BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003232
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK93590.1| unknown [Populus trichocarpa]                          171   1e-40
ref|XP_002323772.1| predicted protein [Populus trichocarpa] gi|1...   170   2e-40
gb|ADR71263.1| 60S ribosomal protein L13aA [Hevea brasiliensis]       167   1e-39
ref|XP_002518107.1| 60S ribosomal protein L13a, putative [Ricinu...   167   1e-39
emb|CBI37325.3| unnamed protein product [Vitis vinifera]              167   2e-39

>gb|ABK93590.1| unknown [Populus trichocarpa]
          Length = 206

 Score =  171 bits (432), Expect = 1e-40
 Identities = 83/106 (78%), Positives = 88/106 (83%)
 Frame = -2

Query: 610 TIRGMIPHKTXXXXXXXXXXXAYEGVPPPYDKIKRMVIPDAIKVLRLQPGHKYCLLGQLS 431
           TIRGMIPHKT            +EGVPPPYDK KRMVIPDA+KVLRLQPGHKYCLLGQLS
Sbjct: 88  TIRGMIPHKTKRGEAALARLKVFEGVPPPYDKTKRMVIPDALKVLRLQPGHKYCLLGQLS 147

Query: 430 HEVGWNHYETIKELEEKRKARATLVYERKKQLTKLRVKAEKTAEEQ 293
            EVGWNHY+TIKELE KRK RA L+YERKKQL KLRVKAEKTAEE+
Sbjct: 148 SEVGWNHYDTIKELEMKRKERAQLIYERKKQLAKLRVKAEKTAEEK 193


>ref|XP_002323772.1| predicted protein [Populus trichocarpa] gi|118488226|gb|ABK95932.1|
           unknown [Populus trichocarpa]
           gi|222866774|gb|EEF03905.1| predicted protein [Populus
           trichocarpa]
          Length = 206

 Score =  170 bits (431), Expect = 2e-40
 Identities = 83/106 (78%), Positives = 88/106 (83%)
 Frame = -2

Query: 610 TIRGMIPHKTXXXXXXXXXXXAYEGVPPPYDKIKRMVIPDAIKVLRLQPGHKYCLLGQLS 431
           TIRGMIPHKT            +EGVPPPYDK KRMVIPDA+KVLRLQPGHKYCLLGQLS
Sbjct: 88  TIRGMIPHKTKRGEAALARLKVFEGVPPPYDKTKRMVIPDALKVLRLQPGHKYCLLGQLS 147

Query: 430 HEVGWNHYETIKELEEKRKARATLVYERKKQLTKLRVKAEKTAEEQ 293
            EVGWNHY+TIKELE KRK RA LVYERKKQL KLR+KAEKTAEE+
Sbjct: 148 SEVGWNHYDTIKELETKRKERAQLVYERKKQLAKLRLKAEKTAEEK 193


>gb|ADR71263.1| 60S ribosomal protein L13aA [Hevea brasiliensis]
          Length = 206

 Score =  167 bits (424), Expect = 1e-39
 Identities = 81/106 (76%), Positives = 87/106 (82%)
 Frame = -2

Query: 610 TIRGMIPHKTXXXXXXXXXXXAYEGVPPPYDKIKRMVIPDAIKVLRLQPGHKYCLLGQLS 431
           TIRGMIPHKT            YEG+PPPYDK+KRMVIPDA+KVLRLQ GHKYCLLG+LS
Sbjct: 88  TIRGMIPHKTKRGEAALARLKVYEGIPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLS 147

Query: 430 HEVGWNHYETIKELEEKRKARATLVYERKKQLTKLRVKAEKTAEEQ 293
            EVGWNHYETIKELE KRK RA + YERKKQLTKLRVKAEK AEE+
Sbjct: 148 SEVGWNHYETIKELERKRKERAQVAYERKKQLTKLRVKAEKVAEEK 193


>ref|XP_002518107.1| 60S ribosomal protein L13a, putative [Ricinus communis]
           gi|223542703|gb|EEF44240.1| 60S ribosomal protein L13a,
           putative [Ricinus communis]
          Length = 206

 Score =  167 bits (424), Expect = 1e-39
 Identities = 82/106 (77%), Positives = 87/106 (82%)
 Frame = -2

Query: 610 TIRGMIPHKTXXXXXXXXXXXAYEGVPPPYDKIKRMVIPDAIKVLRLQPGHKYCLLGQLS 431
           TIRGMIPHKT            YEGVPPPYDK+KRMVIPDA+KVLRLQ GHKYCLLG+LS
Sbjct: 88  TIRGMIPHKTKRGEAALARLKVYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLS 147

Query: 430 HEVGWNHYETIKELEEKRKARATLVYERKKQLTKLRVKAEKTAEEQ 293
            EVGWNHYETIKELE KRK RA + YERKKQLTKLRVKAEK AEE+
Sbjct: 148 SEVGWNHYETIKELERKRKERAQVAYERKKQLTKLRVKAEKIAEEK 193


>emb|CBI37325.3| unnamed protein product [Vitis vinifera]
          Length = 140

 Score =  167 bits (422), Expect = 2e-39
 Identities = 81/106 (76%), Positives = 89/106 (83%)
 Frame = -2

Query: 610 TIRGMIPHKTXXXXXXXXXXXAYEGVPPPYDKIKRMVIPDAIKVLRLQPGHKYCLLGQLS 431
           TIRGMIPHKT           AYEG+PPPYDK+KRMVIPDA+KVLRLQ GHKYCLLG+LS
Sbjct: 22  TIRGMIPHKTKRGAAALARLKAYEGIPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLS 81

Query: 430 HEVGWNHYETIKELEEKRKARATLVYERKKQLTKLRVKAEKTAEEQ 293
            EVGWNHY+TI+ELE+KRK RA L YERKKQLTKLRVKAEK AEE+
Sbjct: 82  SEVGWNHYDTIRELEKKRKERAQLAYERKKQLTKLRVKAEKVAEEK 127