BLASTX nr result

ID: Coptis23_contig00003197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003197
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271275.2| PREDICTED: probable methyltransferase PMT5-l...   245   2e-63
ref|XP_002512094.1| ATP binding protein, putative [Ricinus commu...   238   5e-61
ref|XP_003516353.1| PREDICTED: probable methyltransferase PMT4-l...   233   1e-59
ref|XP_003518764.1| PREDICTED: probable methyltransferase PMT4-l...   229   2e-58
ref|XP_004155297.1| PREDICTED: probable methyltransferase PMT4-l...   222   2e-56

>ref|XP_002271275.2| PREDICTED: probable methyltransferase PMT5-like [Vitis vinifera]
          Length = 620

 Score =  245 bits (626), Expect = 2e-63
 Identities = 111/141 (78%), Positives = 127/141 (90%)
 Frame = +2

Query: 2   VNCYTSRTQGGIPPLCNEDYDARSYYQPLQSCISGTTSKRWVSIQNRSSGSQLSSAELEV 181
           V+CYTSR QG +P LC E++D +SYYQPL  CISGTTSKRW+ IQNRSSG  LSS ELEV
Sbjct: 366 VHCYTSRKQGAVP-LCKEEHDTQSYYQPLIPCISGTTSKRWIPIQNRSSGFHLSSVELEV 424

Query: 182 HGVHPEDFFEDLQIWRSALKNYWSLLTPLIFSDHPKRPGDEDPLPPYNMLRNVMDLNAHF 361
           HGVHP+D+FED + WRS+L+NYWSLLTPLIFSDHPKRPGDEDPLPP+NM+RNVMD+NA +
Sbjct: 425 HGVHPDDYFEDSEFWRSSLRNYWSLLTPLIFSDHPKRPGDEDPLPPFNMIRNVMDMNARY 484

Query: 362 GGLNAAFLEAKKSVWVMNVVP 424
           GGLNAAFLEAK+SVWVMNVVP
Sbjct: 485 GGLNAAFLEAKRSVWVMNVVP 505


>ref|XP_002512094.1| ATP binding protein, putative [Ricinus communis]
           gi|223549274|gb|EEF50763.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 620

 Score =  238 bits (606), Expect = 5e-61
 Identities = 109/141 (77%), Positives = 122/141 (86%)
 Frame = +2

Query: 2   VNCYTSRTQGGIPPLCNEDYDARSYYQPLQSCISGTTSKRWVSIQNRSSGSQLSSAELEV 181
           ++CY SR     P LCNE +D   YYQPL +CISGTTSKRW+ IQN+SSG QLS  EL+V
Sbjct: 366 IHCYKSRKLDA-PALCNEGHDTPIYYQPLVTCISGTTSKRWIPIQNKSSGFQLSPDELQV 424

Query: 182 HGVHPEDFFEDLQIWRSALKNYWSLLTPLIFSDHPKRPGDEDPLPPYNMLRNVMDLNAHF 361
           HGV PEDFFEDLQ+WRSAL+NYWSLLTPLIFSDHPKRPGDEDPLPPYNM+RNVMD+NAH+
Sbjct: 425 HGVQPEDFFEDLQVWRSALRNYWSLLTPLIFSDHPKRPGDEDPLPPYNMIRNVMDMNAHY 484

Query: 362 GGLNAAFLEAKKSVWVMNVVP 424
           GGLN AFLE +KSVWVMNVVP
Sbjct: 485 GGLNTAFLEERKSVWVMNVVP 505


>ref|XP_003516353.1| PREDICTED: probable methyltransferase PMT4-like [Glycine max]
          Length = 623

 Score =  233 bits (594), Expect = 1e-59
 Identities = 111/144 (77%), Positives = 125/144 (86%), Gaps = 3/144 (2%)
 Frame = +2

Query: 2   VNCYTSRTQGGIPPLCNEDYDARSYYQPLQSCISGTTSKRWVSIQNRSSGSQLSSAELEV 181
           VNCY  R +  IP LC ED DA+SYY+PLQ CISGT+SKRW++IQNRSSGS+LSSAEL++
Sbjct: 366 VNCYAYRKKHAIP-LCKEDDDAQSYYRPLQPCISGTSSKRWIAIQNRSSGSELSSAELKI 424

Query: 182 HG---VHPEDFFEDLQIWRSALKNYWSLLTPLIFSDHPKRPGDEDPLPPYNMLRNVMDLN 352
           +G   V PEDFFEDLQ WRSALKNYWSLLTPLIFSDHPKRPGDEDPLPP+NM+RNVMD++
Sbjct: 425 NGKYCVQPEDFFEDLQFWRSALKNYWSLLTPLIFSDHPKRPGDEDPLPPFNMIRNVMDMS 484

Query: 353 AHFGGLNAAFLEAKKSVWVMNVVP 424
             FGGLN A LE KKSVWVMNVVP
Sbjct: 485 TKFGGLNTALLEEKKSVWVMNVVP 508


>ref|XP_003518764.1| PREDICTED: probable methyltransferase PMT4-like [Glycine max]
          Length = 623

 Score =  229 bits (583), Expect = 2e-58
 Identities = 109/144 (75%), Positives = 124/144 (86%), Gaps = 3/144 (2%)
 Frame = +2

Query: 2   VNCYTSRTQGGIPPLCNEDYDARSYYQPLQSCISGTTSKRWVSIQNRSSGSQLSSAELEV 181
           VNCY SR +  IP LC ED DA+SYY+PLQ CISGT+SKRW++IQNRSSG +LSSAEL++
Sbjct: 366 VNCYESRKKHAIP-LCKEDDDAQSYYRPLQPCISGTSSKRWIAIQNRSSGYELSSAELKM 424

Query: 182 HG---VHPEDFFEDLQIWRSALKNYWSLLTPLIFSDHPKRPGDEDPLPPYNMLRNVMDLN 352
           +G   V PEDFFEDLQ WRSALKNYWSLLTPLIFSDHPKRPGDEDPLPP+NM+RNVMD++
Sbjct: 425 NGKYCVQPEDFFEDLQFWRSALKNYWSLLTPLIFSDHPKRPGDEDPLPPFNMMRNVMDMS 484

Query: 353 AHFGGLNAAFLEAKKSVWVMNVVP 424
             +GGLN A LE  KSVWVMNVVP
Sbjct: 485 TKYGGLNTALLEENKSVWVMNVVP 508


>ref|XP_004155297.1| PREDICTED: probable methyltransferase PMT4-like [Cucumis sativus]
          Length = 653

 Score =  222 bits (566), Expect = 2e-56
 Identities = 107/147 (72%), Positives = 121/147 (82%), Gaps = 7/147 (4%)
 Frame = +2

Query: 5   NCYTSRTQGGIPPLCNEDYDARSYYQPLQSCISGTTSKRWVSIQNRSSGSQLSSAELEVH 184
           +CY SR Q  + PLC E +D  SYYQPL  CIS TTSKRW+ I NRSSGS LSSAELEVH
Sbjct: 396 HCYFSRKQE-VVPLCKEAHDTPSYYQPLVPCISSTTSKRWIPIYNRSSGSHLSSAELEVH 454

Query: 185 G-------VHPEDFFEDLQIWRSALKNYWSLLTPLIFSDHPKRPGDEDPLPPYNMLRNVM 343
           G       V  ED+ ++LQIW+SALKNYWSLLTPLIFSDHPKRPGDEDPLPP+NM+RNVM
Sbjct: 455 GKYSSVDSVQSEDYSDELQIWQSALKNYWSLLTPLIFSDHPKRPGDEDPLPPFNMIRNVM 514

Query: 344 DLNAHFGGLNAAFLEAKKSVWVMNVVP 424
           D+NAH+GGLNAAF+E KK+VWVMNVVP
Sbjct: 515 DMNAHYGGLNAAFVEQKKTVWVMNVVP 541


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