BLASTX nr result

ID: Coptis23_contig00003235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003235
         (1690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]   189   2e-45
emb|CBI20209.3| unnamed protein product [Vitis vinifera]              187   1e-44
ref|XP_002283052.1| PREDICTED: uncharacterized protein LOC100264...   187   1e-44
ref|XP_002891738.1| F12M16.15 [Arabidopsis lyrata subsp. lyrata]...   160   1e-36
gb|AAF69533.1|AC008007_8 F12M16.15 [Arabidopsis thaliana]             159   3e-36

>emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]
          Length = 2822

 Score =  189 bits (480), Expect = 2e-45
 Identities = 113/250 (45%), Positives = 149/250 (59%), Gaps = 5/250 (2%)
 Frame = +2

Query: 17   VSVLNIRSHSPTFANFFSRVHSARTLQLSDIVGNS--SQRTLKAQVSASLSWNHTIDEER 190
            VSV+     S  F++ FSR+HS   LQ+S   G +  S    ++++ A  S  HT++   
Sbjct: 2466 VSVMKNVPPSLGFSSSFSRLHSLGALQMSINAGETLDSDECGESKLGADSSKKHTLNGVV 2525

Query: 191  QFDFTSGCIEDMDVKADKEIERRKKIGVANKGKAPWNKGRKHSAETRELIKQRTIEALKD 370
            Q D  S   E       KE +RR+KIG+ANKG+ PWNKGRKHSAETRE I+QRTI+AL+D
Sbjct: 2526 QLDSYSNSGEIYINDHCKESQRRRKIGLANKGRVPWNKGRKHSAETREKIRQRTIQALRD 2585

Query: 371  PKVRKKMSEGHRPHSDVIKAKIGLGQRRVWRKRLKLKSIKEKFYHMWSESIAEAAKKGLF 550
            PKVR+KMSE  R HS+  KAKI    RRVW KRLK K  +EKFY  W+ESIA+AAKKG  
Sbjct: 2586 PKVRQKMSECPRTHSEQSKAKIRSSLRRVWGKRLKWKRSREKFYLSWAESIAKAAKKGGS 2645

Query: 551  DQQELDWDSYXXXXXXXXXXXXXXXXXXXKAKEITKLLXXXXXXXXXXXXXL---QKKEK 721
            DQ+ELDWDSY                   KAKE+ K+              +   +++E+
Sbjct: 2646 DQEELDWDSYDKIKEEIALQQLQWAENKKKAKELAKMRAERAARARAEKMAMLAEKRRER 2705

Query: 722  EERAKSEGEV 751
            E +A++ GE+
Sbjct: 2706 ERQAEARGEI 2715


>emb|CBI20209.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score =  187 bits (474), Expect = 1e-44
 Identities = 112/250 (44%), Positives = 148/250 (59%), Gaps = 5/250 (2%)
 Frame = +2

Query: 17  VSVLNIRSHSPTFANFFSRVHSARTLQLSDIVGNS--SQRTLKAQVSASLSWNHTIDEER 190
           VSV+     S  F++ FSR+HS   L +S   G +  S    ++++ A  S  HT++   
Sbjct: 43  VSVMKNVPPSLGFSSSFSRLHSLGALPMSINAGETLDSDECGESKLGADSSKKHTLNGVV 102

Query: 191 QFDFTSGCIEDMDVKADKEIERRKKIGVANKGKAPWNKGRKHSAETRELIKQRTIEALKD 370
           Q D  S   E       KE +RR+KIG+ANKG+ PWNKGRKHSAETRE I+QRTI+AL+D
Sbjct: 103 QLDSYSNSGEIYINDHCKESQRRRKIGLANKGRVPWNKGRKHSAETREKIRQRTIQALRD 162

Query: 371 PKVRKKMSEGHRPHSDVIKAKIGLGQRRVWRKRLKLKSIKEKFYHMWSESIAEAAKKGLF 550
           PKVR+KMSE  R HS+  KAKI    RRVW KRLK K  +EKFY  W+ESIA+AAKKG  
Sbjct: 163 PKVRQKMSECPRTHSEQSKAKIRSSLRRVWGKRLKWKRSREKFYLSWAESIAKAAKKGGS 222

Query: 551 DQQELDWDSYXXXXXXXXXXXXXXXXXXXKAKEITKLLXXXXXXXXXXXXXL---QKKEK 721
           DQ+ELDWDSY                   KAKE+ K+              +   +++E+
Sbjct: 223 DQEELDWDSYDKIKEEIALQQLQWAENKKKAKELAKMRAERAARARAEKMAMLAEKRRER 282

Query: 722 EERAKSEGEV 751
           E +A++ GE+
Sbjct: 283 ERQAEARGEI 292


>ref|XP_002283052.1| PREDICTED: uncharacterized protein LOC100264054 [Vitis vinifera]
          Length = 470

 Score =  187 bits (474), Expect = 1e-44
 Identities = 112/250 (44%), Positives = 148/250 (59%), Gaps = 5/250 (2%)
 Frame = +2

Query: 17  VSVLNIRSHSPTFANFFSRVHSARTLQLSDIVGNS--SQRTLKAQVSASLSWNHTIDEER 190
           VSV+     S  F++ FSR+HS   L +S   G +  S    ++++ A  S  HT++   
Sbjct: 114 VSVMKNVPPSLGFSSSFSRLHSLGALPMSINAGETLDSDECGESKLGADSSKKHTLNGVV 173

Query: 191 QFDFTSGCIEDMDVKADKEIERRKKIGVANKGKAPWNKGRKHSAETRELIKQRTIEALKD 370
           Q D  S   E       KE +RR+KIG+ANKG+ PWNKGRKHSAETRE I+QRTI+AL+D
Sbjct: 174 QLDSYSNSGEIYINDHCKESQRRRKIGLANKGRVPWNKGRKHSAETREKIRQRTIQALRD 233

Query: 371 PKVRKKMSEGHRPHSDVIKAKIGLGQRRVWRKRLKLKSIKEKFYHMWSESIAEAAKKGLF 550
           PKVR+KMSE  R HS+  KAKI    RRVW KRLK K  +EKFY  W+ESIA+AAKKG  
Sbjct: 234 PKVRQKMSECPRTHSEQSKAKIRSSLRRVWGKRLKWKRSREKFYLSWAESIAKAAKKGGS 293

Query: 551 DQQELDWDSYXXXXXXXXXXXXXXXXXXXKAKEITKLLXXXXXXXXXXXXXL---QKKEK 721
           DQ+ELDWDSY                   KAKE+ K+              +   +++E+
Sbjct: 294 DQEELDWDSYDKIKEEIALQQLQWAENKKKAKELAKMRAERAARARAEKMAMLAEKRRER 353

Query: 722 EERAKSEGEV 751
           E +A++ GE+
Sbjct: 354 ERQAEARGEI 363


>ref|XP_002891738.1| F12M16.15 [Arabidopsis lyrata subsp. lyrata]
           gi|297337580|gb|EFH67997.1| F12M16.15 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 357

 Score =  160 bits (405), Expect = 1e-36
 Identities = 93/210 (44%), Positives = 124/210 (59%), Gaps = 3/210 (1%)
 Frame = +2

Query: 131 TLKAQVSASLSWNHTIDEERQFDFTSGCIEDMDVKADKEIERRKKIGVANKGKAPWNKGR 310
           T   +V+ SL     +D+E + D       D D K  KE ERR+KIG+ANKGK PWNKGR
Sbjct: 57  THNKEVNPSLLEVKAMDKETEAD------SDSDRKI-KEEERRRKIGLANKGKVPWNKGR 109

Query: 311 KHSAETRELIKQRTIEALKDPKVRKKMSEGHRPHSDVIKAKIGLGQRRVWRKRLKLKSIK 490
           KH+ +TR  IKQRTIEAL++PKVRKKMS+  +PHSD  K KI    ++VW +R + K +K
Sbjct: 110 KHNEDTRRRIKQRTIEALRNPKVRKKMSDHQQPHSDETKEKIRASVKQVWAERSRSKRLK 169

Query: 491 EKFYHMWSESIAEAAKKGLFDQQELDWDSYXXXXXXXXXXXXXXXXXXXKAKEITKLLXX 670
           EKF   WSE+IAEAA+KG   + EL+WDSY                   +AKE TK++  
Sbjct: 170 EKFTSSWSENIAEAARKGGSGEVELEWDSYERIKQDFSSEQLQLAEEKARAKEQTKMIAK 229

Query: 671 XXXXXXXXXXXL---QKKEKEERAKSEGEV 751
                          +KKE+EE+ + EG++
Sbjct: 230 KAAQARTEKMRKVAERKKEREEKDRREGKI 259


>gb|AAF69533.1|AC008007_8 F12M16.15 [Arabidopsis thaliana]
          Length = 363

 Score =  159 bits (401), Expect = 3e-36
 Identities = 96/235 (40%), Positives = 135/235 (57%), Gaps = 4/235 (1%)
 Frame = +2

Query: 59  NFFSRVHSARTLQLSDIVGNSSQRTL-KAQVSASLSWNHTIDEERQFDFTSGCIEDMDVK 235
           N  + + S R L+L  +    +   + + +V++SL     ++++ + D       D D K
Sbjct: 38  NSLASLRSIRHLELKSVGSLYNVFEIHRKEVNSSLLEVKAMNKDTEAD------SDSDRK 91

Query: 236 ADKEIERRKKIGVANKGKAPWNKGRKHSAETRELIKQRTIEALKDPKVRKKMSEGHRPHS 415
             KE ERR+KIG+ANKGK PWNKGRKHS +TR  IKQRTIEAL +PKVRKKMS+  +PHS
Sbjct: 92  I-KEEERRRKIGLANKGKVPWNKGRKHSEDTRRRIKQRTIEALTNPKVRKKMSDHQQPHS 150

Query: 416 DVIKAKIGLGQRRVWRKRLKLKSIKEKFYHMWSESIAEAAKKGLFDQQELDWDSYXXXXX 595
           +  K KI    ++VW +R + K +KEKF   WSE+IAEAA+KG   + ELDWDSY     
Sbjct: 151 NETKEKIRASVKQVWAERSRSKRLKEKFMSSWSENIAEAARKGGSGEAELDWDSYEKIKQ 210

Query: 596 XXXXXXXXXXXXXXKAKEITKLLXXXXXXXXXXXXXL---QKKEKEERAKSEGEV 751
                         +AKE TK++                 +KKE+EE+ + EG++
Sbjct: 211 DFSSEQLQLAEEKARAKEQTKMIAKEAAKARTEKMRRAAEKKKEREEKDRREGKI 265


Top