BLASTX nr result

ID: Coptis23_contig00003204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003204
         (749 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553865.1| PREDICTED: COP9 signalosome complex subunit ...    73   6e-11
ref|XP_003553864.1| PREDICTED: COP9 signalosome complex subunit ...    73   6e-11
ref|XP_003524625.1| PREDICTED: COP9 signalosome complex subunit ...    73   6e-11
ref|XP_003524624.1| PREDICTED: COP9 signalosome complex subunit ...    73   6e-11
ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit ...    71   3e-10

>ref|XP_003553865.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 2
           [Glycine max]
          Length = 425

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 37/48 (77%), Positives = 41/48 (85%)
 Frame = -2

Query: 421 GMICIGQKCLWKAHELLHNVVTSPTSTPNAISVEALKKYILVSLIQHG 278
           GMICIGQK   KA +LLHNVVT+P ST NAI+VEA KKYILVSLI+HG
Sbjct: 186 GMICIGQKHFQKALDLLHNVVTAPMSTINAIAVEAYKKYILVSLIRHG 233


>ref|XP_003553864.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 1
           [Glycine max]
          Length = 423

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 37/48 (77%), Positives = 41/48 (85%)
 Frame = -2

Query: 421 GMICIGQKCLWKAHELLHNVVTSPTSTPNAISVEALKKYILVSLIQHG 278
           GMICIGQK   KA +LLHNVVT+P ST NAI+VEA KKYILVSLI+HG
Sbjct: 184 GMICIGQKHFQKALDLLHNVVTAPMSTINAIAVEAYKKYILVSLIRHG 231


>ref|XP_003524625.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 2
           [Glycine max]
          Length = 423

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 37/48 (77%), Positives = 41/48 (85%)
 Frame = -2

Query: 421 GMICIGQKCLWKAHELLHNVVTSPTSTPNAISVEALKKYILVSLIQHG 278
           GMICIGQK   KA +LLHNVVT+P ST NAI+VEA KKYILVSLI+HG
Sbjct: 184 GMICIGQKRFQKALDLLHNVVTAPMSTINAIAVEAYKKYILVSLIRHG 231


>ref|XP_003524624.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 1
           [Glycine max]
          Length = 423

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 37/48 (77%), Positives = 41/48 (85%)
 Frame = -2

Query: 421 GMICIGQKCLWKAHELLHNVVTSPTSTPNAISVEALKKYILVSLIQHG 278
           GMICIGQK   KA +LLHNVVT+P ST NAI+VEA KKYILVSLI+HG
Sbjct: 184 GMICIGQKRFQKALDLLHNVVTAPMSTINAIAVEAYKKYILVSLIRHG 231


>ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit 3 [Vitis vinifera]
           gi|296090247|emb|CBI40066.3| unnamed protein product
           [Vitis vinifera]
          Length = 424

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 37/48 (77%), Positives = 40/48 (83%)
 Frame = -2

Query: 421 GMICIGQKCLWKAHELLHNVVTSPTSTPNAISVEALKKYILVSLIQHG 278
           GMICIGQK   KA ELLHNVVT+P ST NAI+VEA KKYILVSLI +G
Sbjct: 184 GMICIGQKRFRKALELLHNVVTAPMSTINAIAVEAYKKYILVSLIHNG 231


Top