BLASTX nr result

ID: Coptis23_contig00003236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003236
         (872 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282328.1| PREDICTED: uncharacterized protein LOC100266...   217   3e-54
emb|CAN69653.1| hypothetical protein VITISV_010540 [Vitis vinifera]   216   4e-54
ref|NP_001235544.1| uncharacterized protein LOC100527400 [Glycin...   216   5e-54
ref|XP_003555806.1| PREDICTED: uncharacterized protein LOC100811...   213   4e-53
ref|XP_003591215.1| hypothetical protein MTR_1g084000 [Medicago ...   212   1e-52

>ref|XP_002282328.1| PREDICTED: uncharacterized protein LOC100266617 [Vitis vinifera]
           gi|296089770|emb|CBI39589.3| unnamed protein product
           [Vitis vinifera]
          Length = 195

 Score =  217 bits (552), Expect = 3e-54
 Identities = 120/176 (68%), Positives = 135/176 (76%), Gaps = 16/176 (9%)
 Frame = +3

Query: 30  SSVITPEDVLESLMNDGTIDAIRLKIINQLKANEELKKNTITMVEQSKVLNTPGAEKQTK 209
           S VITPEDVLESLMNDGTIDAIRLKIINQLKANEELK +TI M EQSKVLNTPGAEKQTK
Sbjct: 3   SPVITPEDVLESLMNDGTIDAIRLKIINQLKANEELKNSTIKMAEQSKVLNTPGAEKQTK 62

Query: 210 RELFDALRQELETPVLEKASKSFWELTVEDDGLGKEISETVERVFYQLSGLEPPSFPVAL 389
           RELFDALRQELETP LEKASKS WEL ++++GLGKEISETVERVF +LSG E P FP   
Sbjct: 63  RELFDALRQELETPALEKASKSVWELILDNNGLGKEISETVERVFCRLSGREAPLFPEPN 122

Query: 390 GDAQPGKERQQG--------------NSETSSKKRSYTTL--QGGTSEVSDGSTCP 509
            +AQPGKE ++G              NS ++SKKRS+  +  +GG  EV+  S  P
Sbjct: 123 IEAQPGKENEKGKAKENENENENRKENSGSTSKKRSFAEMNSEGGADEVASKSRDP 178


>emb|CAN69653.1| hypothetical protein VITISV_010540 [Vitis vinifera]
          Length = 195

 Score =  216 bits (551), Expect = 4e-54
 Identities = 119/177 (67%), Positives = 136/177 (76%), Gaps = 16/177 (9%)
 Frame = +3

Query: 27  SSSVITPEDVLESLMNDGTIDAIRLKIINQLKANEELKKNTITMVEQSKVLNTPGAEKQT 206
           +S +ITPEDVLESLMNDGTIDAIRLKIINQLKANEELK +TI M EQSKVLNTPGAEKQT
Sbjct: 2   ASGLITPEDVLESLMNDGTIDAIRLKIINQLKANEELKNSTIKMAEQSKVLNTPGAEKQT 61

Query: 207 KRELFDALRQELETPVLEKASKSFWELTVEDDGLGKEISETVERVFYQLSGLEPPSFPVA 386
           KRELFDALRQELETP LEKASKS WEL ++++GLGKEISETVERVF +LSG E P FP  
Sbjct: 62  KRELFDALRQELETPALEKASKSVWELILDNNGLGKEISETVERVFCRLSGREAPLFPEP 121

Query: 387 LGDAQPGKERQQG--------------NSETSSKKRSYTTL--QGGTSEVSDGSTCP 509
             +AQPGKE ++G              NS ++SKKRS+  +  +GG  EV+  S  P
Sbjct: 122 NIEAQPGKENEKGKAKENENENENRKENSGSTSKKRSFAEMNSEGGADEVASKSRDP 178


>ref|NP_001235544.1| uncharacterized protein LOC100527400 [Glycine max]
           gi|255632264|gb|ACU16490.1| unknown [Glycine max]
          Length = 193

 Score =  216 bits (550), Expect = 5e-54
 Identities = 118/177 (66%), Positives = 134/177 (75%), Gaps = 13/177 (7%)
 Frame = +3

Query: 21  MGSSSVITPEDVLESLMNDGTIDAIRLKIINQLKANEELKKNTITMVEQSKVLNTPGAEK 200
           M SSS+ITPEDVLESLMNDGTIDA+RLKIINQLKANEELK  TI M EQSKVLNTPGAEK
Sbjct: 1   MASSSIITPEDVLESLMNDGTIDALRLKIINQLKANEELKSTTIKMAEQSKVLNTPGAEK 60

Query: 201 QTKRELFDALRQELETPVLEKASKSFWELTVEDDGLGKEISETVERVFYQLSGLEPPSFP 380
           QTKRELFDALRQELE  VLEKASKS W+L ++++GLGKEISETVERVF +LSG EPP FP
Sbjct: 61  QTKRELFDALRQELEASVLEKASKSVWDLILDNNGLGKEISETVERVFCRLSGQEPPLFP 120

Query: 381 VALGDAQPG------------KERQQGNSETSSKKRSYTTLQ-GGTSEVSDGSTCPA 512
           +  G+ QP             KE +  NS T SKKRS++ +   G  E +  S+ PA
Sbjct: 121 LPNGEPQPDKETDNRKEKGKQKENENTNSNTPSKKRSFSEINLDGADETATRSSDPA 177


>ref|XP_003555806.1| PREDICTED: uncharacterized protein LOC100811466 [Glycine max]
          Length = 195

 Score =  213 bits (543), Expect = 4e-53
 Identities = 117/180 (65%), Positives = 133/180 (73%), Gaps = 15/180 (8%)
 Frame = +3

Query: 21  MGSSSVITPEDVLESLMNDGTIDAIRLKIINQLKANEELKKNTITMVEQSKVLNTPGAEK 200
           M SSS+ITPEDVLESLMNDGTIDA+RLKIINQLKANEELK  TI M EQSKVLNTPGAEK
Sbjct: 1   MASSSIITPEDVLESLMNDGTIDALRLKIINQLKANEELKSTTIKMAEQSKVLNTPGAEK 60

Query: 201 QTKRELFDALRQELETPVLEKASKSFWELTVEDDGLGKEISETVERVFYQLSGLEPPSFP 380
           QTKRELFDALRQELE  VLEKASKS W+L ++++GLGKEISE VERVF +LSG EPP FP
Sbjct: 61  QTKRELFDALRQELEASVLEKASKSVWDLILDNNGLGKEISEMVERVFCRLSGQEPPLFP 120

Query: 381 VALGDAQPG--------------KERQQGNSETSSKKRSYTTLQ-GGTSEVSDGSTCPAI 515
           +  G  QP               KE +  NS T SKKRS++ +   G  E +  S+ PA+
Sbjct: 121 LPNGQPQPDKETDNRKEKGKGKQKENENRNSNTPSKKRSFSEINLDGADETATWSSDPAV 180


>ref|XP_003591215.1| hypothetical protein MTR_1g084000 [Medicago truncatula]
           gi|355480263|gb|AES61466.1| hypothetical protein
           MTR_1g084000 [Medicago truncatula]
          Length = 202

 Score =  212 bits (539), Expect = 1e-52
 Identities = 119/179 (66%), Positives = 136/179 (75%), Gaps = 15/179 (8%)
 Frame = +3

Query: 21  MGSSSVITPEDVLESLMNDGTIDAIRLKIINQLKANEELKKNTITMVEQSKVLNTPGAEK 200
           M SSSVITPEDVLESLMNDGTIDA+RLKIINQLKANEELK  TI M EQSKVLNTPGAEK
Sbjct: 1   MASSSVITPEDVLESLMNDGTIDALRLKIINQLKANEELKSTTIKMAEQSKVLNTPGAEK 60

Query: 201 QTKRELFDALRQELETPVLEKASKSFWELTVEDDGLGKEISETVERVFYQLSGLEPPSFP 380
           QTKRELFDALRQELE  VLEKASKS W+L ++++GLGKEISETVERVF +LSG EPP FP
Sbjct: 61  QTKRELFDALRQELEASVLEKASKSVWDLILDNNGLGKEISETVERVFCRLSGQEPPLFP 120

Query: 381 VALGDAQPGKE----RQQGNSE----------TSSKKRSYT-TLQGGTSEVSDGSTCPA 512
           +  G+ QP KE    +++G  +          T SKKRS++ T   G  E +  S+ PA
Sbjct: 121 LLNGEPQPDKEADSRKEKGKGKLKENENTSLITPSKKRSFSETNLDGADETATRSSDPA 179


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