BLASTX nr result

ID: Coptis23_contig00003209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003209
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524399.1| Coiled-coil domain-containing protein, putat...   319   2e-85
ref|XP_002315962.1| predicted protein [Populus trichocarpa] gi|2...   319   2e-85
emb|CBI27075.3| unnamed protein product [Vitis vinifera]              317   9e-85
ref|XP_002281301.1| PREDICTED: coiled-coil domain-containing pro...   317   9e-85
ref|XP_002311431.1| predicted protein [Populus trichocarpa] gi|2...   317   1e-84

>ref|XP_002524399.1| Coiled-coil domain-containing protein, putative [Ricinus communis]
           gi|223536360|gb|EEF38010.1| Coiled-coil
           domain-containing protein, putative [Ricinus communis]
          Length = 310

 Score =  319 bits (818), Expect = 2e-85
 Identities = 154/178 (86%), Positives = 168/178 (94%)
 Frame = +2

Query: 47  CNSMIAKGVRFNAEKKQVGNYYSTKIWSFSMKSACCKHEIVIQTDPKNCEYVIMSGAQRK 226
           CNSMIAKGVRFNAEKKQVGNYYSTKIWSF+MKSACCKHEIVIQTDPKNCEYVI+SGAQ+K
Sbjct: 61  CNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSACCKHEIVIQTDPKNCEYVIISGAQKK 120

Query: 227 TEEFDVEDAETFELPADEERGKLADPFYRLEHQEEDLQKKKEAEPLLVRLQRVSDVRHSD 406
           TE+FDVEDAETF LPADEERGKL+DPFYRLEHQEEDLQKKKEAEP++VRLQRVSD RHSD
Sbjct: 121 TEDFDVEDAETFALPADEERGKLSDPFYRLEHQEEDLQKKKEAEPVIVRLQRVSDARHSD 180

Query: 407 DYTLNKALRARLRSQKKRVAEEEAVSRRMGLGIRLLPKSEEDAATAKQVKFCSGFEKN 580
           DY LNKALRARLRSQKKRV+EEEA SR+MGLG+RLLP ++EDA TA  +KF S FE+N
Sbjct: 181 DYALNKALRARLRSQKKRVSEEEATSRKMGLGVRLLPVTKEDATTAAHMKFSSKFERN 238


>ref|XP_002315962.1| predicted protein [Populus trichocarpa] gi|222865002|gb|EEF02133.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  319 bits (818), Expect = 2e-85
 Identities = 155/178 (87%), Positives = 167/178 (93%)
 Frame = +2

Query: 47  CNSMIAKGVRFNAEKKQVGNYYSTKIWSFSMKSACCKHEIVIQTDPKNCEYVIMSGAQRK 226
           CNSMIAKGVRFNAEKKQVGNYYSTKIWSF+MKSACCKHEIVIQTDPKNCEYVI+SGAQRK
Sbjct: 61  CNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSACCKHEIVIQTDPKNCEYVIISGAQRK 120

Query: 227 TEEFDVEDAETFELPADEERGKLADPFYRLEHQEEDLQKKKEAEPLLVRLQRVSDVRHSD 406
            EEFD+EDAETF LPADEERGKLADPFYRLEHQEEDLQKKKEAEP+LVRLQRVSD RH D
Sbjct: 121 NEEFDIEDAETFALPADEERGKLADPFYRLEHQEEDLQKKKEAEPILVRLQRVSDARHLD 180

Query: 407 DYTLNKALRARLRSQKKRVAEEEAVSRRMGLGIRLLPKSEEDAATAKQVKFCSGFEKN 580
           DY+LNKALRA++RSQKKRVAEEEA S++MGLGIRLLP +EED A+A  VKF S F+KN
Sbjct: 181 DYSLNKALRAQMRSQKKRVAEEEATSKKMGLGIRLLPTTEEDGASAAHVKFSSKFDKN 238


>emb|CBI27075.3| unnamed protein product [Vitis vinifera]
          Length = 885

 Score =  317 bits (812), Expect = 9e-85
 Identities = 154/178 (86%), Positives = 169/178 (94%)
 Frame = +2

Query: 47   CNSMIAKGVRFNAEKKQVGNYYSTKIWSFSMKSACCKHEIVIQTDPKNCEYVIMSGAQRK 226
            CNSMIAKGVRFNAEKKQVGNYYSTKIWSF+MKSACCKHEIVIQTDPKNCEYVI+SGAQRK
Sbjct: 633  CNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSACCKHEIVIQTDPKNCEYVIISGAQRK 692

Query: 227  TEEFDVEDAETFELPADEERGKLADPFYRLEHQEEDLQKKKEAEPLLVRLQRVSDVRHSD 406
            TEEFD+EDAETF LPADEERGKLADPFYRLEH+ EDLQKKKEAEP+LVRLQRVSD RHSD
Sbjct: 693  TEEFDIEDAETFALPADEERGKLADPFYRLEHEGEDLQKKKEAEPVLVRLQRVSDARHSD 752

Query: 407  DYTLNKALRARLRSQKKRVAEEEAVSRRMGLGIRLLPKSEEDAATAKQVKFCSGFEKN 580
            DY+LNKALRA+LR+QKKRVAEEE VS+++GLGIRLLP +EEDAA A ++KF S FE+N
Sbjct: 753  DYSLNKALRAQLRNQKKRVAEEEFVSKKLGLGIRLLPATEEDAAIAARMKFSSKFERN 810


>ref|XP_002281301.1| PREDICTED: coiled-coil domain-containing protein 130-like [Vitis
           vinifera]
          Length = 313

 Score =  317 bits (812), Expect = 9e-85
 Identities = 154/178 (86%), Positives = 169/178 (94%)
 Frame = +2

Query: 47  CNSMIAKGVRFNAEKKQVGNYYSTKIWSFSMKSACCKHEIVIQTDPKNCEYVIMSGAQRK 226
           CNSMIAKGVRFNAEKKQVGNYYSTKIWSF+MKSACCKHEIVIQTDPKNCEYVI+SGAQRK
Sbjct: 61  CNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSACCKHEIVIQTDPKNCEYVIISGAQRK 120

Query: 227 TEEFDVEDAETFELPADEERGKLADPFYRLEHQEEDLQKKKEAEPLLVRLQRVSDVRHSD 406
           TEEFD+EDAETF LPADEERGKLADPFYRLEH+ EDLQKKKEAEP+LVRLQRVSD RHSD
Sbjct: 121 TEEFDIEDAETFALPADEERGKLADPFYRLEHEGEDLQKKKEAEPVLVRLQRVSDARHSD 180

Query: 407 DYTLNKALRARLRSQKKRVAEEEAVSRRMGLGIRLLPKSEEDAATAKQVKFCSGFEKN 580
           DY+LNKALRA+LR+QKKRVAEEE VS+++GLGIRLLP +EEDAA A ++KF S FE+N
Sbjct: 181 DYSLNKALRAQLRNQKKRVAEEEFVSKKLGLGIRLLPATEEDAAIAARMKFSSKFERN 238


>ref|XP_002311431.1| predicted protein [Populus trichocarpa] gi|222851251|gb|EEE88798.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  317 bits (811), Expect = 1e-84
 Identities = 154/178 (86%), Positives = 165/178 (92%)
 Frame = +2

Query: 47  CNSMIAKGVRFNAEKKQVGNYYSTKIWSFSMKSACCKHEIVIQTDPKNCEYVIMSGAQRK 226
           CNSMIAKGVRFNAEKKQVGNYYSTKIWSF+MKSACCKHEIVI TDPKNCEYVI+SGAQRK
Sbjct: 61  CNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSACCKHEIVIHTDPKNCEYVIISGAQRK 120

Query: 227 TEEFDVEDAETFELPADEERGKLADPFYRLEHQEEDLQKKKEAEPLLVRLQRVSDVRHSD 406
            EEFDVEDAETF LPADEE+GKL+DPFYRLEHQEEDLQKKKEAEP+LVRLQRVSD RHSD
Sbjct: 121 NEEFDVEDAETFALPADEEKGKLSDPFYRLEHQEEDLQKKKEAEPVLVRLQRVSDARHSD 180

Query: 407 DYTLNKALRARLRSQKKRVAEEEAVSRRMGLGIRLLPKSEEDAATAKQVKFCSGFEKN 580
           DY LNKALRAR+RS KKRVAEEE+ SR+MGLGIRLLP +EEDA +A  VKF S F+KN
Sbjct: 181 DYALNKALRARMRSHKKRVAEEESTSRKMGLGIRLLPATEEDAVSAAHVKFSSKFDKN 238


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