BLASTX nr result
ID: Coptis23_contig00003221
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00003221
(3841 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270102.1| PREDICTED: uncharacterized protein LOC100266... 693 0.0
emb|CBI34075.3| unnamed protein product [Vitis vinifera] 689 0.0
ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232... 551 e-154
ref|XP_002526479.1| RNA binding protein, putative [Ricinus commu... 530 e-148
gb|AEV43360.1| RNA recognition motif protein 1 [Citrus sinensis] 521 e-145
>ref|XP_002270102.1| PREDICTED: uncharacterized protein LOC100266805 [Vitis vinifera]
Length = 719
Score = 693 bits (1789), Expect = 0.0
Identities = 349/599 (58%), Positives = 433/599 (72%), Gaps = 6/599 (1%)
Frame = +1
Query: 433 HHDVMKERRKRKEFEIFVGGLDRDANEEDMRKVFSQVGEVTEVRLMKNPMTQKNKGFGFV 612
HHD++KERRKRKEFE+FVGGLDRD E+D+ F QVG++TEVRLMKN +TQKNKGF F+
Sbjct: 112 HHDLVKERRKRKEFEVFVGGLDRDVTEDDLFHFFRQVGDITEVRLMKNALTQKNKGFAFI 171
Query: 613 RFATVEQARRAINELKHPTVNGKQCGVSPSQDSDTLFVGNICKTWTKAVFREKLVHHGVD 792
RFATVEQARRA+NELKHP +NGKQCGV+PSQDSDTLFVGNICKTWTK ++KL ++GVD
Sbjct: 172 RFATVEQARRAVNELKHPVINGKQCGVAPSQDSDTLFVGNICKTWTKVAVKDKLAYYGVD 231
Query: 793 KFEEVTLVEDAKNEGLNRGFAFLDFSCRADALEACKRLQKMDVVFGTDRSAKVAFADTFI 972
K+E++TLVED KNEG+NRGFAFLDFS RADALEACKRLQK DVVFGTDR+A+VAFADTFI
Sbjct: 232 KYEDLTLVEDTKNEGMNRGFAFLDFSSRADALEACKRLQKRDVVFGTDRTARVAFADTFI 291
Query: 973 EPDDEIMAQVRTVFLDGLPASWDEDRASEHVKKFGKVEKVELARNMPAAKRTDFGFITFD 1152
EPDDEIM+QVRT+FLDGLPA+WDEDR +++KKFG++EK+ELARNMPAAKRTDFGF+TFD
Sbjct: 292 EPDDEIMSQVRTIFLDGLPATWDEDRVRDYLKKFGRIEKIELARNMPAAKRTDFGFVTFD 351
Query: 1153 THDAAVACVDGVNNTELGDGVKKVKVRARLSRPRQRGKSSRHAXXXXXXXXXXXXXXXTS 1332
THD+AVACVD +NN+EL DG + VKVRARLSRPRQRGKS++HA
Sbjct: 352 THDSAVACVDSINNSELVDGERLVKVRARLSRPRQRGKSAKHARGGYLVAQGSGRGFKAP 411
Query: 1333 WDSS----DSWGYAGRSGRDMQSHRTYSGGFKRPLGSRERYPITDMAPSRIDSRRRLPSS 1500
W SS DSW + GR GR MQ+ Y GG KRP+G R+R+ + +M P+R+ SRRR PS
Sbjct: 412 WGSSSSRMDSWKFTGRGGRSMQTRGAYDGGLKRPVGPRDRHSMMEMVPTRVGSRRRFPSP 471
Query: 1501 ERSYDRRSPGLAFGRSSSRREYVRTDEHYPRSSDFVDGVRPSNYVSKTRSSDFVDGVRSS 1680
E S+ RRSP + +SS++REY++ DE + R + F
Sbjct: 472 ESSFGRRSP--VYEKSSTKREYIQRDESFSRPAVF------------------------- 504
Query: 1681 NYVSKTRSSDFVTKGASEKRWSYRDAYPSRESEYLDSPQXXXXXXXXXXXXXXXXEESYG 1860
+ +E+R+ Y+D Y SR SEYLDSP ++ Y
Sbjct: 505 ------------ARDPTERRY-YKDNYSSRGSEYLDSP-PRNVSRAAGHRAPLYEDDDYD 550
Query: 1861 RHMERPSSYRGSQSHDYGSVSGSKRPHASMEEYQSRFPESTVRQSRARFDYGVSNDDIPY 2040
R++ERP++Y HDYGS+S SKR H++MEE SR+ E +R SRARFDYG SN +PY
Sbjct: 551 RYLERPTNYHDGHRHDYGSISSSKRSHSAMEEVHSRYAEPPIRHSRARFDYGGSNSGLPY 610
Query: 2041 NDRAYGSESTS-ARVGRGTHLGYERGSRSSAGHSQGVYDTHTS-SAYSRDEGRRADMGG 2211
+D YGSESTS R+GRG+ LGY+ G RSS+GHS+G+Y+T TS + Y RD+ R + G
Sbjct: 611 DDH-YGSESTSERRMGRGSRLGYDGGMRSSSGHSRGMYETRTSTTGYRRDDISRGNEEG 668
>emb|CBI34075.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 689 bits (1779), Expect = 0.0
Identities = 344/584 (58%), Positives = 426/584 (72%), Gaps = 5/584 (0%)
Frame = +1
Query: 433 HHDVMKERRKRKEFEIFVGGLDRDANEEDMRKVFSQVGEVTEVRLMKNPMTQKNKGFGFV 612
HHD++KERRKRKEFE+FVGGLDRD E+D+ F QVG++TEVRLMKN +TQKNKGF F+
Sbjct: 173 HHDLVKERRKRKEFEVFVGGLDRDVTEDDLFHFFRQVGDITEVRLMKNALTQKNKGFAFI 232
Query: 613 RFATVEQARRAINELKHPTVNGKQCGVSPSQDSDTLFVGNICKTWTKAVFREKLVHHGVD 792
RFATVEQARRA+NELKHP +NGKQCGV+PSQDSDTLFVGNICKTWTK ++KL ++GVD
Sbjct: 233 RFATVEQARRAVNELKHPVINGKQCGVAPSQDSDTLFVGNICKTWTKVAVKDKLAYYGVD 292
Query: 793 KFEEVTLVEDAKNEGLNRGFAFLDFSCRADALEACKRLQKMDVVFGTDRSAKVAFADTFI 972
K+E++TLVED KNEG+NRGFAFLDFS RADALEACKRLQK DVVFGTDR+A+VAFADTFI
Sbjct: 293 KYEDLTLVEDTKNEGMNRGFAFLDFSSRADALEACKRLQKRDVVFGTDRTARVAFADTFI 352
Query: 973 EPDDEIMAQVRTVFLDGLPASWDEDRASEHVKKFGKVEKVELARNMPAAKRTDFGFITFD 1152
EPDDEIM+QVRT+FLDGLPA+WDEDR +++KKFG++EK+ELARNMPAAKRTDFGF+TFD
Sbjct: 353 EPDDEIMSQVRTIFLDGLPATWDEDRVRDYLKKFGRIEKIELARNMPAAKRTDFGFVTFD 412
Query: 1153 THDAAVACVDGVNNTELGDGVKKVKVRARLSRPRQRGKSSRHAXXXXXXXXXXXXXXXTS 1332
THD+AVACVD +NN+EL DG + VKVRARLSRPRQRGKS++HA
Sbjct: 413 THDSAVACVDSINNSELVDGERLVKVRARLSRPRQRGKSAKHARGGYLVAQGSGRGFKAP 472
Query: 1333 WDSS----DSWGYAGRSGRDMQSHRTYSGGFKRPLGSRERYPITDMAPSRIDSRRRLPSS 1500
W SS DSW + GR GR MQ+ Y GG KRP+G R+R+ + +M P+R+ SRRR PS
Sbjct: 473 WGSSSSRMDSWKFTGRGGRSMQTRGAYDGGLKRPVGPRDRHSMMEMVPTRVGSRRRFPSP 532
Query: 1501 ERSYDRRSPGLAFGRSSSRREYVRTDEHYPRSSDFVDGVRPSNYVSKTRSSDFVDGVRSS 1680
E S+ RRSP + +SS++REY++ DE + R + F
Sbjct: 533 ESSFGRRSP--VYEKSSTKREYIQRDESFSRPAVF------------------------- 565
Query: 1681 NYVSKTRSSDFVTKGASEKRWSYRDAYPSRESEYLDSPQXXXXXXXXXXXXXXXXEESYG 1860
+ +E+R+ Y+D Y SR SEYLDSP ++ Y
Sbjct: 566 ------------ARDPTERRY-YKDNYSSRGSEYLDSP-PRNVSRAAGHRAPLYEDDDYD 611
Query: 1861 RHMERPSSYRGSQSHDYGSVSGSKRPHASMEEYQSRFPESTVRQSRARFDYGVSNDDIPY 2040
R++ERP++Y HDYGS+S SKR H++MEE SR+ E +R SRARFDYG SN +PY
Sbjct: 612 RYLERPTNYHDGHRHDYGSISSSKRSHSAMEEVHSRYAEPPIRHSRARFDYGGSNSGLPY 671
Query: 2041 NDRAYGSESTS-ARVGRGTHLGYERGSRSSAGHSQGVYDTHTSS 2169
+D YGSESTS R+GRG+ LGY+ G RSS+GHS+G+Y+T TS+
Sbjct: 672 DDH-YGSESTSERRMGRGSRLGYDGGMRSSSGHSRGMYETRTST 714
>ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232913 [Vitis vinifera]
gi|297734640|emb|CBI16691.3| unnamed protein product
[Vitis vinifera]
Length = 812
Score = 551 bits (1419), Expect = e-154
Identities = 306/598 (51%), Positives = 389/598 (65%), Gaps = 5/598 (0%)
Frame = +1
Query: 433 HHDVMKERRKRKEFEIFVGGLDRDANEEDMRKVFSQVGEVTEVRLMKNPMTQKNKGFGFV 612
HH+V KERRKRKEFE+FVGGLD+DA E+D+RKVFSQVGEVTEVRLM NP T+KNKGF F+
Sbjct: 219 HHEVFKERRKRKEFEVFVGGLDKDATEDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFL 278
Query: 613 RFATVEQARRAINELKHPTVNGKQCGVSPSQDSDTLFVGNICKTWTKAVFREKLVHHGVD 792
RFATVEQA+RA+ ELK+P VNGKQCGV+PSQDSDTLF+GNICKTWTK +EKL H+GV+
Sbjct: 279 RFATVEQAKRAVTELKNPVVNGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVE 338
Query: 793 KFEEVTLVEDAKNEGLNRGFAFLDFSCRADALEACKRLQKMDVVFGTDRSAKVAFADTFI 972
E++TLVED+ NEG+NRGFAFL+FS R+DA++A KRLQK DVVFG DR+AKV+FAD+FI
Sbjct: 339 NVEDLTLVEDSNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRTAKVSFADSFI 398
Query: 973 EPDDEIMAQVRTVFLDGLPASWDEDRASEHVKKFGKVEKVELARNMPAAKRTDFGFITFD 1152
+P DEIMAQV+TVF+DGLPASWDEDR E +KK+G++EK+ELARNMP+AKR DFGF+TFD
Sbjct: 399 DPGDEIMAQVKTVFIDGLPASWDEDRVRELLKKYGEIEKIELARNMPSAKRKDFGFVTFD 458
Query: 1153 THDAAVACVDGVNNTELGDGVKKVKVRARLSRPRQRGKSSRHAXXXXXXXXXXXXXXXT- 1329
THDAAV C +NN ELG+G K KVRARLSRP QRGK +
Sbjct: 459 THDAAVTCAKSINNAELGEGENKAKVRARLSRPLQRGKGKHISRGDFRPGRGGPVRGVRG 518
Query: 1330 SWDSSDSWGYAGRSGRDMQSHRTYSGGFKRPLGSRERYPITDMAPSRIDSRRRLPSSERS 1509
SW + GR R + R KRP+G R+R P+ M P R LP RS
Sbjct: 519 SWARPALRSFPGRGARGL-GPRLPPAAVKRPIGFRDRRPVMAMPP----RGRPLPPPSRS 573
Query: 1510 YDRRSPGLAFGRSSSRREYVRTDEHYPRSSDFVDGVRPSNYVSKTRSSDFVDGVRSSNYV 1689
YDRR+P A+ + + +R+Y R +E RS RP
Sbjct: 574 YDRRAPVPAYPKPNLKRDYGRREEVPLRS-------RP---------------------- 604
Query: 1690 SKTRSSDFVTKGASEKRWSYRDAYPSRESEYLDSPQXXXXXXXXXXXXXXXXEESYGRHM 1869
+ D+ ++ A E+R SYRD Y +R S Y D P+ +++YG+
Sbjct: 605 ----AVDYGSRVAPERRPSYRDDYATRGSGYSDIPR----NTSRTAARRTYEDDAYGQRF 656
Query: 1870 ER--PSSYRGSQSHDYGSVSGSKRPHASMEEYQSRFPESTVRQSRARFDYGVSNDDIPYN 2043
ER P SYR + DY S++GSKRP+ ++++ R+ +++VRQSRAR DY +S Y
Sbjct: 657 ERPPPPSYREGRPRDYDSIAGSKRPYGALDDVPPRYADASVRQSRARLDYEMSAGASQYG 716
Query: 2044 DRAYGSESTSARVGRGTHLGYERGSRS--SAGHSQGVYDTHTSSAYSRDEGRRADMGG 2211
D AYG R+GR ++LGY GSRS S+ S G+Y + Y +D+GG
Sbjct: 717 D-AYGD-----RLGR-SNLGY-GGSRSSMSSQDSHGLYSSRQGMGYGGGSFGGSDVGG 766
>ref|XP_002526479.1| RNA binding protein, putative [Ricinus communis]
gi|223534154|gb|EEF35870.1| RNA binding protein, putative
[Ricinus communis]
Length = 784
Score = 530 bits (1366), Expect = e-148
Identities = 301/605 (49%), Positives = 385/605 (63%), Gaps = 12/605 (1%)
Frame = +1
Query: 433 HHDVMKERRKRKEFEIFVGGLDRDANEEDMRKVFSQVGEVTEVRLMKNPMTQKNKGFGFV 612
HH+V KERRKRKEFE+FVGGLD+DA E+D+RKVF++VGEVTEVRLM NP T+KNKGF F+
Sbjct: 200 HHEVFKERRKRKEFEVFVGGLDKDATEDDLRKVFTRVGEVTEVRLMMNPQTKKNKGFAFL 259
Query: 613 RFATVEQARRAINELKHPTVNGKQCGVSPSQDSDTLFVGNICKTWTKAVFREKLVHHGVD 792
RF+TVEQA++A+ ELK+P +NGKQCGV+PSQDSDTLF+GNICKTWTK +EKL H+GV+
Sbjct: 260 RFSTVEQAKKAVTELKNPVINGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVE 319
Query: 793 KFEEVTLVEDAKNEGLNRGFAFLDFSCRADALEACKRLQKMDVVFGTDRSAKVAFADTFI 972
E+VTLVED+ NEG+NRGFAFL+FS R+DA++A KRLQK DV+FG DR AKV+FAD+FI
Sbjct: 320 NVEDVTLVEDSNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFI 379
Query: 973 EPDDEIMAQVRTVFLDGLPASWDEDRASEHVKKFGKVEKVELARNMPAAKRTDFGFITFD 1152
+P DEIMAQV+TVF+DGLPASWDEDR E +KKFG++EK+ELARNMP+AKR DFGF+TFD
Sbjct: 380 DPGDEIMAQVKTVFVDGLPASWDEDRVRELLKKFGEIEKIELARNMPSAKRKDFGFVTFD 439
Query: 1153 THDAAVACVDGVNNTELGDGVKKVKVRARLSRPRQRGKSSRHAXXXXXXXXXXXXXXXTS 1332
+HDAAV C +NN ELG+G K KVRARLSRP QRGK +HA S
Sbjct: 440 SHDAAVTCAKSINNAELGEGDNKAKVRARLSRPLQRGK-GKHA----------------S 482
Query: 1333 WDSSDSWGYAGRSGRDMQ-------SHRTYSGGFKRPLGSRERYPITDMAPSRIDSRRRL 1491
SW Y GR+ R + R KR +G R+R P P R R L
Sbjct: 483 RADFRSW-YGGRTARGPWVRPVRGIASRAAPTSVKRHVGLRDRRPPVMSMPVR---GRPL 538
Query: 1492 PSSERSYDRRSPGLAFGRSSSRREYVRTDEHYPRSSDFVDGVRPSNYVSKTRSSDFVDGV 1671
P R+YDRR+P ++ +SS +R+Y R +E P S
Sbjct: 539 PPPNRTYDRRAPAPSYPKSSLKRDYGRREELPPPRS------------------------ 574
Query: 1672 RSSNYVSKTRSSDFVTKGASEKRWSYRDAYPSRESEYLDSPQXXXXXXXXXXXXXXXXEE 1851
D+ ++ +E+R SYRD Y SR S Y D P+ ++
Sbjct: 575 --------RAPVDYSSRSVAERRQSYRDDYSSRGSGYSDIPR----GTSRSSARRAYVDD 622
Query: 1852 SYGRHMER-PSSYRGSQSHDYGSVSGSKRPHASMEEYQSRFPE--STVRQSRARFDYGVS 2022
YG+ +ER P SYR ++ DY S+SGSKRP+++M++ R+ + + R SRAR DY +
Sbjct: 623 GYGQRLERHPPSYREGRARDYDSISGSKRPYSAMDDVPPRYADGGAGTRHSRARLDYELG 682
Query: 2023 NDDIPYNDRAYGSESTSARVGRGTHLGYERGSRS--SAGHSQGVYDTHTSSAYSRDEGRR 2196
Y D AYG R+GR + +GY GSRS S+ S G+Y + Y G
Sbjct: 683 PSASQYGD-AYGD-----RIGRSS-VGY-GGSRSSLSSQDSHGLYTSRQGMGYGGSYGAN 734
Query: 2197 ADMGG 2211
D+GG
Sbjct: 735 -DVGG 738
>gb|AEV43360.1| RNA recognition motif protein 1 [Citrus sinensis]
Length = 775
Score = 521 bits (1341), Expect = e-145
Identities = 296/596 (49%), Positives = 370/596 (62%), Gaps = 3/596 (0%)
Frame = +1
Query: 433 HHDVMKERRKRKEFEIFVGGLDRDANEEDMRKVFSQVGEVTEVRLMKNPMTQKNKGFGFV 612
HH++ +ERRKRKEFE+FVGGLD+D +D+RKVFSQVGEVTEVRLM NP T+KNKGF F+
Sbjct: 184 HHEMFQERRKRKEFEVFVGGLDKDVVGDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFL 243
Query: 613 RFATVEQARRAINELKHPTVNGKQCGVSPSQDSDTLFVGNICKTWTKAVFREKLVHHGVD 792
RFATVEQAR+A+ ELK+P +NGKQCGV+PSQDSDTLF+GNICKTWTK +EKL H+GVD
Sbjct: 244 RFATVEQARQAVTELKNPVINGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVD 303
Query: 793 KFEEVTLVEDAKNEGLNRGFAFLDFSCRADALEACKRLQKMDVVFGTDRSAKVAFADTFI 972
E++TLVED+ NEG+NRGFAFL+FS R+DA++A KRLQK DV+FG DR AKV+FAD+FI
Sbjct: 304 NVEDLTLVEDSNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFI 363
Query: 973 EPDDEIMAQVRTVFLDGLPASWDEDRASEHVKKFGKVEKVELARNMPAAKRTDFGFITFD 1152
+P DEIMAQV+TVF+DGLPASWDEDR E +K +G++ K+ELARNMP+AKR DFGF+TFD
Sbjct: 364 DPGDEIMAQVKTVFVDGLPASWDEDRVRELLKNYGEITKIELARNMPSAKRKDFGFVTFD 423
Query: 1153 THDAAVACVDGVNNTELGDGVKKVKVRARLSRPRQRGKSSRHAXXXXXXXXXXXXXXXTS 1332
THDAAV C +NN ELG+G K KVRARLSRP QRGK + S
Sbjct: 424 THDAAVTCAKSINNAELGEGDNKAKVRARLSRPLQRGKGKHASRGDFRSGRGTGRATRGS 483
Query: 1333 WDSSDSWGYAGRSGRDMQSHRTYSGGFKRPLGSRERYPITDMAPSRIDSRRRLPSSERSY 1512
W GRS R + S R KRP+ R+R PI M +R P RSY
Sbjct: 484 WGLPSPRSLPGRSARGIGS-RLPPASVKRPVPVRDRRPIMSMTAR---ARPMPPPPPRSY 539
Query: 1513 DRRSPGLAFGRSSSRREYVRTDEHYPRSSDFVDGVRPSNYVSKTRSSDFVDGVRSSNYVS 1692
DRR+P ++ + +REY R DE P S P +Y S+
Sbjct: 540 DRRAPVPSYPKPGLKREYGRRDEVPPPRSR-----APVDYGSR----------------- 577
Query: 1693 KTRSSDFVTKGASEKRWSYRDAYPSRESEYLDSPQXXXXXXXXXXXXXXXXEESYGRHME 1872
R YRD Y SR S Y D P+ ++ Y + E
Sbjct: 578 -----------VVPDRRPYRDEYTSRGSGYPDMPR----STSRGAARRPYVDDGYAQRFE 622
Query: 1873 R-PSSYRGSQSHDYGSVSGSKRPHASMEEYQSRFPESTVRQSRARFDYGVSNDDIPYNDR 2049
R P SYR ++ DY +VSGSKRP++ +++ R+ + VR SRAR DY + Y D
Sbjct: 623 RPPPSYREGRARDYETVSGSKRPYSVVDDVPPRYADPGVRHSRARLDYDLGGGAPQYGD- 681
Query: 2050 AYGSESTSARVGRGTHLGYERGSRS--SAGHSQGVYDTHTSSAYSRDEGRRADMGG 2211
AYG R+GR ++LGY GSRS S+ S G+Y + Y D+GG
Sbjct: 682 AYGD-----RMGR-SNLGY-GGSRSSISSQDSHGLYSSRQGMGYGGSYS-GGDVGG 729