173
ref|XP_002269926.1| PREDICTED: uncharacterized membrane protein ...   608   e-171
ref|XP_002522488.1| conserved hypothetical protein [Ricinus comm...   605   e-170
ref|XP_002530016.1| conserved hypothetical protein [Ricinus comm...   603   e-170

>ref|XP_002278752.2| PREDICTED: uncharacterized membrane protein YLR241W-like [Vitis
            vinifera]
          Length = 717

 Score =  643 bits (1659), Expect = 0.0
 Identities = 322/474 (67%), Positives = 379/474 (79%), Gaps = 1/474 (0%)
 Frame = -1

Query: 1419 MIVSALLTSVGINLFLCILFFTLYSILRKQPGNIDVYAPRLIANDKSQTTSGFNLERLLP 1240
            MI+SALLTSVGINL LC LFFTLYSILRKQPGNI VYAPRL+A  KSQ T+ FNL+RLLP
Sbjct: 1    MILSALLTSVGINLGLCFLFFTLYSILRKQPGNIHVYAPRLVAEGKSQRTNHFNLDRLLP 60

Query: 1239 STGWVRRAWDLSEDELLSISGLDGVVFMRIFTFSLKMFSFIGLVGVFILLPINYVGGQLR 1060
            S GWV RAW  SE++LLS SGLD VVFMRIF FSL++F+F G++GVFILLPINY+G QL 
Sbjct: 61   SAGWVTRAWQPSEEDLLSTSGLDAVVFMRIFIFSLRVFTFAGIIGVFILLPINYLGNQLS 120

Query: 1059 IDIYDLPNKSLDLFSISNVEDGSKRLWVHFGAVYITTAFVCYLLYQENRYITSKRIAWFY 880
            ID  DLPNKSLD FSISNV++GS RLW+HF A Y+ T  VCYLLY E  YI+SKRIAWFY
Sbjct: 121  IDFSDLPNKSLDSFSISNVDNGSNRLWIHFSAAYVFTGVVCYLLYFEYSYISSKRIAWFY 180

Query: 879  SSKPQPHQFTILVRGIPTSAEGTFSDEVYRFFMEYHSSSYLSHSMVCRTSKLQGLITDAK 700
             SKPQPHQFTILV GIP S+     + V  FF +YH S+YLSH++V RT+KLQ +I DA+
Sbjct: 181  HSKPQPHQFTILVSGIPVSSGSRVGESVESFFTKYHPSTYLSHTVVRRTNKLQKVIDDAE 240

Query: 699  KLYKRLTHLKSDVHAQQKFRRSGFLGLFGPKVSLVDHYGKKLDDLEENVRVQQSDVS-LT 523
            KLY+ L HLKS  H QQ+FRR GFLGL G +V L+D Y KKL+DLE+N+R++QS ++   
Sbjct: 241  KLYRTLGHLKSKRHTQQRFRRDGFLGLSGRRVDLLDQYEKKLEDLEDNLRMEQSSLAGEV 300

Query: 522  REEVPAAFVSFKSRYGASIALNIQQSIDPTEWIIEQAPEPHDVYWPFFFETFLQRWISKL 343
            R EV AAFVSFKSR+GA+IAL+IQQ IDPTEW+ E+APEP DVYWPFF  +FL+RWI KL
Sbjct: 301  RAEVRAAFVSFKSRFGAAIALHIQQGIDPTEWVTERAPEPQDVYWPFFSASFLKRWICKL 360

Query: 342  AVIVASIIXXXXXXXXXXXXXXLANLNQLETWLPFLKGVLTITFVSQVLTGYLPSLILQL 163
              +VA I+              L +L+QLE W PFL+GVLTITFVSQV+TGYLPSLILQL
Sbjct: 361  VFVVAYILLTVSFLIPVVIVQGLTHLDQLEVWFPFLRGVLTITFVSQVITGYLPSLILQL 420

Query: 162  ALSIVPPIMKIFSSMQGHFSHSEIERSACIKVLWFTIWNVFFANVLSGSVFSQV 1
             LS+VPPIM IFSSMQG+ S S+I++SAC K+LWFTIWN+FFANVLSGSV  QV
Sbjct: 421  FLSLVPPIMIIFSSMQGYISFSKIQKSACTKMLWFTIWNIFFANVLSGSVLYQV 474


>ref|XP_002305383.1| predicted protein [Populus trichocarpa] gi|222848347|gb|EEE85894.1|
            predicted protein [Populus trichocarpa]
          Length = 716

 Score =  613 bits (1581), Expect = e-173
 Identities = 311/470 (66%), Positives = 370/470 (78%), Gaps = 2/470 (0%)
 Frame = -1

Query: 1419 MIVSALLTSVGINLFLCILFFTLYSILRKQPGNIDVYAPRLIANDKSQT--TSGFNLERL 1246
            MI+SALLTSVGINL LC+LFFTLYSILRKQPGN  VYAPRL+  +KSQ   +  F LERL
Sbjct: 1    MILSALLTSVGINLGLCLLFFTLYSILRKQPGNFYVYAPRLVDKEKSQPQESDDFYLERL 60

Query: 1245 LPSTGWVRRAWDLSEDELLSISGLDGVVFMRIFTFSLKMFSFIGLVGVFILLPINYVGGQ 1066
            LPS GWVR AW LSEDE+LSISGLDG+V  RIFTFSLK+F+  G++G+ ILLPINY G Q
Sbjct: 61   LPSAGWVRNAWQLSEDEILSISGLDGLVLTRIFTFSLKVFTVAGVIGISILLPINYFGNQ 120

Query: 1065 LRIDIYDLPNKSLDLFSISNVEDGSKRLWVHFGAVYITTAFVCYLLYQENRYITSKRIAW 886
            L  D   LPNKSLD FSISNV DGS RLWVHF A YI T  VCYLLY E+ Y+++KRIA+
Sbjct: 121  LSDDFGHLPNKSLDSFSISNVNDGSNRLWVHFSAAYIFTGVVCYLLYYEHNYMSAKRIAY 180

Query: 885  FYSSKPQPHQFTILVRGIPTSAEGTFSDEVYRFFMEYHSSSYLSHSMVCRTSKLQGLITD 706
            FYSSKPQPHQFTILVR IP+S+   FS+ V  FF EYH S+YLSHSMV RTSK+Q LI D
Sbjct: 181  FYSSKPQPHQFTILVRSIPSSSGKNFSETVESFFTEYHPSTYLSHSMVHRTSKIQDLIND 240

Query: 705  AKKLYKRLTHLKSDVHAQQKFRRSGFLGLFGPKVSLVDHYGKKLDDLEENVRVQQSDVSL 526
            A KLY++L  +KS+ H+QQ FRR GFLGL G KV+L+D Y KKL+DLE+N+R +Q+   L
Sbjct: 241  ADKLYRKLDCMKSNNHSQQNFRRDGFLGLTGRKVNLLDLYEKKLEDLEDNLRKEQN--LL 298

Query: 525  TREEVPAAFVSFKSRYGASIALNIQQSIDPTEWIIEQAPEPHDVYWPFFFETFLQRWISK 346
              EEVPAAFVSFKSR+GA++AL+IQQ ++PTEW+ E+APEP DV+W FF  +F++RWI K
Sbjct: 299  AGEEVPAAFVSFKSRFGAAVALHIQQGVNPTEWVTERAPEPQDVHWAFFSASFIKRWIFK 358

Query: 345  LAVIVASIIXXXXXXXXXXXXXXLANLNQLETWLPFLKGVLTITFVSQVLTGYLPSLILQ 166
            L V+VAS                LANL+QLE W PFLK +L++T VSQV+TGYLPSLILQ
Sbjct: 359  LVVLVASFALIVLFLIPVVIVQGLANLDQLEKWFPFLKDILSLTVVSQVITGYLPSLILQ 418

Query: 165  LALSIVPPIMKIFSSMQGHFSHSEIERSACIKVLWFTIWNVFFANVLSGS 16
            L LS VPPIM  FS++QG+ S S+IERS+C K+LWF IWN+FFANVLSGS
Sbjct: 419  LFLSFVPPIMLTFSAIQGYISRSQIERSSCSKMLWFIIWNIFFANVLSGS 468


>ref|XP_002269926.1| PREDICTED: uncharacterized membrane protein C2G11.09 [Vitis vinifera]
          Length = 715

 Score =  608 bits (1567), Expect = e-171
 Identities = 309/469 (65%), Positives = 372/469 (79%), Gaps = 1/469 (0%)
 Frame = -1

Query: 1419 MIVSALLTSVGINLFLCILFFTLYSILRKQPGNIDVYAPRLIANDKSQTTSGFNLERLLP 1240
            M+VS+LLTS+GINL LCILFF LYSIL+KQPGN +VYAPRL+A  KS+  S FNLERLLP
Sbjct: 1    MLVSSLLTSLGINLGLCILFFMLYSILKKQPGNFEVYAPRLLAEGKSKKISHFNLERLLP 60

Query: 1239 STGWVRRAWDLSEDELLSISGLDGVVFMRIFTFSLKMFSFIGLVGVFILLPINYVGGQLR 1060
            S GWVRRAW  SE+ELLS SGLD VVFMRIF FS ++F   G++G+F+LLP+N VG QL+
Sbjct: 61   SPGWVRRAWQPSEEELLSSSGLDTVVFMRIFIFSFRVFLVAGILGIFVLLPVNCVGDQLK 120

Query: 1059 -IDIYDLPNKSLDLFSISNVEDGSKRLWVHFGAVYITTAFVCYLLYQENRYITSKRIAWF 883
             ID  D  N SLDLF+ISNV++GSK LW+HF +VYI T +VCYLLY E +YI+ KRIA+F
Sbjct: 121  SIDFSDFSNNSLDLFTISNVKNGSKWLWLHFCSVYIVTVWVCYLLYYEYKYISLKRIAYF 180

Query: 882  YSSKPQPHQFTILVRGIPTSAEGTFSDEVYRFFMEYHSSSYLSHSMVCRTSKLQGLITDA 703
            YSSKPQPHQFTILV  IP SA  +  D V  FF EY+ S+YLS+ +V RT++L+GLI DA
Sbjct: 181  YSSKPQPHQFTILVHSIPVSAGSSVGDTVENFFTEYYPSTYLSNVVVRRTNRLRGLINDA 240

Query: 702  KKLYKRLTHLKSDVHAQQKFRRSGFLGLFGPKVSLVDHYGKKLDDLEENVRVQQSDVSLT 523
            KKLYK+L  L+S+ + Q K +R    GLFG KV LVD Y KKL+ LEENVR++QS+VSL 
Sbjct: 241  KKLYKKLDRLQSEPN-QPKLKRGCCFGLFGEKVDLVDQYEKKLEGLEENVRLEQSEVSLA 299

Query: 522  REEVPAAFVSFKSRYGASIALNIQQSIDPTEWIIEQAPEPHDVYWPFFFETFLQRWISKL 343
             E+V AAFVSFKSRY A+IA ++QQSI+PT+W+ EQAPEPHDVYWPFF  +F++RWISKL
Sbjct: 300  GEDVRAAFVSFKSRYDAAIAFHLQQSINPTQWVAEQAPEPHDVYWPFFSSSFMRRWISKL 359

Query: 342  AVIVASIIXXXXXXXXXXXXXXLANLNQLETWLPFLKGVLTITFVSQVLTGYLPSLILQL 163
             VIVA I+              L NLNQLETWLPFLK +LT+T VS+V+TGYLPSLILQL
Sbjct: 360  LVIVAFILLTILFLIPVVIVQGLTNLNQLETWLPFLKSILTLTIVSEVITGYLPSLILQL 419

Query: 162  ALSIVPPIMKIFSSMQGHFSHSEIERSACIKVLWFTIWNVFFANVLSGS 16
             L  VPPIM+ FSS+QG+ + S+IE+SAC KVLWFTIWNVFFANVLSGS
Sbjct: 420  FLKAVPPIMEFFSSIQGYMALSDIEKSACNKVLWFTIWNVFFANVLSGS 468


>ref|XP_002522488.1| conserved hypothetical protein [Ricinus communis]
            gi|223538373|gb|EEF39980.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 710

 Score =  605 bits (1559), Expect = e-170
 Identities = 300/474 (63%), Positives = 374/474 (78%), Gaps = 1/474 (0%)
 Frame = -1

Query: 1419 MIVSALLTSVGINLFLCILFFTLYSILRKQPGNIDVYAPRLIANDKSQTTSGFNLERLLP 1240
            M+VSALLTS+GIN  LC+LFF  YSILRKQP N +VYAPRL+A   S+  S FNLERL+P
Sbjct: 1    MLVSALLTSLGINSGLCVLFFVFYSILRKQPSNYEVYAPRLLAEGNSKRRSRFNLERLIP 60

Query: 1239 STGWVRRAWDLSEDELLSISGLDGVVFMRIFTFSLKMFSFIGLVGVFILLPINYVGGQL- 1063
            S GW+ +AW LSE+++L  SGLD VVFMR+ TFSLK+FSF G++G+F+LLP+N +G QL 
Sbjct: 61   SPGWISKAWKLSEEDILLSSGLDAVVFMRLITFSLKVFSFAGIIGIFVLLPVNCLGTQLQ 120

Query: 1062 RIDIYDLPNKSLDLFSISNVEDGSKRLWVHFGAVYITTAFVCYLLYQENRYITSKRIAWF 883
            +ID  DL + SLD+F+ISNV  GSK LW+HF AVY+ + F+CYLLY E +YI+SKRIA+F
Sbjct: 121  KIDFADLSSNSLDVFTISNVNYGSKWLWMHFCAVYMISIFICYLLYNEYKYISSKRIAYF 180

Query: 882  YSSKPQPHQFTILVRGIPTSAEGTFSDEVYRFFMEYHSSSYLSHSMVCRTSKLQGLITDA 703
            YSSKPQPHQFTILVRGIP S   + S+ V RFF EYH ++YLSH +V R+S L+ L+T+A
Sbjct: 181  YSSKPQPHQFTILVRGIPVSVGSSISETVERFFTEYHPTTYLSHMVVRRSSNLRSLVTEA 240

Query: 702  KKLYKRLTHLKSDVHAQQKFRRSGFLGLFGPKVSLVDHYGKKLDDLEENVRVQQSDVSLT 523
            KKLY RL HL+S+  + QK+RR   +GLFG  V LVDHY KKL+D+E+NV+++QSD+S  
Sbjct: 241  KKLYTRLLHLQSEP-SHQKYRR---IGLFGENVDLVDHYEKKLEDVEQNVKLEQSDLSFG 296

Query: 522  REEVPAAFVSFKSRYGASIALNIQQSIDPTEWIIEQAPEPHDVYWPFFFETFLQRWISKL 343
             EE  AAFVSFKSRYGA++A ++QQS++PT+W+ EQAPEP DVYWPFF  +F++RWISKL
Sbjct: 297  -EETRAAFVSFKSRYGAAVAFHLQQSVNPTQWVTEQAPEPDDVYWPFFSSSFMRRWISKL 355

Query: 342  AVIVASIIXXXXXXXXXXXXXXLANLNQLETWLPFLKGVLTITFVSQVLTGYLPSLILQL 163
             V+VA I+              L NL+QLE W PFLK +LTITFVSQV+TGYLPSLILQL
Sbjct: 356  VVVVACILLTILFLIPVVVVQGLTNLSQLEIWFPFLKSILTITFVSQVITGYLPSLILQL 415

Query: 162  ALSIVPPIMKIFSSMQGHFSHSEIERSACIKVLWFTIWNVFFANVLSGSVFSQV 1
             L IVPPIM+  SS+QG+ SHS+IE+SAC KVLWFTIWN+FFA V SGSV  QV
Sbjct: 416  FLKIVPPIMEFLSSIQGYISHSDIEKSACNKVLWFTIWNIFFATVFSGSVLYQV 469


>ref|XP_002530016.1| conserved hypothetical protein [Ricinus communis]
            gi|223530495|gb|EEF32378.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 717

 Score =  603 bits (1555), Expect = e-170
 Identities = 305/477 (63%), Positives = 374/477 (78%), Gaps = 4/477 (0%)
 Frame = -1

Query: 1419 MIVSALLTSVGINLFLCILFFTLYSILRKQPGNIDVYAPRLIANDKS-QTTSG--FNLER 1249
            MI+SALLTSVGINL LC LFFTLYSIL+KQP N  VYAPRL+ + KS Q   G  F+LER
Sbjct: 1    MILSALLTSVGINLGLCFLFFTLYSILKKQPSNRYVYAPRLVRSQKSNQQLQGNEFDLER 60

Query: 1248 LLPSTGWVRRAWDLSEDELLSISGLDGVVFMRIFTFSLKMFSFIGLVGVFILLPINYVGG 1069
            LLPS GWV RAW L++D L+SISGLD +VF RIF F L++F+F G+VG+F+LLP+NY+G 
Sbjct: 61   LLPSAGWVTRAWQLTDDHLISISGLDALVFARIFYFGLRVFAFGGIVGIFVLLPVNYLGN 120

Query: 1068 QLRID-IYDLPNKSLDLFSISNVEDGSKRLWVHFGAVYITTAFVCYLLYQENRYITSKRI 892
            QL  D  YDLPNKSLD FSISNV+DGS  LW+HF A Y+ T  VCYLLY E  YI SKRI
Sbjct: 121  QLNRDNFYDLPNKSLDSFSISNVDDGSNWLWMHFSAAYVFTGVVCYLLYYEYNYIFSKRI 180

Query: 891  AWFYSSKPQPHQFTILVRGIPTSAEGTFSDEVYRFFMEYHSSSYLSHSMVCRTSKLQGLI 712
            A FYSSKPQPHQFTILVRGIP+ +  +FS+ V  FF + H S+YLSHSM+ +TSK++GLI
Sbjct: 181  ACFYSSKPQPHQFTILVRGIPSLSARSFSEVVESFFTQNHPSTYLSHSMIHQTSKIRGLI 240

Query: 711  TDAKKLYKRLTHLKSDVHAQQKFRRSGFLGLFGPKVSLVDHYGKKLDDLEENVRVQQSDV 532
             DA+KLY+RL H+K++ H +Q F+R GFLGLFG KV++VDHY KKL++LE+NVR++Q   
Sbjct: 241  DDAEKLYRRLAHVKTENHLRQHFKRDGFLGLFGKKVNIVDHYEKKLENLEDNVRMKQR-- 298

Query: 531  SLTREEVPAAFVSFKSRYGASIALNIQQSIDPTEWIIEQAPEPHDVYWPFFFETFLQRWI 352
            SL  E+VPAAFVSFKSR+GA++AL+IQQ ++PTEW+ EQAPEP DV+W FF  +FL+RWI
Sbjct: 299  SLAGEKVPAAFVSFKSRFGAAVALHIQQGVNPTEWVTEQAPEPQDVHWSFFSASFLRRWI 358

Query: 351  SKLAVIVASIIXXXXXXXXXXXXXXLANLNQLETWLPFLKGVLTITFVSQVLTGYLPSLI 172
             KL  + A +I              LANL QLETW PFLKG+L++T VSQ++TGYLPSLI
Sbjct: 359  YKLVAVFAFLILTILFLIPVLLVQGLANLYQLETWFPFLKGILSLTVVSQLITGYLPSLI 418

Query: 171  LQLALSIVPPIMKIFSSMQGHFSHSEIERSACIKVLWFTIWNVFFANVLSGSVFSQV 1
            LQL L  VPP+M +FSSMQG+ S S+IE+SAC KVL FT+WN+F ANVLSGS F  V
Sbjct: 419  LQLFLFFVPPLMILFSSMQGYISLSQIEKSACTKVLCFTLWNIFLANVLSGSAFYMV 475


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