BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003219
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134546.1| PREDICTED: small nuclear ribonucleoprotein-a...    90   2e-16
ref|XP_002529898.1| small nuclear ribonucleoprotein-associated p...    90   3e-16
ref|XP_002529896.1| small nuclear ribonucleoprotein-associated p...    90   3e-16
ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-a...    90   3e-16
dbj|BAJ96909.1| predicted protein [Hordeum vulgare subsp. vulgare]     87   3e-15

>ref|XP_004134546.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
           B'-like [Cucumis sativus]
           gi|449490639|ref|XP_004158663.1| PREDICTED: small
           nuclear ribonucleoprotein-associated protein B'-like
           [Cucumis sativus]
          Length = 284

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 39/45 (86%), Positives = 44/45 (97%)
 Frame = -3

Query: 577 GRGIPTAPLVQAQPGLSGPVRGIGGPAPGMMQPQISRPPIPNMTA 443
           GRGIPTAPLVQAQPGL+GPVRG+GGPAPGMMQPQISRPP+P ++A
Sbjct: 113 GRGIPTAPLVQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSA 157


>ref|XP_002529898.1| small nuclear ribonucleoprotein-associated protein, putative
           [Ricinus communis] gi|223530625|gb|EEF32501.1| small
           nuclear ribonucleoprotein-associated protein, putative
           [Ricinus communis]
          Length = 275

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 38/45 (84%), Positives = 44/45 (97%)
 Frame = -3

Query: 577 GRGIPTAPLVQAQPGLSGPVRGIGGPAPGMMQPQISRPPIPNMTA 443
           GRGIPTAPL+QAQPGL+GPVRG+GGPAPGMMQPQISRPP+P ++A
Sbjct: 113 GRGIPTAPLIQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSA 157


>ref|XP_002529896.1| small nuclear ribonucleoprotein-associated protein, putative
           [Ricinus communis] gi|223530623|gb|EEF32499.1| small
           nuclear ribonucleoprotein-associated protein, putative
           [Ricinus communis]
          Length = 275

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 38/45 (84%), Positives = 44/45 (97%)
 Frame = -3

Query: 577 GRGIPTAPLVQAQPGLSGPVRGIGGPAPGMMQPQISRPPIPNMTA 443
           GRGIPTAPL+QAQPGL+GPVRG+GGPAPGMMQPQISRPP+P ++A
Sbjct: 113 GRGIPTAPLIQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSA 157


>ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'
           [Vitis vinifera] gi|147774905|emb|CAN61706.1|
           hypothetical protein VITISV_001610 [Vitis vinifera]
          Length = 276

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 38/45 (84%), Positives = 44/45 (97%)
 Frame = -3

Query: 577 GRGIPTAPLVQAQPGLSGPVRGIGGPAPGMMQPQISRPPIPNMTA 443
           GRGIPTAPL+QAQPGL+GPVRG+GGPAPGMMQPQISRPP+P ++A
Sbjct: 112 GRGIPTAPLIQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSA 156


>dbj|BAJ96909.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 264

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 37/45 (82%), Positives = 43/45 (95%)
 Frame = -3

Query: 577 GRGIPTAPLVQAQPGLSGPVRGIGGPAPGMMQPQISRPPIPNMTA 443
           GRG+ T PL+QAQPGLSGPVRG+GGPAPGMMQPQISRPP+PN++A
Sbjct: 114 GRGVATGPLLQAQPGLSGPVRGVGGPAPGMMQPQISRPPMPNLSA 158