BLASTX nr result

ID: Coptis23_contig00003211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003211
         (650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533327.1| conserved hypothetical protein [Ricinus comm...    98   1e-18
ref|NP_173170.2| peptide-O-fucosyltransferase [Arabidopsis thali...    98   2e-18
ref|XP_002892943.1| hypothetical protein ARALYDRAFT_889130 [Arab...    98   2e-18
gb|AAD50008.1|AC007651_3 Hypothetical Protein [Arabidopsis thali...    98   2e-18
ref|NP_199853.1| peptide-O-fucosyltransferase [Arabidopsis thali...    97   3e-18

>ref|XP_002533327.1| conserved hypothetical protein [Ricinus communis]
           gi|223526849|gb|EEF29063.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 565

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 46/54 (85%), Positives = 49/54 (90%)
 Frame = +3

Query: 255 LDKTISAMSTVFIGASGSTFTEDILRLRKDWRTGSVCDEYLCQGEQPNFIADTE 416
           LDKTISAMS VFIGASGSTFTEDILRLRKDW + S+CDEYLCQGE PNFIA+ E
Sbjct: 512 LDKTISAMSNVFIGASGSTFTEDILRLRKDWESASLCDEYLCQGELPNFIAEDE 565



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 33/37 (89%), Positives = 36/37 (97%)
 Frame = +2

Query: 8   IPQAANCISRMAERANTPVIYLSTDAAESETDLLQSL 118
           IPQAA+CI+R+AERAN PVIYLSTDAAESETDLLQSL
Sbjct: 435 IPQAADCIARVAERANAPVIYLSTDAAESETDLLQSL 471


>ref|NP_173170.2| peptide-O-fucosyltransferase [Arabidopsis thaliana]
           gi|27754290|gb|AAO22598.1| unknown protein [Arabidopsis
           thaliana] gi|332191445|gb|AEE29566.1|
           peptide-O-fucosyltransferase [Arabidopsis thaliana]
          Length = 564

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 45/54 (83%), Positives = 50/54 (92%)
 Frame = +3

Query: 255 LDKTISAMSTVFIGASGSTFTEDILRLRKDWRTGSVCDEYLCQGEQPNFIADTE 416
           LDKTI AMS+VFIGASGSTFTEDILRLRKDW T S+CDEYLC+GE+PNFIA+ E
Sbjct: 511 LDKTICAMSSVFIGASGSTFTEDILRLRKDWGTSSMCDEYLCRGEEPNFIAENE 564



 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 33/37 (89%), Positives = 34/37 (91%)
 Frame = +2

Query: 8   IPQAANCISRMAERANTPVIYLSTDAAESETDLLQSL 118
           IPQAA+CISRM ERAN PVIYLSTDAAESET LLQSL
Sbjct: 434 IPQAADCISRMVERANAPVIYLSTDAAESETGLLQSL 470


>ref|XP_002892943.1| hypothetical protein ARALYDRAFT_889130 [Arabidopsis lyrata subsp.
           lyrata] gi|297338785|gb|EFH69202.1| hypothetical protein
           ARALYDRAFT_889130 [Arabidopsis lyrata subsp. lyrata]
          Length = 583

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 45/54 (83%), Positives = 50/54 (92%)
 Frame = +3

Query: 255 LDKTISAMSTVFIGASGSTFTEDILRLRKDWRTGSVCDEYLCQGEQPNFIADTE 416
           LDKTI AMS+VFIGASGSTFTEDILRLRKDW T S+CDEYLC+GE+PNFIA+ E
Sbjct: 523 LDKTICAMSSVFIGASGSTFTEDILRLRKDWGTSSMCDEYLCRGEEPNFIAENE 576



 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 33/37 (89%), Positives = 34/37 (91%)
 Frame = +2

Query: 8   IPQAANCISRMAERANTPVIYLSTDAAESETDLLQSL 118
           IPQAA+CISRM ERAN PVIYLSTDAAESET LLQSL
Sbjct: 446 IPQAADCISRMVERANAPVIYLSTDAAESETGLLQSL 482


>gb|AAD50008.1|AC007651_3 Hypothetical Protein [Arabidopsis thaliana]
          Length = 594

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 45/54 (83%), Positives = 50/54 (92%)
 Frame = +3

Query: 255 LDKTISAMSTVFIGASGSTFTEDILRLRKDWRTGSVCDEYLCQGEQPNFIADTE 416
           LDKTI AMS+VFIGASGSTFTEDILRLRKDW T S+CDEYLC+GE+PNFIA+ E
Sbjct: 541 LDKTICAMSSVFIGASGSTFTEDILRLRKDWGTSSMCDEYLCRGEEPNFIAENE 594



 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 33/37 (89%), Positives = 34/37 (91%)
 Frame = +2

Query: 8   IPQAANCISRMAERANTPVIYLSTDAAESETDLLQSL 118
           IPQAA+CISRM ERAN PVIYLSTDAAESET LLQSL
Sbjct: 464 IPQAADCISRMVERANAPVIYLSTDAAESETGLLQSL 500


>ref|NP_199853.1| peptide-O-fucosyltransferase [Arabidopsis thaliana]
           gi|9758924|dbj|BAB09461.1| unnamed protein product
           [Arabidopsis thaliana] gi|133778858|gb|ABO38769.1|
           At5g50420 [Arabidopsis thaliana]
           gi|332008558|gb|AED95941.1| peptide-O-fucosyltransferase
           [Arabidopsis thaliana]
          Length = 566

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 45/54 (83%), Positives = 49/54 (90%)
 Frame = +3

Query: 255 LDKTISAMSTVFIGASGSTFTEDILRLRKDWRTGSVCDEYLCQGEQPNFIADTE 416
           LDKTI AMS+VFIGASGSTFTEDILRLRKDW T S CDEYLC+GE+PNFIA+ E
Sbjct: 513 LDKTICAMSSVFIGASGSTFTEDILRLRKDWGTSSTCDEYLCRGEEPNFIAEDE 566



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 29/37 (78%), Positives = 32/37 (86%)
 Frame = +2

Query: 8   IPQAANCISRMAERANTPVIYLSTDAAESETDLLQSL 118
           IPQAA CI+R+ ER+N  VIYLSTDAAESET LLQSL
Sbjct: 436 IPQAAECIARIVERSNGAVIYLSTDAAESETSLLQSL 472


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