BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003193
         (1526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96073.1| unknown [Populus trichocarpa]                          543   e-177
ref|XP_002327033.1| predicted protein [Populus trichocarpa] gi|2...   540   e-176
ref|XP_003520424.1| PREDICTED: glycyl-tRNA synthetase 2, chlorop...   536   e-172
ref|XP_004140508.1| PREDICTED: glycine--tRNA ligase 2, chloropla...   526   e-171
ref|XP_004166648.1| PREDICTED: glycine--tRNA ligase 2, chloropla...   526   e-171

>gb|ABK96073.1| unknown [Populus trichocarpa]
          Length = 512

 Score =  543 bits (1398), Expect(2) = e-177
 Identities = 267/367 (72%), Positives = 318/367 (86%)
 Frame = -2

Query: 1249 RARYEDANFFYEMDLRKNFYDFRSHLKGVLFHEKLGTMLDKMTRVQNTVTKLSLAFGLNK 1070
            RARYEDA FFYEMD RK F +FR+ L G+LFHEKLGTMLDKM RV+N +TKL++  G+N+
Sbjct: 146  RARYEDAKFFYEMDTRKKFSEFRNQLDGILFHEKLGTMLDKMMRVENVITKLTVELGVNE 205

Query: 1069 DQLQVVQGAAMLAMADLSTAVVTEFTSLSGIMARHYALKDGYSEQIAEALFEIMLPRFSG 890
            D +QVVQ AA LAM+DL+TAVVTEFT+LSGIMARHYAL++GYS QIAEAL EI LPRFSG
Sbjct: 206  DVIQVVQDAASLAMSDLATAVVTEFTALSGIMARHYALREGYSAQIAEALLEITLPRFSG 265

Query: 889  DILPKTDPGIVLAIADRLDTLVGLFGVGCQPTSTNDPLGLRRISYGLVQILVENDKNLDI 710
            D++PKTD GIVLAIADRLD+LVGLF  GCQP+S NDP GLRRISYGLVQILV+NDKNLD+
Sbjct: 266  DMVPKTDAGIVLAIADRLDSLVGLFAAGCQPSSANDPFGLRRISYGLVQILVDNDKNLDL 325

Query: 709  RSSLEVAAEVQPIQVDHTVVDNVHQFVTRRLEQYLVDKGISPEVVRSILLERSNFPCLAT 530
              +L +AA+VQPI+ D +++++VH FVTRRLEQ+LVDKGI PE+VRS+L ER++ PCLA 
Sbjct: 326  VRALRLAADVQPIKADVSMINDVHLFVTRRLEQFLVDKGIRPEIVRSVLAERASSPCLAA 385

Query: 529  KSAIKMEALSRGELFPKVVEAYSRPTRIIRGKSLNADVEVSEAVFETREERDLWSAFLEV 350
            K+A KMEALSR  LFPKVVEAYSRPTRI+RGK ++ D++V EA FET EER LWS F   
Sbjct: 386  KTAYKMEALSRENLFPKVVEAYSRPTRIVRGKDVDTDMKVDEAAFETDEERALWSTFTST 445

Query: 349  KNKVHPGIEVDDFVEASSQLLQPLDSFFNHVFVMVEDERVRMNRLALLKNIADLPKGIAD 170
            K+K++PGIE+D+FVE SS+LLQPL+ FFN+VFVMVEDER+R NRLALL  IADLP+GIAD
Sbjct: 446  KSKIYPGIEIDEFVEISSELLQPLEDFFNNVFVMVEDERIRKNRLALLNKIADLPRGIAD 505

Query: 169  LSVLPGF 149
            LSVLPGF
Sbjct: 506  LSVLPGF 512



 Score =  106 bits (265), Expect(2) = e-177
 Identities = 52/63 (82%), Positives = 56/63 (88%)
 Frame = -1

Query: 1526 GEFNESFLELPEDLLIMVMQKHQKYFSIRDDDGRLLPYFIAVANGMINPTVVRKGNEAVL 1347
            G+F ESFLELPEDLL MVMQKHQKYF+I DD GRLLP+FIAVANG IN TVV+KGNEAVL
Sbjct: 86   GKFKESFLELPEDLLTMVMQKHQKYFAITDDSGRLLPFFIAVANGAINETVVKKGNEAVL 145

Query: 1346 RFR 1338
            R R
Sbjct: 146  RAR 148


>ref|XP_002327033.1| predicted protein [Populus trichocarpa] gi|222835348|gb|EEE73783.1|
            predicted protein [Populus trichocarpa]
          Length = 512

 Score =  540 bits (1392), Expect(2) = e-176
 Identities = 266/367 (72%), Positives = 317/367 (86%)
 Frame = -2

Query: 1249 RARYEDANFFYEMDLRKNFYDFRSHLKGVLFHEKLGTMLDKMTRVQNTVTKLSLAFGLNK 1070
            RARYEDA FFYEMD RK F +FR+ L G+LFHEKLGTMLDKM RV+N +TKL++  G+N+
Sbjct: 146  RARYEDAKFFYEMDTRKKFSEFRNQLNGILFHEKLGTMLDKMMRVENMITKLTVELGVNE 205

Query: 1069 DQLQVVQGAAMLAMADLSTAVVTEFTSLSGIMARHYALKDGYSEQIAEALFEIMLPRFSG 890
            D +QVVQ AA LAM+DL+TAVVTEFT+LSGIMARHYAL++GYS QIAEAL EI LPRFSG
Sbjct: 206  DVIQVVQDAASLAMSDLATAVVTEFTALSGIMARHYALREGYSAQIAEALLEITLPRFSG 265

Query: 889  DILPKTDPGIVLAIADRLDTLVGLFGVGCQPTSTNDPLGLRRISYGLVQILVENDKNLDI 710
            D++PKTD GIVLAIADRLD+LVGLF  GCQP+S NDP GLRRISY LVQILV+NDKNLD+
Sbjct: 266  DMVPKTDAGIVLAIADRLDSLVGLFAAGCQPSSANDPFGLRRISYALVQILVDNDKNLDL 325

Query: 709  RSSLEVAAEVQPIQVDHTVVDNVHQFVTRRLEQYLVDKGISPEVVRSILLERSNFPCLAT 530
              +L +AA+VQPI+ D +++++VH FVTRRLEQ+LVDKGI PE+VRS+L ER++ PCLA 
Sbjct: 326  VRALRLAADVQPIKADVSMINDVHLFVTRRLEQFLVDKGIRPEIVRSVLAERASSPCLAA 385

Query: 529  KSAIKMEALSRGELFPKVVEAYSRPTRIIRGKSLNADVEVSEAVFETREERDLWSAFLEV 350
            K+A KMEALSR  LFPKVVEAYSRPTRI+RGK ++ D++V EA FET EER LWS F   
Sbjct: 386  KTAYKMEALSRENLFPKVVEAYSRPTRIVRGKDVDTDMKVDEAAFETDEERALWSTFTST 445

Query: 349  KNKVHPGIEVDDFVEASSQLLQPLDSFFNHVFVMVEDERVRMNRLALLKNIADLPKGIAD 170
            K+K++PGIE+D+FVE SS+LLQPL+ FFN+VFVMVEDER+R NRLALL  IADLP+GIAD
Sbjct: 446  KSKIYPGIEIDEFVEISSELLQPLEDFFNNVFVMVEDERIRKNRLALLNKIADLPRGIAD 505

Query: 169  LSVLPGF 149
            LSVLPGF
Sbjct: 506  LSVLPGF 512



 Score =  106 bits (265), Expect(2) = e-176
 Identities = 52/63 (82%), Positives = 56/63 (88%)
 Frame = -1

Query: 1526 GEFNESFLELPEDLLIMVMQKHQKYFSIRDDDGRLLPYFIAVANGMINPTVVRKGNEAVL 1347
            G+F ESFLELPEDLL MVMQKHQKYF+I DD GRLLP+FIAVANG IN TVV+KGNEAVL
Sbjct: 86   GKFKESFLELPEDLLTMVMQKHQKYFAITDDSGRLLPFFIAVANGAINETVVKKGNEAVL 145

Query: 1346 RFR 1338
            R R
Sbjct: 146  RAR 148


>ref|XP_003520424.1| PREDICTED: glycyl-tRNA synthetase 2, chloroplastic/mitochondrial-like
            [Glycine max]
          Length = 1074

 Score =  536 bits (1380), Expect(2) = e-172
 Identities = 266/367 (72%), Positives = 312/367 (85%)
 Frame = -2

Query: 1249 RARYEDANFFYEMDLRKNFYDFRSHLKGVLFHEKLGTMLDKMTRVQNTVTKLSLAFGLNK 1070
            RARYEDA FFYEMD RK F +FR  LK +LFHEKLGTMLDKMTRV+N VTKLS    +N+
Sbjct: 708  RARYEDAKFFYEMDTRKRFSEFRKQLKNILFHEKLGTMLDKMTRVENMVTKLSCLLDINE 767

Query: 1069 DQLQVVQGAAMLAMADLSTAVVTEFTSLSGIMARHYALKDGYSEQIAEALFEIMLPRFSG 890
            D  Q+++ A+ LAM+DL+TAVVTEFTSLSGIM RHYAL+DGYSEQIAEAL EI LPRFSG
Sbjct: 768  DVQQIIRDASSLAMSDLATAVVTEFTSLSGIMGRHYALRDGYSEQIAEALLEITLPRFSG 827

Query: 889  DILPKTDPGIVLAIADRLDTLVGLFGVGCQPTSTNDPLGLRRISYGLVQILVENDKNLDI 710
            DILPK+D GIVLAIADRLD+L+GLF  GCQP+STNDP GLRRISYGLVQ+LVE +KNLD 
Sbjct: 828  DILPKSDAGIVLAIADRLDSLLGLFTAGCQPSSTNDPFGLRRISYGLVQLLVEKNKNLDF 887

Query: 709  RSSLEVAAEVQPIQVDHTVVDNVHQFVTRRLEQYLVDKGISPEVVRSILLERSNFPCLAT 530
            + +LE+AA+VQ I+VD  V+D+VHQFVTRRLEQ+LVDKG++ E VRSIL+ER+NFPCLA 
Sbjct: 888  KKALELAADVQSIKVDPHVIDDVHQFVTRRLEQFLVDKGVNAEFVRSILVERANFPCLAA 947

Query: 529  KSAIKMEALSRGELFPKVVEAYSRPTRIIRGKSLNADVEVSEAVFETREERDLWSAFLEV 350
            KSA KME LS+G LFPKVVEAYSRPTRI+RGK     +EV E  F T EER LWS FL V
Sbjct: 948  KSAYKMEELSKGNLFPKVVEAYSRPTRIVRGKEDELHMEVDETAFVTNEERVLWSTFLSV 1007

Query: 349  KNKVHPGIEVDDFVEASSQLLQPLDSFFNHVFVMVEDERVRMNRLALLKNIADLPKGIAD 170
            K  V+PG+ +DDFVE S QL+QPL+ FFN+VFVMV+D+++R+NRLALLK IA+LPKGIAD
Sbjct: 1008 KKSVNPGLGIDDFVEISCQLIQPLEDFFNNVFVMVDDDKIRVNRLALLKGIAELPKGIAD 1067

Query: 169  LSVLPGF 149
            L+VLPGF
Sbjct: 1068 LTVLPGF 1074



 Score = 96.3 bits (238), Expect(2) = e-172
 Identities = 45/63 (71%), Positives = 55/63 (87%)
 Frame = -1

Query: 1526 GEFNESFLELPEDLLIMVMQKHQKYFSIRDDDGRLLPYFIAVANGMINPTVVRKGNEAVL 1347
            G+F E+FL+LP+DLL MVMQKHQKYF++ D +G+LLPYF+AVANG I+ T VRKGNEAVL
Sbjct: 648  GKFKETFLDLPKDLLTMVMQKHQKYFAVCDANGQLLPYFVAVANGAIDETTVRKGNEAVL 707

Query: 1346 RFR 1338
            R R
Sbjct: 708  RAR 710


>ref|XP_004140508.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
            [Cucumis sativus]
          Length = 1068

 Score =  526 bits (1354), Expect(2) = e-171
 Identities = 256/367 (69%), Positives = 312/367 (85%)
 Frame = -2

Query: 1249 RARYEDANFFYEMDLRKNFYDFRSHLKGVLFHEKLGTMLDKMTRVQNTVTKLSLAFGLNK 1070
            RARYEDA FFYE D  K F  FR+ L G+LFHEKLG+MLDKMTR++  V  LSLA G+++
Sbjct: 702  RARYEDAKFFYETDTSKKFSQFRNQLSGILFHEKLGSMLDKMTRMEAIVVNLSLAIGISQ 761

Query: 1069 DQLQVVQGAAMLAMADLSTAVVTEFTSLSGIMARHYALKDGYSEQIAEALFEIMLPRFSG 890
            D +Q++  AA LAM+DL+TAVVTEFTSL+GIM RHYAL++G+SE+IA+ALFEI LPRFSG
Sbjct: 762  DLIQIILEAASLAMSDLATAVVTEFTSLAGIMGRHYALREGFSEEIADALFEITLPRFSG 821

Query: 889  DILPKTDPGIVLAIADRLDTLVGLFGVGCQPTSTNDPLGLRRISYGLVQILVENDKNLDI 710
            DILP++D GIVLA+ADRLD+LVGLF  GCQP+ST+DP GLRRISYGLVQILVE DKNLD+
Sbjct: 822  DILPRSDVGIVLAVADRLDSLVGLFAAGCQPSSTSDPFGLRRISYGLVQILVEKDKNLDL 881

Query: 709  RSSLEVAAEVQPIQVDHTVVDNVHQFVTRRLEQYLVDKGISPEVVRSILLERSNFPCLAT 530
              +L +AA+ QP++VD  V+DNV  FVTRRLEQ+LVDKG+SPE+VRS+L ERSNFPCLA 
Sbjct: 882  GRALRLAADNQPVKVDTNVIDNVKLFVTRRLEQFLVDKGLSPEIVRSVLAERSNFPCLAA 941

Query: 529  KSAIKMEALSRGELFPKVVEAYSRPTRIIRGKSLNADVEVSEAVFETREERDLWSAFLEV 350
            K+A KM A+S+G+LFPK++EAY+RPTRII GK ++  +EV EA FE+ EER LW+ FL +
Sbjct: 942  KTAHKMNAMSKGDLFPKIIEAYARPTRIISGKDVDNAIEVDEANFESNEERALWNTFLSI 1001

Query: 349  KNKVHPGIEVDDFVEASSQLLQPLDSFFNHVFVMVEDERVRMNRLALLKNIADLPKGIAD 170
            KNKVHPGIEVD+F E SS+L+QPL+ FF HVFVMVEDE++R NRLALLK IADLP GIAD
Sbjct: 1002 KNKVHPGIEVDEFFEISSKLIQPLEDFFEHVFVMVEDEKIRKNRLALLKRIADLPSGIAD 1061

Query: 169  LSVLPGF 149
            LS+L GF
Sbjct: 1062 LSLLSGF 1068



 Score =  104 bits (260), Expect(2) = e-171
 Identities = 51/63 (80%), Positives = 57/63 (90%)
 Frame = -1

Query: 1526 GEFNESFLELPEDLLIMVMQKHQKYFSIRDDDGRLLPYFIAVANGMINPTVVRKGNEAVL 1347
            G+FN+SFLELPEDLL MVMQKHQKYFSIR+ DG+L+PYFIAVANG I+  VVRKGNEAVL
Sbjct: 642  GKFNDSFLELPEDLLTMVMQKHQKYFSIRNADGKLMPYFIAVANGEIDDKVVRKGNEAVL 701

Query: 1346 RFR 1338
            R R
Sbjct: 702  RAR 704


>ref|XP_004166648.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like,
            partial [Cucumis sativus]
          Length = 534

 Score =  526 bits (1354), Expect(2) = e-171
 Identities = 256/367 (69%), Positives = 312/367 (85%)
 Frame = -2

Query: 1249 RARYEDANFFYEMDLRKNFYDFRSHLKGVLFHEKLGTMLDKMTRVQNTVTKLSLAFGLNK 1070
            RARYEDA FFYE D  K F  FR+ L G+LFHEKLG+MLDKMTR++  V  LSLA G+++
Sbjct: 168  RARYEDAKFFYETDTSKKFSQFRNQLSGILFHEKLGSMLDKMTRMEAIVVNLSLAIGISQ 227

Query: 1069 DQLQVVQGAAMLAMADLSTAVVTEFTSLSGIMARHYALKDGYSEQIAEALFEIMLPRFSG 890
            D +Q++  AA LAM+DL+TAVVTEFTSL+GIM RHYAL++G+SE+IA+ALFEI LPRFSG
Sbjct: 228  DLIQIILEAASLAMSDLATAVVTEFTSLAGIMGRHYALREGFSEEIADALFEITLPRFSG 287

Query: 889  DILPKTDPGIVLAIADRLDTLVGLFGVGCQPTSTNDPLGLRRISYGLVQILVENDKNLDI 710
            DILP++D GIVLA+ADRLD+LVGLF  GCQP+ST+DP GLRRISYGLVQILVE DKNLD+
Sbjct: 288  DILPRSDVGIVLAVADRLDSLVGLFAAGCQPSSTSDPFGLRRISYGLVQILVEKDKNLDL 347

Query: 709  RSSLEVAAEVQPIQVDHTVVDNVHQFVTRRLEQYLVDKGISPEVVRSILLERSNFPCLAT 530
              +L +AA+ QP++VD  V+DNV  FVTRRLEQ+LVDKG+SPE+VRS+L ERSNFPCLA 
Sbjct: 348  GRALRLAADNQPVKVDTNVIDNVKLFVTRRLEQFLVDKGLSPEIVRSVLAERSNFPCLAA 407

Query: 529  KSAIKMEALSRGELFPKVVEAYSRPTRIIRGKSLNADVEVSEAVFETREERDLWSAFLEV 350
            K+A KM A+S+G+LFPK++EAY+RPTRII GK ++  +EV EA FE+ EER LW+ FL +
Sbjct: 408  KTAHKMNAMSKGDLFPKIIEAYARPTRIISGKDVDNAIEVDEANFESNEERALWNTFLSI 467

Query: 349  KNKVHPGIEVDDFVEASSQLLQPLDSFFNHVFVMVEDERVRMNRLALLKNIADLPKGIAD 170
            KNKVHPGIEVD+F E SS+L+QPL+ FF HVFVMVEDE++R NRLALLK IADLP GIAD
Sbjct: 468  KNKVHPGIEVDEFFEISSKLIQPLEDFFEHVFVMVEDEKIRKNRLALLKRIADLPSGIAD 527

Query: 169  LSVLPGF 149
            LS+L GF
Sbjct: 528  LSLLSGF 534



 Score =  104 bits (260), Expect(2) = e-171
 Identities = 51/63 (80%), Positives = 57/63 (90%)
 Frame = -1

Query: 1526 GEFNESFLELPEDLLIMVMQKHQKYFSIRDDDGRLLPYFIAVANGMINPTVVRKGNEAVL 1347
            G+FN+SFLELPEDLL MVMQKHQKYFSIR+ DG+L+PYFIAVANG I+  VVRKGNEAVL
Sbjct: 108  GKFNDSFLELPEDLLTMVMQKHQKYFSIRNADGKLMPYFIAVANGEIDDKVVRKGNEAVL 167

Query: 1346 RFR 1338
            R R
Sbjct: 168  RAR 170