BLASTX nr result

ID: Coptis23_contig00003225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003225
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269875.2| PREDICTED: endoglucanase 9-like [Vitis vinif...   115   4e-24
emb|CAN63305.1| hypothetical protein VITISV_003341 [Vitis vinifera]   115   4e-24
gb|AAB65156.1| basic cellulase [Citrus sinensis]                      113   2e-23
gb|AAQ55294.1| endo-1,4-beta-glucanase [Malus x domestica]            112   3e-23
ref|XP_002890540.1| glycosyl hydrolase family 9 protein [Arabido...   108   6e-22

>ref|XP_002269875.2| PREDICTED: endoglucanase 9-like [Vitis vinifera]
           gi|297734804|emb|CBI17038.3| unnamed protein product
           [Vitis vinifera]
          Length = 494

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/81 (71%), Positives = 60/81 (74%)
 Frame = +2

Query: 2   DHKCWERPEDMDTVRSVYSVSVGNPGSDVAGETXXXXXXXSMVFRKVDPXXXXXXXXXXX 181
           DHKCWERPEDMDTVR+VYSVS  NPGSDVAGET       SMVFRKVDP           
Sbjct: 151 DHKCWERPEDMDTVRTVYSVSPRNPGSDVAGETAAALAAASMVFRKVDPKYSRLLLATAK 210

Query: 182 XVMQFALQYRGAYSDSLGSAV 244
            VMQFA+QYRGAYSDSLGSAV
Sbjct: 211 KVMQFAMQYRGAYSDSLGSAV 231


>emb|CAN63305.1| hypothetical protein VITISV_003341 [Vitis vinifera]
          Length = 348

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/81 (71%), Positives = 60/81 (74%)
 Frame = +2

Query: 2   DHKCWERPEDMDTVRSVYSVSVGNPGSDVAGETXXXXXXXSMVFRKVDPXXXXXXXXXXX 181
           DHKCWERPEDMDTVR+VYSVS  NPGSDVAGET       SMVFRKVDP           
Sbjct: 20  DHKCWERPEDMDTVRTVYSVSPRNPGSDVAGETAAALAAASMVFRKVDPKYSRLLLATAK 79

Query: 182 XVMQFALQYRGAYSDSLGSAV 244
            VMQFA+QYRGAYSDSLGSAV
Sbjct: 80  KVMQFAMQYRGAYSDSLGSAV 100


>gb|AAB65156.1| basic cellulase [Citrus sinensis]
          Length = 488

 Score =  113 bits (282), Expect = 2e-23
 Identities = 56/81 (69%), Positives = 59/81 (72%)
 Frame = +2

Query: 2   DHKCWERPEDMDTVRSVYSVSVGNPGSDVAGETXXXXXXXSMVFRKVDPXXXXXXXXXXX 181
           DHKCWERPEDMDTVRSVYSVS  NPGSDVAGET       S+VFRK DP           
Sbjct: 145 DHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAK 204

Query: 182 XVMQFALQYRGAYSDSLGSAV 244
            V+QFA+QYRGAYSDSLGSAV
Sbjct: 205 NVLQFAMQYRGAYSDSLGSAV 225


>gb|AAQ55294.1| endo-1,4-beta-glucanase [Malus x domestica]
          Length = 497

 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/81 (67%), Positives = 59/81 (72%)
 Frame = +2

Query: 2   DHKCWERPEDMDTVRSVYSVSVGNPGSDVAGETXXXXXXXSMVFRKVDPXXXXXXXXXXX 181
           DHKCWERPEDMDT R+VYSVS  NPGSDVAGET       S+VFR+VDP           
Sbjct: 154 DHKCWERPEDMDTTRTVYSVSPSNPGSDVAGETAAALAAASLVFRRVDPKYSKLLLNTAR 213

Query: 182 XVMQFALQYRGAYSDSLGSAV 244
            VMQFA+QYRGAYSDSLGSAV
Sbjct: 214 NVMQFAIQYRGAYSDSLGSAV 234


>ref|XP_002890540.1| glycosyl hydrolase family 9 protein [Arabidopsis lyrata subsp.
           lyrata] gi|297336382|gb|EFH66799.1| glycosyl hydrolase
           family 9 protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  108 bits (269), Expect = 6e-22
 Identities = 54/81 (66%), Positives = 57/81 (70%)
 Frame = +2

Query: 2   DHKCWERPEDMDTVRSVYSVSVGNPGSDVAGETXXXXXXXSMVFRKVDPXXXXXXXXXXX 181
           DHKCWERPEDMDT R+VYSVS  NPGSDVA ET       SMVFRKVDP           
Sbjct: 143 DHKCWERPEDMDTPRTVYSVSSSNPGSDVAAETAAALAASSMVFRKVDPKYSRLLLATAK 202

Query: 182 XVMQFALQYRGAYSDSLGSAV 244
            VMQFA+QYRGAYSDSL S+V
Sbjct: 203 KVMQFAIQYRGAYSDSLSSSV 223


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