BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003231
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK93590.1| unknown [Populus trichocarpa]                          189   2e-46
ref|XP_002323772.1| predicted protein [Populus trichocarpa] gi|1...   185   4e-45
ref|XP_002518107.1| 60S ribosomal protein L13a, putative [Ricinu...   184   5e-45
emb|CBI37325.3| unnamed protein product [Vitis vinifera]              182   3e-44
ref|XP_002267491.1| PREDICTED: 60S ribosomal protein L13a-4 [Vit...   182   3e-44

>gb|ABK93590.1| unknown [Populus trichocarpa]
          Length = 206

 Score =  189 bits (480), Expect = 2e-46
 Identities = 92/118 (77%), Positives = 99/118 (83%)
 Frame = -1

Query: 502 IRGMIPHKTXXXXXXXXXXXAYEGVPPPYDKIKRMVIPDAIKVLRLQPGHKYCLLGQLSH 323
           IRGMIPHKT            +EGVPPPYDK KRMVIPDA+KVLRLQPGHKYCLLGQLS 
Sbjct: 89  IRGMIPHKTKRGEAALARLKVFEGVPPPYDKTKRMVIPDALKVLRLQPGHKYCLLGQLSS 148

Query: 322 EVGWNHYETIKELEEKRKARATLVYERKKQLIKLRVKAEKTAEEQLGPQLDILAAVKY 149
           EVGWNHY+TIKELE KRK RA L+YERKKQL KLRVKAEKTAEE+LGPQLDI+A +KY
Sbjct: 149 EVGWNHYDTIKELEMKRKERAQLIYERKKQLAKLRVKAEKTAEEKLGPQLDIIAPLKY 206


>ref|XP_002323772.1| predicted protein [Populus trichocarpa] gi|118488226|gb|ABK95932.1|
           unknown [Populus trichocarpa]
           gi|222866774|gb|EEF03905.1| predicted protein [Populus
           trichocarpa]
          Length = 206

 Score =  185 bits (469), Expect = 4e-45
 Identities = 90/118 (76%), Positives = 98/118 (83%)
 Frame = -1

Query: 502 IRGMIPHKTXXXXXXXXXXXAYEGVPPPYDKIKRMVIPDAIKVLRLQPGHKYCLLGQLSH 323
           IRGMIPHKT            +EGVPPPYDK KRMVIPDA+KVLRLQPGHKYCLLGQLS 
Sbjct: 89  IRGMIPHKTKRGEAALARLKVFEGVPPPYDKTKRMVIPDALKVLRLQPGHKYCLLGQLSS 148

Query: 322 EVGWNHYETIKELEEKRKARATLVYERKKQLIKLRVKAEKTAEEQLGPQLDILAAVKY 149
           EVGWNHY+TIKELE KRK RA LVYERKKQL KLR+KAEKTAEE+LGPQ +I+A +KY
Sbjct: 149 EVGWNHYDTIKELETKRKERAQLVYERKKQLAKLRLKAEKTAEEKLGPQQEIIAPLKY 206


>ref|XP_002518107.1| 60S ribosomal protein L13a, putative [Ricinus communis]
           gi|223542703|gb|EEF44240.1| 60S ribosomal protein L13a,
           putative [Ricinus communis]
          Length = 206

 Score =  184 bits (468), Expect = 5e-45
 Identities = 89/118 (75%), Positives = 97/118 (82%)
 Frame = -1

Query: 502 IRGMIPHKTXXXXXXXXXXXAYEGVPPPYDKIKRMVIPDAIKVLRLQPGHKYCLLGQLSH 323
           IRGMIPHKT            YEGVPPPYDK+KRMVIPDA+KVLRLQ GHKYCLLG+LS 
Sbjct: 89  IRGMIPHKTKRGEAALARLKVYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSS 148

Query: 322 EVGWNHYETIKELEEKRKARATLVYERKKQLIKLRVKAEKTAEEQLGPQLDILAAVKY 149
           EVGWNHYETIKELE KRK RA + YERKKQL KLRVKAEK AEE+LGPQLD++A +KY
Sbjct: 149 EVGWNHYETIKELERKRKERAQVAYERKKQLTKLRVKAEKIAEEKLGPQLDVIAPIKY 206


>emb|CBI37325.3| unnamed protein product [Vitis vinifera]
          Length = 140

 Score =  182 bits (461), Expect = 3e-44
 Identities = 90/118 (76%), Positives = 98/118 (83%)
 Frame = -1

Query: 502 IRGMIPHKTXXXXXXXXXXXAYEGVPPPYDKIKRMVIPDAIKVLRLQPGHKYCLLGQLSH 323
           IRGMIPHKT           AYEG+PPPYDK+KRMVIPDA+KVLRLQ GHKYCLLG+LS 
Sbjct: 23  IRGMIPHKTKRGAAALARLKAYEGIPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSS 82

Query: 322 EVGWNHYETIKELEEKRKARATLVYERKKQLIKLRVKAEKTAEEQLGPQLDILAAVKY 149
           EVGWNHY+TI+ELE+KRK RA L YERKKQL KLRVKAEK AEE+L  QLDILAAVKY
Sbjct: 83  EVGWNHYDTIRELEKKRKERAQLAYERKKQLTKLRVKAEKVAEEKLSTQLDILAAVKY 140


>ref|XP_002267491.1| PREDICTED: 60S ribosomal protein L13a-4 [Vitis vinifera]
          Length = 206

 Score =  182 bits (461), Expect = 3e-44
 Identities = 90/118 (76%), Positives = 98/118 (83%)
 Frame = -1

Query: 502 IRGMIPHKTXXXXXXXXXXXAYEGVPPPYDKIKRMVIPDAIKVLRLQPGHKYCLLGQLSH 323
           IRGMIPHKT           AYEG+PPPYDK+KRMVIPDA+KVLRLQ GHKYCLLG+LS 
Sbjct: 89  IRGMIPHKTKRGAAALARLKAYEGIPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSS 148

Query: 322 EVGWNHYETIKELEEKRKARATLVYERKKQLIKLRVKAEKTAEEQLGPQLDILAAVKY 149
           EVGWNHY+TI+ELE+KRK RA L YERKKQL KLRVKAEK AEE+L  QLDILAAVKY
Sbjct: 149 EVGWNHYDTIRELEKKRKERAQLAYERKKQLTKLRVKAEKVAEEKLSTQLDILAAVKY 206